| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054750
Identifier: 89054750
GI number: 89054750
Start: 2266290
End: 2268614
Strand: Direct
Name: 89054750
Synonym: Jann_2259
Alternate gene names: NA
Gene position: 2266290-2268614 (Clockwise)
Preceding gene: 89054749
Following gene: 89054751
Centisome position: 52.48
GC content: 60.43
Gene sequence:
>2325_bases ATGCCGAATGATCCGTTGAATGCACAGACCATCAGCGATGACGCGATGTTCGCCGCGCGCGCATATATCGTCGAAAATCA ACGCTATCCCGATCCAGCACTGCCCCATCCTGCGCCCGGGCTTGCGGCCGTTCTGAGCCGTATAAAGGGACGCTATCTGT TTCCGGTTCGATCCACGCTGGCCGCCGCCCAGTCCAGGGCCATCTTGCCCGACACAAGGGCCTATGTGACGCTTCGGGTC GATCCTGTCTTGGGCAAGATCTCGGGCGACCTTCATGCGGATATCCAACGCAAGACATGGCGTTTGTCGTGGCAAAGCGT GAGCTTGTTTCATATTGACGCGCCAGTGGGGGTGGATGCCGCGACCTGGGCTGCCAGCGGCTGGACCCTGTTTGGCATCT GCGATCTTGCCGCAAGTGGCCTGACCGAGCCGTCCGGCAACACGCTGGCACTGGCCCTTCGGATCGCCAGTGACGACACC ATCGAGGCCTGTCGCATCATCGAGACCCGGCCCAACGGGTCAATATCGCGCGACCTGACCATGACGCGGACCCCGAACAA GACGCACGACCTGGCCTACCGCGATCTGACCCCGATTCATCTGGCAGATGCCGATCTTGAAGCCGATCCGGCGATGAACG CGATCACCCGGCAAGCCCTGGGCCCGAATGGCAACGATATAGCAAACGACCTGCTGGATGCCGGGTCCGGTCTAGACCTC AGAAGCACCGATGCGGAGTTGAAGATCGTTCAGGGTGACAGTCCGTTTGACATGATTACCCCGTATCAATGGTCCGATGA TCCGTTCACCTACGCGATCCTGTTTTCGTCCACGCCCAATACGATTTACGGGACCGTCCTCGACCTTGAGAAGGAGCTGT ATCCTCTGGCGAAAACCCGGTTCGGTGCCGTCATCTTCGTGCGTCCGATCATCGACCAGGTCCTTGAGAAAATGGGTTCC ACCGATTGGCAGGCCCATCGCGATGCCATCGTCGATCTTTTGCGCCGCACCTACGTGCATGAGATCGGCCATCTTCTGAA CCTCCCGCATACATGGCAGCGCGGGCGTTTCGCGCTTCCCCCGGTGCCTGCGAACCCGGCCGCCCAAAGCTGGATGGCGT ATGGAAGCCGGTTCCCGCTTGGCGATTTCATGACAACCAGCCGCAAGAAAATCGCCAATGGAAGCAAGCCCCAAGAAGAC GCGTTGCTCAAAGCGGATGCGCTTTTGTCGAATGAGGACGCGCTCTCCGATCCGGGCTTCACCGACGCCGAGAAGGGCTG GCTCTGGCACGCGCCGTTCGACCACATCTCTCCCGGTGGTCCGTATTTCACGGCCCGCGAGCCAGAGCCGGTCCGATTGC ATGAACCCGCCGCAAGCTCGGATCTGCGATTGTCGATTGATCTGTGGGACACCCACGGCACTGATCCCGACACGGGGGCC GCCATTCTGTCGCGTGGCGCGCATCACCTGTTTTCGTGGCAACCGATCTTTGGAGAGGTTGTCTTCAATGCGCCGCACAA TGTGGCCGCGGACAGTCCATTCCACTTTGCGTTCCAGTCGCCGATGCTCTCGCTTCTGATGCGCGAAGAATACCCGGCGC AACCCGGCAGGAACATTCCGCTGAAGGTCCGCGAAATTCCGGTCTCGCATTTGCCAGCAGGGTGGCGCGTGCGCACCGAT ACCGGCTTGGCATCCGCAGATCTGCCGCAGCAATTCCACACAAGCGCCCTTAGCCCGGCTGCGACAGGGCTGTCCCATCC CGATGGCGTTGGCATATGGGATGAATACCGGCGCACCACGCCCTTCTTTGATCCGTTCCAGTTCAGCACGGGGTTCACCG AAAGCGCCTGCACCGATTTTACGCTTCAAGCGGTGCTGCGGCCCGTGGGCCGGGCACCGATCTACTCCGATCCGGTGCGC GTCCAGTTCCGGTATCTGTATAAGTCGTTCACCGCGGCAGAGGCCGCGATCCTGTCCGATCCCAAGCTGCCCACGTTGCT GGACACCTTGGCCTACCTCATCAGCCACGACGTGGTGAACCTTGAACGGCCCTCGCGTCATTCAACCGATGTCAGTGAGT TCCGAAACGCCTTTCAGGATCTGGTGGCCAAGATCTCGGCCCTGACCGACAACGGCGCGGTATCGCCATCCCTCATGTCG TATCTCAGGATGGTGAACTGGGCCTCCGCGACATTGTCCGGACGGCAAAACGGTATCACGCCACCCCGGCCCGACGAGCG GCTTCTTCGCCTGCTGCGTCAGTTTACCCTCAATGATGAACGAGCGCTCACCATACTTGGGCGCAGCTATGAGATGGAGT TTTAG
Upstream 100 bases:
>100_bases TGGGGCCGGACCGTTAAATCCGGCTGATCCAGTCGCCCCAGAGCTTGCCCGGGCGCGCCGCGCCGCCTCATCGTGCAGGC GTCAAGGACTGGAGCGCCCG
Downstream 100 bases:
>100_bases AGATGGCAGATATCCCCGAAGGCCTGCTGATCATGCAAGCGGAACGCGCCTACATTGCGGTGCGCGCCTGGCTTGATCCA GACGGAAACGAGCTTGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 774; Mature: 773
Protein sequence:
>774_residues MPNDPLNAQTISDDAMFAARAYIVENQRYPDPALPHPAPGLAAVLSRIKGRYLFPVRSTLAAAQSRAILPDTRAYVTLRV DPVLGKISGDLHADIQRKTWRLSWQSVSLFHIDAPVGVDAATWAASGWTLFGICDLAASGLTEPSGNTLALALRIASDDT IEACRIIETRPNGSISRDLTMTRTPNKTHDLAYRDLTPIHLADADLEADPAMNAITRQALGPNGNDIANDLLDAGSGLDL RSTDAELKIVQGDSPFDMITPYQWSDDPFTYAILFSSTPNTIYGTVLDLEKELYPLAKTRFGAVIFVRPIIDQVLEKMGS TDWQAHRDAIVDLLRRTYVHEIGHLLNLPHTWQRGRFALPPVPANPAAQSWMAYGSRFPLGDFMTTSRKKIANGSKPQED ALLKADALLSNEDALSDPGFTDAEKGWLWHAPFDHISPGGPYFTAREPEPVRLHEPAASSDLRLSIDLWDTHGTDPDTGA AILSRGAHHLFSWQPIFGEVVFNAPHNVAADSPFHFAFQSPMLSLLMREEYPAQPGRNIPLKVREIPVSHLPAGWRVRTD TGLASADLPQQFHTSALSPAATGLSHPDGVGIWDEYRRTTPFFDPFQFSTGFTESACTDFTLQAVLRPVGRAPIYSDPVR VQFRYLYKSFTAAEAAILSDPKLPTLLDTLAYLISHDVVNLERPSRHSTDVSEFRNAFQDLVAKISALTDNGAVSPSLMS YLRMVNWASATLSGRQNGITPPRPDERLLRLLRQFTLNDERALTILGRSYEMEF
Sequences:
>Translated_774_residues MPNDPLNAQTISDDAMFAARAYIVENQRYPDPALPHPAPGLAAVLSRIKGRYLFPVRSTLAAAQSRAILPDTRAYVTLRV DPVLGKISGDLHADIQRKTWRLSWQSVSLFHIDAPVGVDAATWAASGWTLFGICDLAASGLTEPSGNTLALALRIASDDT IEACRIIETRPNGSISRDLTMTRTPNKTHDLAYRDLTPIHLADADLEADPAMNAITRQALGPNGNDIANDLLDAGSGLDL RSTDAELKIVQGDSPFDMITPYQWSDDPFTYAILFSSTPNTIYGTVLDLEKELYPLAKTRFGAVIFVRPIIDQVLEKMGS TDWQAHRDAIVDLLRRTYVHEIGHLLNLPHTWQRGRFALPPVPANPAAQSWMAYGSRFPLGDFMTTSRKKIANGSKPQED ALLKADALLSNEDALSDPGFTDAEKGWLWHAPFDHISPGGPYFTAREPEPVRLHEPAASSDLRLSIDLWDTHGTDPDTGA AILSRGAHHLFSWQPIFGEVVFNAPHNVAADSPFHFAFQSPMLSLLMREEYPAQPGRNIPLKVREIPVSHLPAGWRVRTD TGLASADLPQQFHTSALSPAATGLSHPDGVGIWDEYRRTTPFFDPFQFSTGFTESACTDFTLQAVLRPVGRAPIYSDPVR VQFRYLYKSFTAAEAAILSDPKLPTLLDTLAYLISHDVVNLERPSRHSTDVSEFRNAFQDLVAKISALTDNGAVSPSLMS YLRMVNWASATLSGRQNGITPPRPDERLLRLLRQFTLNDERALTILGRSYEMEF >Mature_773_residues PNDPLNAQTISDDAMFAARAYIVENQRYPDPALPHPAPGLAAVLSRIKGRYLFPVRSTLAAAQSRAILPDTRAYVTLRVD PVLGKISGDLHADIQRKTWRLSWQSVSLFHIDAPVGVDAATWAASGWTLFGICDLAASGLTEPSGNTLALALRIASDDTI EACRIIETRPNGSISRDLTMTRTPNKTHDLAYRDLTPIHLADADLEADPAMNAITRQALGPNGNDIANDLLDAGSGLDLR STDAELKIVQGDSPFDMITPYQWSDDPFTYAILFSSTPNTIYGTVLDLEKELYPLAKTRFGAVIFVRPIIDQVLEKMGST DWQAHRDAIVDLLRRTYVHEIGHLLNLPHTWQRGRFALPPVPANPAAQSWMAYGSRFPLGDFMTTSRKKIANGSKPQEDA LLKADALLSNEDALSDPGFTDAEKGWLWHAPFDHISPGGPYFTAREPEPVRLHEPAASSDLRLSIDLWDTHGTDPDTGAA ILSRGAHHLFSWQPIFGEVVFNAPHNVAADSPFHFAFQSPMLSLLMREEYPAQPGRNIPLKVREIPVSHLPAGWRVRTDT GLASADLPQQFHTSALSPAATGLSHPDGVGIWDEYRRTTPFFDPFQFSTGFTESACTDFTLQAVLRPVGRAPIYSDPVRV QFRYLYKSFTAAEAAILSDPKLPTLLDTLAYLISHDVVNLERPSRHSTDVSEFRNAFQDLVAKISALTDNGAVSPSLMSY LRMVNWASATLSGRQNGITPPRPDERLLRLLRQFTLNDERALTILGRSYEMEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85486; Mature: 85355
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNDPLNAQTISDDAMFAARAYIVENQRYPDPALPHPAPGLAAVLSRIKGRYLFPVRSTL CCCCCCCCEECCCHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHH AAAQSRAILPDTRAYVTLRVDPVLGKISGDLHADIQRKTWRLSWQSVSLFHIDAPVGVDA HHHHCCCCCCCCCEEEEEEECCCHHHHCCCHHHCCCHHEEEEEEEEEEEEEECCCCCCCH ATWAASGWTLFGICDLAASGLTEPSGNTLALALRIASDDTIEACRIIETRPNGSISRDLT HHHCCCCCEEEEHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEE MTRTPNKTHDLAYRDLTPIHLADADLEADPAMNAITRQALGPNGNDIANDLLDAGSGLDL EECCCCCCCCCHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCE RSTDAELKIVQGDSPFDMITPYQWSDDPFTYAILFSSTPNTIYGTVLDLEKELYPLAKTR ECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHH FGAVIFVRPIIDQVLEKMGSTDWQAHRDAIVDLLRRTYVHEIGHLLNLPHTWQRGRFALP CCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC PVPANPAAQSWMAYGSRFPLGDFMTTSRKKIANGSKPQEDALLKADALLSNEDALSDPGF CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCC TDAEKGWLWHAPFDHISPGGPYFTAREPEPVRLHEPAASSDLRLSIDLWDTHGTDPDTGA CCCCCCEEEECCHHCCCCCCCEECCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCHHH AILSRGAHHLFSWQPIFGEVVFNAPHNVAADSPFHFAFQSPMLSLLMREEYPAQPGRNIP HHHHCCCHHHCCCCCCCEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCC LKVREIPVSHLPAGWRVRTDTGLASADLPQQFHTSALSPAATGLSHPDGVGIWDEYRRTT EEEEECCHHHCCCCCEEECCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCHHHHHCCC PFFDPFQFSTGFTESACTDFTLQAVLRPVGRAPIYSDPVRVQFRYLYKSFTAAEAAILSD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC PKLPTLLDTLAYLISHDVVNLERPSRHSTDVSEFRNAFQDLVAKISALTDNGAVSPSLMS CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH YLRMVNWASATLSGRQNGITPPRPDERLLRLLRQFTLNDERALTILGRSYEMEF HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCEECCC >Mature Secondary Structure PNDPLNAQTISDDAMFAARAYIVENQRYPDPALPHPAPGLAAVLSRIKGRYLFPVRSTL CCCCCCCEECCCHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHH AAAQSRAILPDTRAYVTLRVDPVLGKISGDLHADIQRKTWRLSWQSVSLFHIDAPVGVDA HHHHCCCCCCCCCEEEEEEECCCHHHHCCCHHHCCCHHEEEEEEEEEEEEEECCCCCCCH ATWAASGWTLFGICDLAASGLTEPSGNTLALALRIASDDTIEACRIIETRPNGSISRDLT HHHCCCCCEEEEHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEE MTRTPNKTHDLAYRDLTPIHLADADLEADPAMNAITRQALGPNGNDIANDLLDAGSGLDL EECCCCCCCCCHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCE RSTDAELKIVQGDSPFDMITPYQWSDDPFTYAILFSSTPNTIYGTVLDLEKELYPLAKTR ECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHH FGAVIFVRPIIDQVLEKMGSTDWQAHRDAIVDLLRRTYVHEIGHLLNLPHTWQRGRFALP CCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC PVPANPAAQSWMAYGSRFPLGDFMTTSRKKIANGSKPQEDALLKADALLSNEDALSDPGF CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCC TDAEKGWLWHAPFDHISPGGPYFTAREPEPVRLHEPAASSDLRLSIDLWDTHGTDPDTGA CCCCCCEEEECCHHCCCCCCCEECCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCHHH AILSRGAHHLFSWQPIFGEVVFNAPHNVAADSPFHFAFQSPMLSLLMREEYPAQPGRNIP HHHHCCCHHHCCCCCCCEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCC LKVREIPVSHLPAGWRVRTDTGLASADLPQQFHTSALSPAATGLSHPDGVGIWDEYRRTT EEEEECCHHHCCCCCEEECCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCHHHHHCCC PFFDPFQFSTGFTESACTDFTLQAVLRPVGRAPIYSDPVRVQFRYLYKSFTAAEAAILSD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC PKLPTLLDTLAYLISHDVVNLERPSRHSTDVSEFRNAFQDLVAKISALTDNGAVSPSLMS CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH YLRMVNWASATLSGRQNGITPPRPDERLLRLLRQFTLNDERALTILGRSYEMEF HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA