The gene/protein map for NC_011978 is currently unavailable.
Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054694

Identifier: 89054694

GI number: 89054694

Start: 2212681

End: 2213097

Strand: Direct

Name: 89054694

Synonym: Jann_2203

Alternate gene names: NA

Gene position: 2212681-2213097 (Clockwise)

Preceding gene: 89054690

Following gene: 89054695

Centisome position: 51.24

GC content: 58.51

Gene sequence:

>417_bases
ATGGGTGATGTAAGGCAATTGCGGGACAAGCAGCCGGAGAACGAGAAGATCACAATCAATCTGGGCTTCGTTGACCTTGG
GCGGATCGACCTGATGGTGCAGGAGGGGTTCTATTCGAACCGGAGCGATCTGATCCGCACGGCGATCCGCAATCAACTGG
ACACGCATACCGGCGTGGTCGATCAGACGCTTGAGCGGCACACGATGGAATTGGGACTGCGCGACTATACGGTCGCGGAT
CTCGAAGCGCTCAGAGATGCGGGCGAGGTGCTGCACGTGAAGGTCGTGGGGCTGGCGCGGATCAGCGCGGAAGTGACCCC
GGAACTGGCGCTGCAAACCATTGGATCGATCACCGTTTTGGGCGCTTTGCAGGCCAATAAAGATGTCAAGACGGCGCTCG
CCGACCGCATTAAGTAA

Upstream 100 bases:

>100_bases
AATATGTCTGCTGAGGGTACGTGGGGGCGGACGTGGTCAAAAAGGTATTGCGAACATCCGAAAAGCATCCATATAACATC
CACATGGATGGAGATGAAAT

Downstream 100 bases:

>100_bases
GATGCGCAACCCTTTATAAGGAATAGATAAATGAAGCTCTTTAACGTAGGCGCGATGCGCCCTGCGACCGATGAGGCGCG
TCTGTCGCGCGCCAATGAAC

Product: CopG family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator CopG Family; Transcriptional Regulator; Transcriptional Regulator CopG/Arc/MetJ Family; Transcription Regulator; CopG/Arc/MetJ Family Transcriptional Regulator; CopG/Arc/MetJ Family Transcriptional Regulator

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MGDVRQLRDKQPENEKITINLGFVDLGRIDLMVQEGFYSNRSDLIRTAIRNQLDTHTGVVDQTLERHTMELGLRDYTVAD
LEALRDAGEVLHVKVVGLARISAEVTPELALQTIGSITVLGALQANKDVKTALADRIK

Sequences:

>Translated_138_residues
MGDVRQLRDKQPENEKITINLGFVDLGRIDLMVQEGFYSNRSDLIRTAIRNQLDTHTGVVDQTLERHTMELGLRDYTVAD
LEALRDAGEVLHVKVVGLARISAEVTPELALQTIGSITVLGALQANKDVKTALADRIK
>Mature_137_residues
GDVRQLRDKQPENEKITINLGFVDLGRIDLMVQEGFYSNRSDLIRTAIRNQLDTHTGVVDQTLERHTMELGLRDYTVADL
EALRDAGEVLHVKVVGLARISAEVTPELALQTIGSITVLGALQANKDVKTALADRIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15293; Mature: 15162

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDVRQLRDKQPENEKITINLGFVDLGRIDLMVQEGFYSNRSDLIRTAIRNQLDTHTGVV
CCCHHHHHCCCCCCCEEEEEECEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHH
DQTLERHTMELGLRDYTVADLEALRDAGEVLHVKVVGLARISAEVTPELALQTIGSITVL
HHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEHHHHHHHHCCHHHHHHHHHHHHEE
GALQANKDVKTALADRIK
EHHHCCCHHHHHHHHCCC
>Mature Secondary Structure 
GDVRQLRDKQPENEKITINLGFVDLGRIDLMVQEGFYSNRSDLIRTAIRNQLDTHTGVV
CCHHHHHCCCCCCCEEEEEECEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHH
DQTLERHTMELGLRDYTVADLEALRDAGEVLHVKVVGLARISAEVTPELALQTIGSITVL
HHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEHHHHHHHHCCHHHHHHHHHHHHEE
GALQANKDVKTALADRIK
EHHHCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA