| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is marR [C]
Identifier: 89054764
GI number: 89054764
Start: 2279714
End: 2280193
Strand: Reverse
Name: marR [C]
Synonym: Jann_2273
Alternate gene names: 89054764
Gene position: 2280193-2279714 (Counterclockwise)
Preceding gene: 89054778
Following gene: 89054763
Centisome position: 52.81
GC content: 59.38
Gene sequence:
>480_bases GTGAGCCACGACCATTCAGCCCCGACACCAAGACCTCGGCGCCCATTGGAAGACCGCGTGTCGTTTCTGACCCACAGGAT CAACGCGCGGTTGCAGCAGTTGAGCACGCCGATCCTGACACCGCTGAAGCTCGACCTCTATTCGTCCCGGATCATCGTGG CGCTGGCCGAGCGGGGACCACTGAAAGTTGGACAATTGGTCGATCTCATGGCCCTGCCCCAATCCACGATGTCCCATCAG TTGAAGCGAATGGAGAAAGACGGCTACGTGCAGCGCACGCGTTCGGACACGGATAACCGCACGGTTGTCATCACGCTGAC GGACGAGGGTGAAACGGTGTCGGAGACCTGTAATCGCTGGAGCGATCAGGTGCTGAATTCGGTGTCCGAGGAATTGTCCG ACAGTGAGATCGAAGCGCTGAGCGCCCTGTTACAGCGCGTCTTTAAGAGCCTCCCGCAGGAGGGTGACATCCAGCTCTGA
Upstream 100 bases:
>100_bases ATTGCGTTTTGAATATGATCGATATCAATGTATCTAGTCAACGCGCTGGGATTTGGAAACGCAACCGTTTATGCGAGGGT GCAACCAAGGAGAACGCGCT
Downstream 100 bases:
>100_bases ACCAGCTCCAAGAAGTATTGTTGCCAATAAGATCAATATGAATGTAACGTTCCTCCGAAGCATTTGGCCTGGGGAGGCGC GCATTGGCTTGGCCGCATAT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSHDHSAPTPRPRRPLEDRVSFLTHRINARLQQLSTPILTPLKLDLYSSRIIVALAERGPLKVGQLVDLMALPQSTMSHQ LKRMEKDGYVQRTRSDTDNRTVVITLTDEGETVSETCNRWSDQVLNSVSEELSDSEIEALSALLQRVFKSLPQEGDIQL
Sequences:
>Translated_159_residues MSHDHSAPTPRPRRPLEDRVSFLTHRINARLQQLSTPILTPLKLDLYSSRIIVALAERGPLKVGQLVDLMALPQSTMSHQ LKRMEKDGYVQRTRSDTDNRTVVITLTDEGETVSETCNRWSDQVLNSVSEELSDSEIEALSALLQRVFKSLPQEGDIQL >Mature_158_residues SHDHSAPTPRPRRPLEDRVSFLTHRINARLQQLSTPILTPLKLDLYSSRIIVALAERGPLKVGQLVDLMALPQSTMSHQL KRMEKDGYVQRTRSDTDNRTVVITLTDEGETVSETCNRWSDQVLNSVSEELSDSEIEALSALLQRVFKSLPQEGDIQL
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17976; Mature: 17844
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHDHSAPTPRPRRPLEDRVSFLTHRINARLQQLSTPILTPLKLDLYSSRIIVALAERGP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEEEECCCCC LKVGQLVDLMALPQSTMSHQLKRMEKDGYVQRTRSDTDNRTVVITLTDEGETVSETCNRW CCHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHH SDQVLNSVSEELSDSEIEALSALLQRVFKSLPQEGDIQL HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SHDHSAPTPRPRRPLEDRVSFLTHRINARLQQLSTPILTPLKLDLYSSRIIVALAERGP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEEEECCCCC LKVGQLVDLMALPQSTMSHQLKRMEKDGYVQRTRSDTDNRTVVITLTDEGETVSETCNRW CCHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHH SDQVLNSVSEELSDSEIEALSALLQRVFKSLPQEGDIQL HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA