| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is engA
Identifier: 89054660
GI number: 89054660
Start: 2174925
End: 2176364
Strand: Direct
Name: engA
Synonym: Jann_2169
Alternate gene names: 89054660
Gene position: 2174925-2176364 (Clockwise)
Preceding gene: 89054659
Following gene: 89054661
Centisome position: 50.37
GC content: 63.54
Gene sequence:
>1440_bases ATGTCCTTCACGCTTGCCATCGTTGGCCGCCCCAATGTGGGCAAATCCACGCTATTCAACCGGCTCGTGGGCCGGAAGCT GGCGCTGGTGGATGACCAGCCCGGGGTGACGCGCGATCTGCGGGAAGGGGCCGCGCGGCTGGCGGATCTGCGGTTTACGG TGATTGACACGGCGGGACTGGAAGATGCCAACGACGACAGCCTGGAAGGGCGGATGCGCCGGTTGACGGAACGCGCCGTT TCTATGGCGGATGCGACGCTGTTTGTGATGGATGCGCGCGCGGGCGTCACGACCAATGATCTGGTCTTCGCCGACATCCT GCGCAAGTCGGGCCGCCCGGTGGTGCTGGCCGCCAACAAGGCGGAGGGCAATGCAGGCCAATCCGGTCTGCTGGACGCCT ATTCCCTGGGTCTGGGCGAACCGCTGGCCCTGTCGGCGGAACACGGCGAGGGGATGGCCGATCTGGTTCAGGTCCTGCGC CCGATGATCGAGGCCGCAGCGTCTGCCGAGGAGGCCGAGACGGATGTTGATGTGGAGGGTGAAGATCGCGTCATAACGCA TTCGAAACCTTTGCAAATTGCAGTTGTGGGCAGGCCGAATGCGGGCAAATCCACGCTGATCAACCAGATCATCGGCGAAG ACCGCCTGCTGACGGGGCCGGAGGCCGGGATTACCCGCGACGCCATCGGCCTGACATTTGAATGGGACGATGTTCCGATG CGCATCTTCGACACGGCAGGTATGCGCAAACGGGCGAAGGTGCAGGAAAAGCTGGAGAAGTTGAGCGTCTCTGATGGGCT GCGCGCGGTGAAGTTTGCGGAGGTGGTCGTGGTGCTGCTGGACGCCGCGATCCCGTTCGAGAGCCAGGATCTGCGGATTG CCGATCTGGCGGAGCGGGAGGGGCGTGCGGTTGTCATTGCCGTCAACAAATGGGACGTGGAGCCTGAGAAACAACAGAAA CTCAAAGACTTGCGCGTCGGGCTCGAACGGCTCCTGCCGCAATTGCGCGGCGCGCCTCTGGTGACGGTGTCGGCGAAGAC GGGCAAGGGGCTGGACAAGCTCCACGCCGCGATCATGAAGATCCACGCGACCTGGAACACACGGATTTCCACCGCGCGCC TGAACCAATGGCTGGCCGCGATGATCGAGGCGCATCCGCCCCCCGCGCCGGGCGGTCGGCGCATCAAACTGCGCTACATG ACCCAGGCCAAGACGCGGCCCCCGGGGTTTGTGGTCATGTGTTCGCACCCGCAGAACCTGCCGGAGGCGTATTCGCGCTA TCTGGTCAACGGGTTGCGGCAGGATTTTGATATGCCCGGCACGCCGATCCGGCTGTGGATGCGCAGCCAGGCCGATGACA ACCCCTACAAGAACCGCAAGAAATCAACACCCTCGCGCCTCAACAAGCACGTCCGAAAGGGCGAGACGAAGAAGGGATGA
Upstream 100 bases:
>100_bases ACCGGTCGGCCTTCTCCAACGCGCTGGAGACGGCGCTGCGGCGCTTGAAATAGGGACAAAAGGGGCGTAGGTGCGCCTCT TCTGTTTAAGGTGCCTGCCC
Downstream 100 bases:
>100_bases CCCGGCGCGGGCTGCTCAGGGGCGGACTTTTTCTGGCCGGGGCGTGGGCGCTGATGGCGCGACCCTGGTCGTGGGGGCGC GCCGACGATATCACGACAGA
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MSFTLAIVGRPNVGKSTLFNRLVGRKLALVDDQPGVTRDLREGAARLADLRFTVIDTAGLEDANDDSLEGRMRRLTERAV SMADATLFVMDARAGVTTNDLVFADILRKSGRPVVLAANKAEGNAGQSGLLDAYSLGLGEPLALSAEHGEGMADLVQVLR PMIEAAASAEEAETDVDVEGEDRVITHSKPLQIAVVGRPNAGKSTLINQIIGEDRLLTGPEAGITRDAIGLTFEWDDVPM RIFDTAGMRKRAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDAAIPFESQDLRIADLAEREGRAVVIAVNKWDVEPEKQQK LKDLRVGLERLLPQLRGAPLVTVSAKTGKGLDKLHAAIMKIHATWNTRISTARLNQWLAAMIEAHPPPAPGGRRIKLRYM TQAKTRPPGFVVMCSHPQNLPEAYSRYLVNGLRQDFDMPGTPIRLWMRSQADDNPYKNRKKSTPSRLNKHVRKGETKKG
Sequences:
>Translated_479_residues MSFTLAIVGRPNVGKSTLFNRLVGRKLALVDDQPGVTRDLREGAARLADLRFTVIDTAGLEDANDDSLEGRMRRLTERAV SMADATLFVMDARAGVTTNDLVFADILRKSGRPVVLAANKAEGNAGQSGLLDAYSLGLGEPLALSAEHGEGMADLVQVLR PMIEAAASAEEAETDVDVEGEDRVITHSKPLQIAVVGRPNAGKSTLINQIIGEDRLLTGPEAGITRDAIGLTFEWDDVPM RIFDTAGMRKRAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDAAIPFESQDLRIADLAEREGRAVVIAVNKWDVEPEKQQK LKDLRVGLERLLPQLRGAPLVTVSAKTGKGLDKLHAAIMKIHATWNTRISTARLNQWLAAMIEAHPPPAPGGRRIKLRYM TQAKTRPPGFVVMCSHPQNLPEAYSRYLVNGLRQDFDMPGTPIRLWMRSQADDNPYKNRKKSTPSRLNKHVRKGETKKG >Mature_478_residues SFTLAIVGRPNVGKSTLFNRLVGRKLALVDDQPGVTRDLREGAARLADLRFTVIDTAGLEDANDDSLEGRMRRLTERAVS MADATLFVMDARAGVTTNDLVFADILRKSGRPVVLAANKAEGNAGQSGLLDAYSLGLGEPLALSAEHGEGMADLVQVLRP MIEAAASAEEAETDVDVEGEDRVITHSKPLQIAVVGRPNAGKSTLINQIIGEDRLLTGPEAGITRDAIGLTFEWDDVPMR IFDTAGMRKRAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDAAIPFESQDLRIADLAEREGRAVVIAVNKWDVEPEKQQKL KDLRVGLERLLPQLRGAPLVTVSAKTGKGLDKLHAAIMKIHATWNTRISTARLNQWLAAMIEAHPPPAPGGRRIKLRYMT QAKTRPPGFVVMCSHPQNLPEAYSRYLVNGLRQDFDMPGTPIRLWMRSQADDNPYKNRKKSTPSRLNKHVRKGETKKG
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=496, Percent_Identity=37.5, Blast_Score=308, Evalue=4e-85, Organism=Escherichia coli, GI2367268, Length=169, Percent_Identity=28.4023668639053, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788919, Length=167, Percent_Identity=26.9461077844311, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_JANSC (Q28QC6)
Other databases:
- EMBL: CP000264 - RefSeq: YP_510111.1 - ProteinModelPortal: Q28QC6 - SMR: Q28QC6 - STRING: Q28QC6 - GeneID: 3934623 - GenomeReviews: CP000264_GR - KEGG: jan:Jann_2169 - eggNOG: COG1160 - HOGENOM: HBG592135 - OMA: TRDRTYQ - PhylomeDB: Q28QC6 - ProtClustDB: PRK00093 - BioCyc: JSP290400:JANN_2169-MONOMER - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR016484 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR001806 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00449 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 52514; Mature: 52383
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTLAIVGRPNVGKSTLFNRLVGRKLALVDDQPGVTRDLREGAARLADLRFTVIDTAGL CCEEEEEEECCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHEEEEEEEECCC EDANDDSLEGRMRRLTERAVSMADATLFVMDARAGVTTNDLVFADILRKSGRPVVLAANK CCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECC AEGNAGQSGLLDAYSLGLGEPLALSAEHGEGMADLVQVLRPMIEAAASAEEAETDVDVEG CCCCCCCCCCHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCC EDRVITHSKPLQIAVVGRPNAGKSTLINQIIGEDRLLTGPEAGITRDAIGLTFEWDDVPM CCEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEECCCCE RIFDTAGMRKRAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDAAIPFESQDLRIADLAERE EEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHCCC GRAVVIAVNKWDVEPEKQQKLKDLRVGLERLLPQLRGAPLVTVSAKTGKGLDKLHAAIMK CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH IHATWNTRISTARLNQWLAAMIEAHPPPAPGGRRIKLRYMTQAKTRPPGFVVMCSHPQNL EEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCC PEAYSRYLVNGLRQDFDMPGTPIRLWMRSQADDNPYKNRKKSTPSRLNKHVRKGETKKG HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure SFTLAIVGRPNVGKSTLFNRLVGRKLALVDDQPGVTRDLREGAARLADLRFTVIDTAGL CEEEEEEECCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHEEEEEEEECCC EDANDDSLEGRMRRLTERAVSMADATLFVMDARAGVTTNDLVFADILRKSGRPVVLAANK CCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECC AEGNAGQSGLLDAYSLGLGEPLALSAEHGEGMADLVQVLRPMIEAAASAEEAETDVDVEG CCCCCCCCCCHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCC EDRVITHSKPLQIAVVGRPNAGKSTLINQIIGEDRLLTGPEAGITRDAIGLTFEWDDVPM CCEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEECCCCE RIFDTAGMRKRAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDAAIPFESQDLRIADLAERE EEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHCCC GRAVVIAVNKWDVEPEKQQKLKDLRVGLERLLPQLRGAPLVTVSAKTGKGLDKLHAAIMK CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH IHATWNTRISTARLNQWLAAMIEAHPPPAPGGRRIKLRYMTQAKTRPPGFVVMCSHPQNL EEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCC PEAYSRYLVNGLRQDFDMPGTPIRLWMRSQADDNPYKNRKKSTPSRLNKHVRKGETKKG HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA