| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054702
Identifier: 89054702
GI number: 89054702
Start: 2218052
End: 2219188
Strand: Direct
Name: 89054702
Synonym: Jann_2211
Alternate gene names: NA
Gene position: 2218052-2219188 (Clockwise)
Preceding gene: 89054701
Following gene: 89054703
Centisome position: 51.37
GC content: 62.09
Gene sequence:
>1137_bases ATGACAAATGAACACCGCAGCCCCGAAGAGATCGAGCGCGAGATTGAAGAGAAGCGCTCGGACCTGACATCAAACCTTGA GGATTTGCAGGACAAATTCTCAATCGACACGCTGGTGCGCCAGGTGGGCGACCAGTTCCGCGAACATGGCGGCGATATGG GTCGCTCGATTTCCAATCAGGTGAAAGCGAACCCAATCCCGCTTGCGCTGACTGGAATTGGTCTGGCGTGGATGATGTTT GGAAGCGGCCAGAAACCCACACCCGCCGCGGCACGAGATGACGACGGTTATAGCTCTGCTGAACGTGATTTCCGTCGGAC AAGGCAGGAGCAGGGTCTTCCCTACACGCCACCGACCCGCTACACGCCCGCCGACACTCCCAGCACACCGTCCTGGGCTC GGGAGGAGGAGGGGGGAGCCTCCATCAGTGAGACGTTTTCCGATGGTGCGGATGCCGTCAAGGATCGTGCGTCGTCTACC GCGTCTGCCATCTCCGATGGTGCCACCCGCGCAGGGGATGCAGTGTCAGACGCCACAGCGTCAGCGAAGTCGTCAATCGC GAGCGGCGCGAAGTCCGGCCGCGATGGCATCAGTGCAGCGCGTAACCGTCTTGCAGAAGGGACGGAGACCCTCACCGCAG AGGCGCGTGAACGCGTCATAGCAGCGCGCCGGACGGCCATTGAAATGCGCAACTCCGCATCGCATTCCCTGAACCAGATG GGCCGATCCGCGTCGCGGTCTGCGAGCGACGGCGCTGATGCAGCGGCGGACTTTTACGACCGGCAACCGTTGGTCGTGGG TGCGCTTGCGCTTGCCGTCGGTGCCGCGATCGGGGGGGCGCTGTCCCGCACGAAGATCGAAGATGATCTGATGGGCGCCC AAAGCGACAACCTGTTCGACGAAGCCGAGCGGATTTTCGAGGAAGAGAAGTCGAAGGCACTGACTGTTGCGCGCTCGGTT AAAGATGAGGTCGAGGATATCGCGTCGGGGACCAAGGCCGACCTCGACAGCGGCGCGCCGGAGGGGCAATCGGCTGTGGA TGCGGTCGCGGATCAGGCCAAGTCTGCCGCCAAACGCGTGGCCGACAAAGCCAAGTCGACGGCGGAAGACGAAAATCTTG GTCGCCCGAAGTCTTAA
Upstream 100 bases:
>100_bases ATGGGCAAAGGGATCAACGACCTCAAACTCTCAAGCCTCGCCCCCACACGCACCGTGAAGAACGTGCAGCGCGATGCAGC AGCCGTGAAGGACGCATACG
Downstream 100 bases:
>100_bases TGACAAACGAAGGGGGCCACCGCGCTGGCCCTCCTCGCCTATTTTGAAGAGAGCAAAAGATGGCACCTGGCCATATCGCT GAGACACCCACTGACAGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTNEHRSPEEIEREIEEKRSDLTSNLEDLQDKFSIDTLVRQVGDQFREHGGDMGRSISNQVKANPIPLALTGIGLAWMMF GSGQKPTPAAARDDDGYSSAERDFRRTRQEQGLPYTPPTRYTPADTPSTPSWAREEEGGASISETFSDGADAVKDRASST ASAISDGATRAGDAVSDATASAKSSIASGAKSGRDGISAARNRLAEGTETLTAEARERVIAARRTAIEMRNSASHSLNQM GRSASRSASDGADAAADFYDRQPLVVGALALAVGAAIGGALSRTKIEDDLMGAQSDNLFDEAERIFEEEKSKALTVARSV KDEVEDIASGTKADLDSGAPEGQSAVDAVADQAKSAAKRVADKAKSTAEDENLGRPKS
Sequences:
>Translated_378_residues MTNEHRSPEEIEREIEEKRSDLTSNLEDLQDKFSIDTLVRQVGDQFREHGGDMGRSISNQVKANPIPLALTGIGLAWMMF GSGQKPTPAAARDDDGYSSAERDFRRTRQEQGLPYTPPTRYTPADTPSTPSWAREEEGGASISETFSDGADAVKDRASST ASAISDGATRAGDAVSDATASAKSSIASGAKSGRDGISAARNRLAEGTETLTAEARERVIAARRTAIEMRNSASHSLNQM GRSASRSASDGADAAADFYDRQPLVVGALALAVGAAIGGALSRTKIEDDLMGAQSDNLFDEAERIFEEEKSKALTVARSV KDEVEDIASGTKADLDSGAPEGQSAVDAVADQAKSAAKRVADKAKSTAEDENLGRPKS >Mature_377_residues TNEHRSPEEIEREIEEKRSDLTSNLEDLQDKFSIDTLVRQVGDQFREHGGDMGRSISNQVKANPIPLALTGIGLAWMMFG SGQKPTPAAARDDDGYSSAERDFRRTRQEQGLPYTPPTRYTPADTPSTPSWAREEEGGASISETFSDGADAVKDRASSTA SAISDGATRAGDAVSDATASAKSSIASGAKSGRDGISAARNRLAEGTETLTAEARERVIAARRTAIEMRNSASHSLNQMG RSASRSASDGADAAADFYDRQPLVVGALALAVGAAIGGALSRTKIEDDLMGAQSDNLFDEAERIFEEEKSKALTVARSVK DEVEDIASGTKADLDSGAPEGQSAVDAVADQAKSAAKRVADKAKSTAEDENLGRPKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39931; Mature: 39800
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNEHRSPEEIEREIEEKRSDLTSNLEDLQDKFSIDTLVRQVGDQFREHGGDMGRSISNQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKANPIPLALTGIGLAWMMFGSGQKPTPAAARDDDGYSSAERDFRRTRQEQGLPYTPPTR HCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC YTPADTPSTPSWAREEEGGASISETFSDGADAVKDRASSTASAISDGATRAGDAVSDATA CCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHH SAKSSIASGAKSGRDGISAARNRLAEGTETLTAEARERVIAARRTAIEMRNSASHSLNQM HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRSASRSASDGADAAADFYDRQPLVVGALALAVGAAIGGALSRTKIEDDLMGAQSDNLFD HHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH EAERIFEEEKSKALTVARSVKDEVEDIASGTKADLDSGAPEGQSAVDAVADQAKSAAKRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHH ADKAKSTAEDENLGRPKS HHHHHHHCCHHCCCCCCC >Mature Secondary Structure TNEHRSPEEIEREIEEKRSDLTSNLEDLQDKFSIDTLVRQVGDQFREHGGDMGRSISNQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKANPIPLALTGIGLAWMMFGSGQKPTPAAARDDDGYSSAERDFRRTRQEQGLPYTPPTR HCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC YTPADTPSTPSWAREEEGGASISETFSDGADAVKDRASSTASAISDGATRAGDAVSDATA CCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHH SAKSSIASGAKSGRDGISAARNRLAEGTETLTAEARERVIAARRTAIEMRNSASHSLNQM HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRSASRSASDGADAAADFYDRQPLVVGALALAVGAAIGGALSRTKIEDDLMGAQSDNLFD HHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH EAERIFEEEKSKALTVARSVKDEVEDIASGTKADLDSGAPEGQSAVDAVADQAKSAAKRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHH ADKAKSTAEDENLGRPKS HHHHHHHCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA