| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054751
Identifier: 89054751
GI number: 89054751
Start: 2268617
End: 2269183
Strand: Direct
Name: 89054751
Synonym: Jann_2260
Alternate gene names: NA
Gene position: 2268617-2269183 (Clockwise)
Preceding gene: 89054750
Following gene: 89054752
Centisome position: 52.54
GC content: 60.67
Gene sequence:
>567_bases ATGGCAGATATCCCCGAAGGCCTGCTGATCATGCAAGCGGAACGCGCCTACATTGCGGTGCGCGCCTGGCTTGATCCAGA CGGAAACGAGCTTGCCGAAAGGGGGATCGAGCTGTTCGATACCGCATTCGACAGCCCGGAAGCGCGGGATGGTTTCCGGG CGGTTGTGCGGTCGAAAACCGGCAACAAGGAGTTGGAAGAGATTATCGGGCACGTCGTTATTTTCGAGCCCACCACCTCA AACGCAGCGGCGTATCCGAGTGTCTGTGTGTTCCGCACCGAGATCGGCGGATCGATGTTCGTCGCCCGCGATATGCGACA TATGGTGACGCTTATCCCGCCAGCCGATGGCGTCTTCACCTTCGGGACGGGGGCCTTGCTGGACGCCTTCCACGCCAGCT ACCCCAATCCCACGATCGACCCCAGTCTCCTCAGCGCCGAGGCGCTGGTCGCTGTGCCGTCAGCGCTGACAATCACCAAG GATGTTCTGGAAGACGACGAGGTCGGCAACTCGGCAGATTACGGCGATTCCGCGGATTATGGCAGTTCCGCCGACTTCGG TGGATGA
Upstream 100 bases:
>100_bases GGCCCGACGAGCGGCTTCTTCGCCTGCTGCGTCAGTTTACCCTCAATGATGAACGAGCGCTCACCATACTTGGGCGCAGC TATGAGATGGAGTTTTAGAG
Downstream 100 bases:
>100_bases CCGCCCCGCGTGCGTCAGACGCAGGGTCGCCCGGCTCCATCGCCCGAAAAACGTGGGCGCACCGCACGTGCCAGCCGGAG TTCACGTATCGTCGACTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MADIPEGLLIMQAERAYIAVRAWLDPDGNELAERGIELFDTAFDSPEARDGFRAVVRSKTGNKELEEIIGHVVIFEPTTS NAAAYPSVCVFRTEIGGSMFVARDMRHMVTLIPPADGVFTFGTGALLDAFHASYPNPTIDPSLLSAEALVAVPSALTITK DVLEDDEVGNSADYGDSADYGSSADFGG
Sequences:
>Translated_188_residues MADIPEGLLIMQAERAYIAVRAWLDPDGNELAERGIELFDTAFDSPEARDGFRAVVRSKTGNKELEEIIGHVVIFEPTTS NAAAYPSVCVFRTEIGGSMFVARDMRHMVTLIPPADGVFTFGTGALLDAFHASYPNPTIDPSLLSAEALVAVPSALTITK DVLEDDEVGNSADYGDSADYGSSADFGG >Mature_187_residues ADIPEGLLIMQAERAYIAVRAWLDPDGNELAERGIELFDTAFDSPEARDGFRAVVRSKTGNKELEEIIGHVVIFEPTTSN AAAYPSVCVFRTEIGGSMFVARDMRHMVTLIPPADGVFTFGTGALLDAFHASYPNPTIDPSLLSAEALVAVPSALTITKD VLEDDEVGNSADYGDSADYGSSADFGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20064; Mature: 19932
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIPEGLLIMQAERAYIAVRAWLDPDGNELAERGIELFDTAFDSPEARDGFRAVVRSKT CCCCCCCEEEEEECCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC GNKELEEIIGHVVIFEPTTSNAAAYPSVCVFRTEIGGSMFVARDMRHMVTLIPPADGVFT CCHHHHHHHCEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHEEEECCCCCEEE FGTGALLDAFHASYPNPTIDPSLLSAEALVAVPSALTITKDVLEDDEVGNSADYGDSADY CCCHHHHHHHHHCCCCCCCCHHHHCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCC GSSADFGG CCCCCCCC >Mature Secondary Structure ADIPEGLLIMQAERAYIAVRAWLDPDGNELAERGIELFDTAFDSPEARDGFRAVVRSKT CCCCCCEEEEEECCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC GNKELEEIIGHVVIFEPTTSNAAAYPSVCVFRTEIGGSMFVARDMRHMVTLIPPADGVFT CCHHHHHHHCEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHEEEECCCCCEEE FGTGALLDAFHASYPNPTIDPSLLSAEALVAVPSALTITKDVLEDDEVGNSADYGDSADY CCCHHHHHHHHHCCCCCCCCHHHHCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCC GSSADFGG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA