| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yaiI [C]
Identifier: 89054659
GI number: 89054659
Start: 2174407
End: 2174877
Strand: Direct
Name: yaiI [C]
Synonym: Jann_2168
Alternate gene names: 89054659
Gene position: 2174407-2174877 (Clockwise)
Preceding gene: 89054658
Following gene: 89054660
Centisome position: 50.36
GC content: 67.3
Gene sequence:
>471_bases TTGACTGACGAGACACGTCAAGGGCGGCTGATCCTGATCGACGGCGACGCCTGCCCGGTGAAGGAGGAAATCTACACCTG CGCCTATCGCCACAAGATCCCCGTGCGCCTGGTCGCGGCCAGCTACCTGCGCCACCCCGATCATCCGCTGATCACCATGG TGATGGCGGGCGATGCGTTCGATGCCGCCGATGATGTGATTGCGGAGGCCGCGGCCCCCGGCACGCTGGTCGTCACGGGT GACATCCTGCTGGCGGAGCGGTGCCTGGAGGCGGGGTCAGTCGTGTTGAACCACAAGGGCGGGGCCTATACCGCGAACTC CATCGGGGCGCAGGTGGCGACGCGTGCGATCATGGCGGATATCCGCGCCGGCCTGGACGGGCAGGGCATCGGCGGGCAGA AGCCGTTCTCCAAGGCGGACCGGTCGGCCTTCTCCAACGCGCTGGAGACGGCGCTGCGGCGCTTGAAATAG
Upstream 100 bases:
>100_bases GGCTGGTCGGAGATGACGTCGATCACATTGCAGGGTGGAAAGCTGCACCTGCGCGAGGTCGGGGGCGGCACAATGGTCAT TCCATTCCCGGAGGGGCATT
Downstream 100 bases:
>100_bases GGACAAAAGGGGCGTAGGTGCGCCTCTTCTGTTTAAGGTGCCTGCCCATGTCCTTCACGCTTGCCATCGTTGGCCGCCCC AATGTGGGCAAATCCACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTDETRQGRLILIDGDACPVKEEIYTCAYRHKIPVRLVAASYLRHPDHPLITMVMAGDAFDAADDVIAEAAAPGTLVVTG DILLAERCLEAGSVVLNHKGGAYTANSIGAQVATRAIMADIRAGLDGQGIGGQKPFSKADRSAFSNALETALRRLK
Sequences:
>Translated_156_residues MTDETRQGRLILIDGDACPVKEEIYTCAYRHKIPVRLVAASYLRHPDHPLITMVMAGDAFDAADDVIAEAAAPGTLVVTG DILLAERCLEAGSVVLNHKGGAYTANSIGAQVATRAIMADIRAGLDGQGIGGQKPFSKADRSAFSNALETALRRLK >Mature_155_residues TDETRQGRLILIDGDACPVKEEIYTCAYRHKIPVRLVAASYLRHPDHPLITMVMAGDAFDAADDVIAEAAAPGTLVVTGD ILLAERCLEAGSVVLNHKGGAYTANSIGAQVATRAIMADIRAGLDGQGIGGQKPFSKADRSAFSNALETALRRLK
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family
Homologues:
Organism=Escherichia coli, GI87081732, Length=141, Percent_Identity=38.2978723404255, Blast_Score=90, Evalue=8e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2168_JANSC (Q28QC7)
Other databases:
- EMBL: CP000264 - RefSeq: YP_510110.1 - STRING: Q28QC7 - GeneID: 3934622 - GenomeReviews: CP000264_GR - KEGG: jan:Jann_2168 - eggNOG: COG1671 - HOGENOM: HBG363074 - OMA: PLASRCV - PhylomeDB: Q28QC7 - BioCyc: JSP290400:JANN_2168-MONOMER - HAMAP: MF_00489 - InterPro: IPR003791
Pfam domain/function: PF02639 DUF188
EC number: NA
Molecular weight: Translated: 16533; Mature: 16402
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDETRQGRLILIDGDACPVKEEIYTCAYRHKIPVRLVAASYLRHPDHPLITMVMAGDAF CCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCCC DAADDVIAEAAAPGTLVVTGDILLAERCLEAGSVVLNHKGGAYTANSIGAQVATRAIMAD CHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCEEEECCCCCEEHHHHHHHHHHHHHHHH IRAGLDGQGIGGQKPFSKADRSAFSNALETALRRLK HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDETRQGRLILIDGDACPVKEEIYTCAYRHKIPVRLVAASYLRHPDHPLITMVMAGDAF CCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCCC DAADDVIAEAAAPGTLVVTGDILLAERCLEAGSVVLNHKGGAYTANSIGAQVATRAIMAD CHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCEEEECCCCCEEHHHHHHHHHHHHHHHH IRAGLDGQGIGGQKPFSKADRSAFSNALETALRRLK HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA