| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is cbrB [H]
Identifier: 89054614
GI number: 89054614
Start: 2132322
End: 2133305
Strand: Direct
Name: cbrB [H]
Synonym: Jann_2123
Alternate gene names: 89054614
Gene position: 2132322-2133305 (Clockwise)
Preceding gene: 89054612
Following gene: 89054615
Centisome position: 49.38
GC content: 66.67
Gene sequence:
>984_bases ATGCGGGCCGGAAATACAATCCTTATAGCAGGAGCGATCTGCCTAGCTGTCCTCAGCTTGCACCTGGGTGTCCGGACCTA TGCCCCGGCGGAGATATGGCGCGCGTTAACAAGCGCGGACGCGGACGCGACCGCGATCATCGTCCGCGACCTCCGCGTGC CGCGCATGGTGCTGGCCGCCTTGATCGGTGCGGCCCTGGCCCTGTCAGGTCTGATGATGCAATCGGTGACGCGCAATCCA GTGGCGGAGCCCGGCCTTCTGGGCGTGAATGCAGGCGCGGCCTTTGCGGTCGTGGTTCTGCTGACCGTCCAACCGGGCGC GGGCGTATGGCTGGTCATAGGGGTTGCGGCGATGGGTGCGGCCCTCGCGGCTGCGTTGGTCTTTGGGCTCGCATTGTCCA TCGGCGCTGCGATGTCGCCGGTGCATCTGCTGCTGGCGGGGGTCACGGTGGCCGCGTTGTTGATGGCGGGCGTACAGGTG TTGATCATCCTCAACGAGCAGACGTTGGAAGAGCTTATCTTCTGGCTCTCCGGCTCCTTCGCGGACAGGCCTATTGTGGG GATCTCGGTCGTGGCGGCTGGATTGGGTCTGGGCGGCGGTCTGTGCCTGTTCCAAGCCCCTGCATTGGACGCTTTGGGGG CCGATGATGCGACCGCCACAGGCCTGGGCGTCGATGTCCCCCGCCTGCGGCTGCTGCTTCTGGGATGTGCTGCTTTGCTT GCGGGCTGTGCCGTGGCCCTGGCCGGGCCGATCGCCTTTGTGGGCCTTGTTGCGCCGCGTCTGGCACGGTTGAGCGGTGC ACGGGGCCACGCCCAGTTGATCCCCCGCGCGGTGCTGTTCGGCGTGCTCCTCGCCCTCTCCGCAGATCTGATCGCGCGCT TCGTCCTGTACCCGTCCGAGGCGCCCGTCAGCGCGGTGATGGCGCTGATCGGCGTTCCGATCCTGATCGGCCTGCTGCGC GGCACAAGGATGCGACTGGCATGA
Upstream 100 bases:
>100_bases GGTTGCAAGAATTGACAGGCGCATGGCGGATCGTCCTTGATGTTGAGTATTTTAGTCAGATAATAGGCTGACAGAAATAG TTAGAAATGCAAGGGTCAGA
Downstream 100 bases:
>100_bases CGGCCGCGCGCATCAGTTTGCCCGTGGCGCTCATGGCGCTGGCGCTTGTGGCCGCCGCGATGGGAAGCTCCTTCATGCCG CTTGACCGGATCATCGCGGC
Product: transport system permease
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MRAGNTILIAGAICLAVLSLHLGVRTYAPAEIWRALTSADADATAIIVRDLRVPRMVLAALIGAALALSGLMMQSVTRNP VAEPGLLGVNAGAAFAVVVLLTVQPGAGVWLVIGVAAMGAALAAALVFGLALSIGAAMSPVHLLLAGVTVAALLMAGVQV LIILNEQTLEELIFWLSGSFADRPIVGISVVAAGLGLGGGLCLFQAPALDALGADDATATGLGVDVPRLRLLLLGCAALL AGCAVALAGPIAFVGLVAPRLARLSGARGHAQLIPRAVLFGVLLALSADLIARFVLYPSEAPVSAVMALIGVPILIGLLR GTRMRLA
Sequences:
>Translated_327_residues MRAGNTILIAGAICLAVLSLHLGVRTYAPAEIWRALTSADADATAIIVRDLRVPRMVLAALIGAALALSGLMMQSVTRNP VAEPGLLGVNAGAAFAVVVLLTVQPGAGVWLVIGVAAMGAALAAALVFGLALSIGAAMSPVHLLLAGVTVAALLMAGVQV LIILNEQTLEELIFWLSGSFADRPIVGISVVAAGLGLGGGLCLFQAPALDALGADDATATGLGVDVPRLRLLLLGCAALL AGCAVALAGPIAFVGLVAPRLARLSGARGHAQLIPRAVLFGVLLALSADLIARFVLYPSEAPVSAVMALIGVPILIGLLR GTRMRLA >Mature_327_residues MRAGNTILIAGAICLAVLSLHLGVRTYAPAEIWRALTSADADATAIIVRDLRVPRMVLAALIGAALALSGLMMQSVTRNP VAEPGLLGVNAGAAFAVVVLLTVQPGAGVWLVIGVAAMGAALAAALVFGLALSIGAAMSPVHLLLAGVTVAALLMAGVQV LIILNEQTLEELIFWLSGSFADRPIVGISVVAAGLGLGGGLCLFQAPALDALGADDATATGLGVDVPRLRLLLLGCAALL AGCAVALAGPIAFVGLVAPRLARLSGARGHAQLIPRAVLFGVLLALSADLIARFVLYPSEAPVSAVMALIGVPILIGLLR GTRMRLA
Specific function: Part of the binding-protein-dependent transport system CbrABCD for uptake of the siderophore achromobactin. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786805, Length=302, Percent_Identity=38.0794701986755, Blast_Score=138, Evalue=4e-34, Organism=Escherichia coli, GI1790741, Length=280, Percent_Identity=35.7142857142857, Blast_Score=138, Evalue=5e-34, Organism=Escherichia coli, GI1790740, Length=313, Percent_Identity=36.1022364217252, Blast_Score=131, Evalue=5e-32, Organism=Escherichia coli, GI1788004, Length=275, Percent_Identity=33.0909090909091, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1786347, Length=284, Percent_Identity=33.8028169014084, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1786804, Length=269, Percent_Identity=32.3420074349442, Blast_Score=83, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 32872; Mature: 32872
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAGNTILIAGAICLAVLSLHLGVRTYAPAEIWRALTSADADATAIIVRDLRVPRMVLAA CCCCCEEEHHHHHHHHHHHHHHCHHCCCHHHHHHHHHCCCCCHHEEHHHHCCHHHHHHHH LIGAALALSGLMMQSVTRNPVAEPGLLGVNAGAAFAVVVLLTVQPGAGVWLVIGVAAMGA HHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHEECCCCCHHHHHHHHHHHH ALAAALVFGLALSIGAAMSPVHLLLAGVTVAALLMAGVQVLIILNEQTLEELIFWLSGSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEECHHHHHHHHHHHCCCC ADRPIVGISVVAAGLGLGGGLCLFQAPALDALGADDATATGLGVDVPRLRLLLLGCAALL CCCCCHHHHHHHHHHCCCCCHHHEECCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AGCAVALAGPIAFVGLVAPRLARLSGARGHAQLIPRAVLFGVLLALSADLIARFVLYPSE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC APVSAVMALIGVPILIGLLRGTRMRLA CCHHHHHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure MRAGNTILIAGAICLAVLSLHLGVRTYAPAEIWRALTSADADATAIIVRDLRVPRMVLAA CCCCCEEEHHHHHHHHHHHHHHCHHCCCHHHHHHHHHCCCCCHHEEHHHHCCHHHHHHHH LIGAALALSGLMMQSVTRNPVAEPGLLGVNAGAAFAVVVLLTVQPGAGVWLVIGVAAMGA HHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHEECCCCCHHHHHHHHHHHH ALAAALVFGLALSIGAAMSPVHLLLAGVTVAALLMAGVQVLIILNEQTLEELIFWLSGSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEECHHHHHHHHHHHCCCC ADRPIVGISVVAAGLGLGGGLCLFQAPALDALGADDATATGLGVDVPRLRLLLLGCAALL CCCCCHHHHHHHHHHCCCCCHHHEECCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AGCAVALAGPIAFVGLVAPRLARLSGARGHAQLIPRAVLFGVLLALSADLIARFVLYPSE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC APVSAVMALIGVPILIGLLRGTRMRLA CCHHHHHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8596459 [H]