| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89054700
Identifier: 89054700
GI number: 89054700
Start: 2217179
End: 2217667
Strand: Direct
Name: 89054700
Synonym: Jann_2209
Alternate gene names: NA
Gene position: 2217179-2217667 (Clockwise)
Preceding gene: 89054698
Following gene: 89054701
Centisome position: 51.35
GC content: 64.01
Gene sequence:
>489_bases ATGACTACGCAAAACACACCCGGGACCGGCGGCACAGCGCCCGCTGCGACCCAAGCGAAAGAAACGGCGGCCGATCTGGC GCAGCACGGCAAGACAGCCGCTCGCGACATGGCCCAAGATGCCGCCGCAGCTGCATCGGATCGCGCGGGCGAGGCGAAAT CAGCCATGGCCGACGAAGTGTCCGGCGTGGCCTCTGCGCTGCGGACCGCTGCAAATGAGATGCGCAGCGGCTCCCCGCAG GAACGCACCTTCGGGCAGATCGCCGAAGGTTTGGCCGACGTATCTGATGCGATGCGCGAAAAGGATCTCAGCACGATGGT TGCTGATGTCAGCGCCTTCGCCCGCAAGAACCCGCTGGTGTTTCTTGGTGGTGCAGCTCTGATCGGCTTTGCAGCCACGC GCTTTGCCAAGGCCTCCAATGAGGCAGCGTCCCAGGTTGCGCACACACCGGTGTCACCCACCACACCCACAACGGGGGAT TTCTCATGA
Upstream 100 bases:
>100_bases AGGAGCCATCCATGCAAAGCGTCTTCTACCTCATCGGACTGATTGTCGTCGTTCTGGCGATCCTTGGCTTTCTATTCTGA ACCAGACCTGGAGAAATGAC
Downstream 100 bases:
>100_bases GCGAAGATACCAACAAAAGCGCCGGTGGCCTTCTATCTGACGCCCTCGGCAATGTCAGTGGTCTGGTGCGCAGCGAAGTT GATCTGGCGCGCGCCGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTTQNTPGTGGTAPAATQAKETAADLAQHGKTAARDMAQDAAAAASDRAGEAKSAMADEVSGVASALRTAANEMRSGSPQ ERTFGQIAEGLADVSDAMREKDLSTMVADVSAFARKNPLVFLGGAALIGFAATRFAKASNEAASQVAHTPVSPTTPTTGD FS
Sequences:
>Translated_162_residues MTTQNTPGTGGTAPAATQAKETAADLAQHGKTAARDMAQDAAAAASDRAGEAKSAMADEVSGVASALRTAANEMRSGSPQ ERTFGQIAEGLADVSDAMREKDLSTMVADVSAFARKNPLVFLGGAALIGFAATRFAKASNEAASQVAHTPVSPTTPTTGD FS >Mature_161_residues TTQNTPGTGGTAPAATQAKETAADLAQHGKTAARDMAQDAAAAASDRAGEAKSAMADEVSGVASALRTAANEMRSGSPQE RTFGQIAEGLADVSDAMREKDLSTMVADVSAFARKNPLVFLGGAALIGFAATRFAKASNEAASQVAHTPVSPTTPTTGDF S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16303; Mature: 16172
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQNTPGTGGTAPAATQAKETAADLAQHGKTAARDMAQDAAAAASDRAGEAKSAMADEV CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH SGVASALRTAANEMRSGSPQERTFGQIAEGLADVSDAMREKDLSTMVADVSAFARKNPLV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE FLGGAALIGFAATRFAKASNEAASQVAHTPVSPTTPTTGDFS EECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TTQNTPGTGGTAPAATQAKETAADLAQHGKTAARDMAQDAAAAASDRAGEAKSAMADEV CCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH SGVASALRTAANEMRSGSPQERTFGQIAEGLADVSDAMREKDLSTMVADVSAFARKNPLV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE FLGGAALIGFAATRFAKASNEAASQVAHTPVSPTTPTTGDFS EECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA