Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is 89054750

Identifier: 89054750

GI number: 89054750

Start: 2266290

End: 2268614

Strand: Direct

Name: 89054750

Synonym: Jann_2259

Alternate gene names: NA

Gene position: 2266290-2268614 (Clockwise)

Preceding gene: 89054749

Following gene: 89054751

Centisome position: 52.48

GC content: 60.43

Gene sequence:

>2325_bases
ATGCCGAATGATCCGTTGAATGCACAGACCATCAGCGATGACGCGATGTTCGCCGCGCGCGCATATATCGTCGAAAATCA
ACGCTATCCCGATCCAGCACTGCCCCATCCTGCGCCCGGGCTTGCGGCCGTTCTGAGCCGTATAAAGGGACGCTATCTGT
TTCCGGTTCGATCCACGCTGGCCGCCGCCCAGTCCAGGGCCATCTTGCCCGACACAAGGGCCTATGTGACGCTTCGGGTC
GATCCTGTCTTGGGCAAGATCTCGGGCGACCTTCATGCGGATATCCAACGCAAGACATGGCGTTTGTCGTGGCAAAGCGT
GAGCTTGTTTCATATTGACGCGCCAGTGGGGGTGGATGCCGCGACCTGGGCTGCCAGCGGCTGGACCCTGTTTGGCATCT
GCGATCTTGCCGCAAGTGGCCTGACCGAGCCGTCCGGCAACACGCTGGCACTGGCCCTTCGGATCGCCAGTGACGACACC
ATCGAGGCCTGTCGCATCATCGAGACCCGGCCCAACGGGTCAATATCGCGCGACCTGACCATGACGCGGACCCCGAACAA
GACGCACGACCTGGCCTACCGCGATCTGACCCCGATTCATCTGGCAGATGCCGATCTTGAAGCCGATCCGGCGATGAACG
CGATCACCCGGCAAGCCCTGGGCCCGAATGGCAACGATATAGCAAACGACCTGCTGGATGCCGGGTCCGGTCTAGACCTC
AGAAGCACCGATGCGGAGTTGAAGATCGTTCAGGGTGACAGTCCGTTTGACATGATTACCCCGTATCAATGGTCCGATGA
TCCGTTCACCTACGCGATCCTGTTTTCGTCCACGCCCAATACGATTTACGGGACCGTCCTCGACCTTGAGAAGGAGCTGT
ATCCTCTGGCGAAAACCCGGTTCGGTGCCGTCATCTTCGTGCGTCCGATCATCGACCAGGTCCTTGAGAAAATGGGTTCC
ACCGATTGGCAGGCCCATCGCGATGCCATCGTCGATCTTTTGCGCCGCACCTACGTGCATGAGATCGGCCATCTTCTGAA
CCTCCCGCATACATGGCAGCGCGGGCGTTTCGCGCTTCCCCCGGTGCCTGCGAACCCGGCCGCCCAAAGCTGGATGGCGT
ATGGAAGCCGGTTCCCGCTTGGCGATTTCATGACAACCAGCCGCAAGAAAATCGCCAATGGAAGCAAGCCCCAAGAAGAC
GCGTTGCTCAAAGCGGATGCGCTTTTGTCGAATGAGGACGCGCTCTCCGATCCGGGCTTCACCGACGCCGAGAAGGGCTG
GCTCTGGCACGCGCCGTTCGACCACATCTCTCCCGGTGGTCCGTATTTCACGGCCCGCGAGCCAGAGCCGGTCCGATTGC
ATGAACCCGCCGCAAGCTCGGATCTGCGATTGTCGATTGATCTGTGGGACACCCACGGCACTGATCCCGACACGGGGGCC
GCCATTCTGTCGCGTGGCGCGCATCACCTGTTTTCGTGGCAACCGATCTTTGGAGAGGTTGTCTTCAATGCGCCGCACAA
TGTGGCCGCGGACAGTCCATTCCACTTTGCGTTCCAGTCGCCGATGCTCTCGCTTCTGATGCGCGAAGAATACCCGGCGC
AACCCGGCAGGAACATTCCGCTGAAGGTCCGCGAAATTCCGGTCTCGCATTTGCCAGCAGGGTGGCGCGTGCGCACCGAT
ACCGGCTTGGCATCCGCAGATCTGCCGCAGCAATTCCACACAAGCGCCCTTAGCCCGGCTGCGACAGGGCTGTCCCATCC
CGATGGCGTTGGCATATGGGATGAATACCGGCGCACCACGCCCTTCTTTGATCCGTTCCAGTTCAGCACGGGGTTCACCG
AAAGCGCCTGCACCGATTTTACGCTTCAAGCGGTGCTGCGGCCCGTGGGCCGGGCACCGATCTACTCCGATCCGGTGCGC
GTCCAGTTCCGGTATCTGTATAAGTCGTTCACCGCGGCAGAGGCCGCGATCCTGTCCGATCCCAAGCTGCCCACGTTGCT
GGACACCTTGGCCTACCTCATCAGCCACGACGTGGTGAACCTTGAACGGCCCTCGCGTCATTCAACCGATGTCAGTGAGT
TCCGAAACGCCTTTCAGGATCTGGTGGCCAAGATCTCGGCCCTGACCGACAACGGCGCGGTATCGCCATCCCTCATGTCG
TATCTCAGGATGGTGAACTGGGCCTCCGCGACATTGTCCGGACGGCAAAACGGTATCACGCCACCCCGGCCCGACGAGCG
GCTTCTTCGCCTGCTGCGTCAGTTTACCCTCAATGATGAACGAGCGCTCACCATACTTGGGCGCAGCTATGAGATGGAGT
TTTAG

Upstream 100 bases:

>100_bases
TGGGGCCGGACCGTTAAATCCGGCTGATCCAGTCGCCCCAGAGCTTGCCCGGGCGCGCCGCGCCGCCTCATCGTGCAGGC
GTCAAGGACTGGAGCGCCCG

Downstream 100 bases:

>100_bases
AGATGGCAGATATCCCCGAAGGCCTGCTGATCATGCAAGCGGAACGCGCCTACATTGCGGTGCGCGCCTGGCTTGATCCA
GACGGAAACGAGCTTGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 774; Mature: 773

Protein sequence:

>774_residues
MPNDPLNAQTISDDAMFAARAYIVENQRYPDPALPHPAPGLAAVLSRIKGRYLFPVRSTLAAAQSRAILPDTRAYVTLRV
DPVLGKISGDLHADIQRKTWRLSWQSVSLFHIDAPVGVDAATWAASGWTLFGICDLAASGLTEPSGNTLALALRIASDDT
IEACRIIETRPNGSISRDLTMTRTPNKTHDLAYRDLTPIHLADADLEADPAMNAITRQALGPNGNDIANDLLDAGSGLDL
RSTDAELKIVQGDSPFDMITPYQWSDDPFTYAILFSSTPNTIYGTVLDLEKELYPLAKTRFGAVIFVRPIIDQVLEKMGS
TDWQAHRDAIVDLLRRTYVHEIGHLLNLPHTWQRGRFALPPVPANPAAQSWMAYGSRFPLGDFMTTSRKKIANGSKPQED
ALLKADALLSNEDALSDPGFTDAEKGWLWHAPFDHISPGGPYFTAREPEPVRLHEPAASSDLRLSIDLWDTHGTDPDTGA
AILSRGAHHLFSWQPIFGEVVFNAPHNVAADSPFHFAFQSPMLSLLMREEYPAQPGRNIPLKVREIPVSHLPAGWRVRTD
TGLASADLPQQFHTSALSPAATGLSHPDGVGIWDEYRRTTPFFDPFQFSTGFTESACTDFTLQAVLRPVGRAPIYSDPVR
VQFRYLYKSFTAAEAAILSDPKLPTLLDTLAYLISHDVVNLERPSRHSTDVSEFRNAFQDLVAKISALTDNGAVSPSLMS
YLRMVNWASATLSGRQNGITPPRPDERLLRLLRQFTLNDERALTILGRSYEMEF

Sequences:

>Translated_774_residues
MPNDPLNAQTISDDAMFAARAYIVENQRYPDPALPHPAPGLAAVLSRIKGRYLFPVRSTLAAAQSRAILPDTRAYVTLRV
DPVLGKISGDLHADIQRKTWRLSWQSVSLFHIDAPVGVDAATWAASGWTLFGICDLAASGLTEPSGNTLALALRIASDDT
IEACRIIETRPNGSISRDLTMTRTPNKTHDLAYRDLTPIHLADADLEADPAMNAITRQALGPNGNDIANDLLDAGSGLDL
RSTDAELKIVQGDSPFDMITPYQWSDDPFTYAILFSSTPNTIYGTVLDLEKELYPLAKTRFGAVIFVRPIIDQVLEKMGS
TDWQAHRDAIVDLLRRTYVHEIGHLLNLPHTWQRGRFALPPVPANPAAQSWMAYGSRFPLGDFMTTSRKKIANGSKPQED
ALLKADALLSNEDALSDPGFTDAEKGWLWHAPFDHISPGGPYFTAREPEPVRLHEPAASSDLRLSIDLWDTHGTDPDTGA
AILSRGAHHLFSWQPIFGEVVFNAPHNVAADSPFHFAFQSPMLSLLMREEYPAQPGRNIPLKVREIPVSHLPAGWRVRTD
TGLASADLPQQFHTSALSPAATGLSHPDGVGIWDEYRRTTPFFDPFQFSTGFTESACTDFTLQAVLRPVGRAPIYSDPVR
VQFRYLYKSFTAAEAAILSDPKLPTLLDTLAYLISHDVVNLERPSRHSTDVSEFRNAFQDLVAKISALTDNGAVSPSLMS
YLRMVNWASATLSGRQNGITPPRPDERLLRLLRQFTLNDERALTILGRSYEMEF
>Mature_773_residues
PNDPLNAQTISDDAMFAARAYIVENQRYPDPALPHPAPGLAAVLSRIKGRYLFPVRSTLAAAQSRAILPDTRAYVTLRVD
PVLGKISGDLHADIQRKTWRLSWQSVSLFHIDAPVGVDAATWAASGWTLFGICDLAASGLTEPSGNTLALALRIASDDTI
EACRIIETRPNGSISRDLTMTRTPNKTHDLAYRDLTPIHLADADLEADPAMNAITRQALGPNGNDIANDLLDAGSGLDLR
STDAELKIVQGDSPFDMITPYQWSDDPFTYAILFSSTPNTIYGTVLDLEKELYPLAKTRFGAVIFVRPIIDQVLEKMGST
DWQAHRDAIVDLLRRTYVHEIGHLLNLPHTWQRGRFALPPVPANPAAQSWMAYGSRFPLGDFMTTSRKKIANGSKPQEDA
LLKADALLSNEDALSDPGFTDAEKGWLWHAPFDHISPGGPYFTAREPEPVRLHEPAASSDLRLSIDLWDTHGTDPDTGAA
ILSRGAHHLFSWQPIFGEVVFNAPHNVAADSPFHFAFQSPMLSLLMREEYPAQPGRNIPLKVREIPVSHLPAGWRVRTDT
GLASADLPQQFHTSALSPAATGLSHPDGVGIWDEYRRTTPFFDPFQFSTGFTESACTDFTLQAVLRPVGRAPIYSDPVRV
QFRYLYKSFTAAEAAILSDPKLPTLLDTLAYLISHDVVNLERPSRHSTDVSEFRNAFQDLVAKISALTDNGAVSPSLMSY
LRMVNWASATLSGRQNGITPPRPDERLLRLLRQFTLNDERALTILGRSYEMEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85486; Mature: 85355

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNDPLNAQTISDDAMFAARAYIVENQRYPDPALPHPAPGLAAVLSRIKGRYLFPVRSTL
CCCCCCCCEECCCHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHH
AAAQSRAILPDTRAYVTLRVDPVLGKISGDLHADIQRKTWRLSWQSVSLFHIDAPVGVDA
HHHHCCCCCCCCCEEEEEEECCCHHHHCCCHHHCCCHHEEEEEEEEEEEEEECCCCCCCH
ATWAASGWTLFGICDLAASGLTEPSGNTLALALRIASDDTIEACRIIETRPNGSISRDLT
HHHCCCCCEEEEHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEE
MTRTPNKTHDLAYRDLTPIHLADADLEADPAMNAITRQALGPNGNDIANDLLDAGSGLDL
EECCCCCCCCCHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCE
RSTDAELKIVQGDSPFDMITPYQWSDDPFTYAILFSSTPNTIYGTVLDLEKELYPLAKTR
ECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHH
FGAVIFVRPIIDQVLEKMGSTDWQAHRDAIVDLLRRTYVHEIGHLLNLPHTWQRGRFALP
CCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC
PVPANPAAQSWMAYGSRFPLGDFMTTSRKKIANGSKPQEDALLKADALLSNEDALSDPGF
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
TDAEKGWLWHAPFDHISPGGPYFTAREPEPVRLHEPAASSDLRLSIDLWDTHGTDPDTGA
CCCCCCEEEECCHHCCCCCCCEECCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCHHH
AILSRGAHHLFSWQPIFGEVVFNAPHNVAADSPFHFAFQSPMLSLLMREEYPAQPGRNIP
HHHHCCCHHHCCCCCCCEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCC
LKVREIPVSHLPAGWRVRTDTGLASADLPQQFHTSALSPAATGLSHPDGVGIWDEYRRTT
EEEEECCHHHCCCCCEEECCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCHHHHHCCC
PFFDPFQFSTGFTESACTDFTLQAVLRPVGRAPIYSDPVRVQFRYLYKSFTAAEAAILSD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PKLPTLLDTLAYLISHDVVNLERPSRHSTDVSEFRNAFQDLVAKISALTDNGAVSPSLMS
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
YLRMVNWASATLSGRQNGITPPRPDERLLRLLRQFTLNDERALTILGRSYEMEF
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCEECCC
>Mature Secondary Structure 
PNDPLNAQTISDDAMFAARAYIVENQRYPDPALPHPAPGLAAVLSRIKGRYLFPVRSTL
CCCCCCCEECCCHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHH
AAAQSRAILPDTRAYVTLRVDPVLGKISGDLHADIQRKTWRLSWQSVSLFHIDAPVGVDA
HHHHCCCCCCCCCEEEEEEECCCHHHHCCCHHHCCCHHEEEEEEEEEEEEEECCCCCCCH
ATWAASGWTLFGICDLAASGLTEPSGNTLALALRIASDDTIEACRIIETRPNGSISRDLT
HHHCCCCCEEEEHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEE
MTRTPNKTHDLAYRDLTPIHLADADLEADPAMNAITRQALGPNGNDIANDLLDAGSGLDL
EECCCCCCCCCHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCE
RSTDAELKIVQGDSPFDMITPYQWSDDPFTYAILFSSTPNTIYGTVLDLEKELYPLAKTR
ECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHH
FGAVIFVRPIIDQVLEKMGSTDWQAHRDAIVDLLRRTYVHEIGHLLNLPHTWQRGRFALP
CCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC
PVPANPAAQSWMAYGSRFPLGDFMTTSRKKIANGSKPQEDALLKADALLSNEDALSDPGF
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
TDAEKGWLWHAPFDHISPGGPYFTAREPEPVRLHEPAASSDLRLSIDLWDTHGTDPDTGA
CCCCCCEEEECCHHCCCCCCCEECCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCHHH
AILSRGAHHLFSWQPIFGEVVFNAPHNVAADSPFHFAFQSPMLSLLMREEYPAQPGRNIP
HHHHCCCHHHCCCCCCCEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCC
LKVREIPVSHLPAGWRVRTDTGLASADLPQQFHTSALSPAATGLSHPDGVGIWDEYRRTT
EEEEECCHHHCCCCCEEECCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCHHHHHCCC
PFFDPFQFSTGFTESACTDFTLQAVLRPVGRAPIYSDPVRVQFRYLYKSFTAAEAAILSD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PKLPTLLDTLAYLISHDVVNLERPSRHSTDVSEFRNAFQDLVAKISALTDNGAVSPSLMS
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
YLRMVNWASATLSGRQNGITPPRPDERLLRLLRQFTLNDERALTILGRSYEMEF
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA