| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054591
Identifier: 89054591
GI number: 89054591
Start: 2109237
End: 2110238
Strand: Direct
Name: 89054591
Synonym: Jann_2100
Alternate gene names: NA
Gene position: 2109237-2110238 (Clockwise)
Preceding gene: 89054578
Following gene: 89054592
Centisome position: 48.85
GC content: 64.07
Gene sequence:
>1002_bases ATGTCCGGCACGCTGATCACATCTGACGTCGATGTCGACGCGCACGGCAAACAGCAGGCCTACCTGCGGGTACCGCATTC GGTCCATCGCTCGGCCTATGGCTGGATCCCGGTTCCGATTGCGGTGATCCGAAACGGCGACGGCCCGACGCTGGTGATCT CGGCCGGGGTGCATGGCGATGAGTATGAGGGTCAGATCGCGGTGGCGACCCTGATCCGCACCCTTGATGCCACCGATATT CGTGGGCGGCTGATCCTGTTGCCGATGGTGAACGTCCCGGCGGCAGAGGCGGGTTGCCGGACGTCTCCCATCGACGCCGG TAACCTCAACCGGCTTTATCCGGGTGATCCAAAGGGCATGCCGTCCCAGATGATCGCGCATTTCCATGAAGAGGTGATCC TGCCGCTGGCCGATTATGCCGTTGATCTGCATTCGGGCGGGTCGTCCCTGATCTATCCGGCGACGGTGATGCGCGGGCCG TCCCATTCGCCGCAGGAAGAGGATGGCCTTGCCACGTTGGTCGACGCGTTCGATCTTCCCTATACATGGGTCTTCCAGGG CGGCGGCGGGCGCGACAGCACGGCGCGAACAGCCATGGGGGCGGCCAATCGAAAAGGTGTGATCAATGTGATGGCCGAAT TGGGCGGGGCAGGGTGCGTGACGCCCGATGTCCTGCATCGCACAGAGCGCGGGCTGCGACGGATCCTGCACGCGGTGGGC ATGCTGCCGGGCTATGTCCCGGATGGCGCCCAGGGAACACGGGCTGTGAGCGTCCAAGGGTCTGTCTATGCCTTCGAGAC GGGCGTGTTTGAGCCGCTCAAGTCCATTGGTGGCGATGTCGTTAAAGGGGAGGCCGTGGCGCATATCCATCACCCCGAAA CCCCCGGGAAAGCCCCAGACGTCGTCCTGTCACCTCATGCCGGGATGGTGCTGGCCATGCGGGCTATGGCGCAGGTCCGG CGCGGGGACGCGCTTTATCAGATCGCTGCGGATGCAGGTTGA
Upstream 100 bases:
>100_bases GTTCATATTTCGATAATGCCCGAAATATCGACGCTTGACCAGAGGTCGTGGATGCCGTAACCAAACGTCAATTCGGCAAT AGTCGAAATGAAGGGAGCCC
Downstream 100 bases:
>100_bases TATGAACTTGCAGCGGGTCATTCGGGACGGCGCGTCTGTGGCTGGCCGGGTCGGTCTCGCTAATGGGCTGGCCGCACTCC GGCGGGCCATGACTTTGCGC
Product: succinylglutamate desuccinylase/aspartoacylase
Products: NA
Alternate protein names: Ectoine Utilization Protein EutE; Deacylase; Succinylglutamate Desuccinylase / Aspartoacylase Family; Succinylglutamate Desuccinylase/Aspartoacylase Family; Succinylglutamatedesuccinylase/Aspartoacylase; Deacylase-Like; Succinylglutamate Desuccinylase; Serine Protease; Aminoacylase-2/Carboxypeptidase-Z Family Hydrolase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase; Succinate Dehydrogenase Subunit; Succinate Dehydrogenase Subunit Sdh
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MSGTLITSDVDVDAHGKQQAYLRVPHSVHRSAYGWIPVPIAVIRNGDGPTLVISAGVHGDEYEGQIAVATLIRTLDATDI RGRLILLPMVNVPAAEAGCRTSPIDAGNLNRLYPGDPKGMPSQMIAHFHEEVILPLADYAVDLHSGGSSLIYPATVMRGP SHSPQEEDGLATLVDAFDLPYTWVFQGGGGRDSTARTAMGAANRKGVINVMAELGGAGCVTPDVLHRTERGLRRILHAVG MLPGYVPDGAQGTRAVSVQGSVYAFETGVFEPLKSIGGDVVKGEAVAHIHHPETPGKAPDVVLSPHAGMVLAMRAMAQVR RGDALYQIAADAG
Sequences:
>Translated_333_residues MSGTLITSDVDVDAHGKQQAYLRVPHSVHRSAYGWIPVPIAVIRNGDGPTLVISAGVHGDEYEGQIAVATLIRTLDATDI RGRLILLPMVNVPAAEAGCRTSPIDAGNLNRLYPGDPKGMPSQMIAHFHEEVILPLADYAVDLHSGGSSLIYPATVMRGP SHSPQEEDGLATLVDAFDLPYTWVFQGGGGRDSTARTAMGAANRKGVINVMAELGGAGCVTPDVLHRTERGLRRILHAVG MLPGYVPDGAQGTRAVSVQGSVYAFETGVFEPLKSIGGDVVKGEAVAHIHHPETPGKAPDVVLSPHAGMVLAMRAMAQVR RGDALYQIAADAG >Mature_332_residues SGTLITSDVDVDAHGKQQAYLRVPHSVHRSAYGWIPVPIAVIRNGDGPTLVISAGVHGDEYEGQIAVATLIRTLDATDIR GRLILLPMVNVPAAEAGCRTSPIDAGNLNRLYPGDPKGMPSQMIAHFHEEVILPLADYAVDLHSGGSSLIYPATVMRGPS HSPQEEDGLATLVDAFDLPYTWVFQGGGGRDSTARTAMGAANRKGVINVMAELGGAGCVTPDVLHRTERGLRRILHAVGM LPGYVPDGAQGTRAVSVQGSVYAFETGVFEPLKSIGGDVVKGEAVAHIHHPETPGKAPDVVLSPHAGMVLAMRAMAQVRR GDALYQIAADAG
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35019; Mature: 34888
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTLITSDVDVDAHGKQQAYLRVPHSVHRSAYGWIPVPIAVIRNGDGPTLVISAGVHGD CCCCEEEECCCCCCCCCCCEEEECCHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCC EYEGQIAVATLIRTLDATDIRGRLILLPMVNVPAAEAGCRTSPIDAGNLNRLYPGDPKGM CCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSQMIAHFHEEVILPLADYAVDLHSGGSSLIYPATVMRGPSHSPQEEDGLATLVDAFDLP HHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEHHHCCCCCCCCCCCCCHHHHHHHHCCC YTWVFQGGGGRDSTARTAMGAANRKGVINVMAELGGAGCVTPDVLHRTERGLRRILHAVG EEEEEECCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH MLPGYVPDGAQGTRAVSVQGSVYAFETGVFEPLKSIGGDVVKGEAVAHIHHPETPGKAPD CCCCCCCCCCCCCEEEEECCCEEEEECCHHHHHHHCCCCEEECCEEEEEECCCCCCCCCC VVLSPHAGMVLAMRAMAQVRRGDALYQIAADAG EEECCCCCHHHHHHHHHHHHCCCEEEEEECCCC >Mature Secondary Structure SGTLITSDVDVDAHGKQQAYLRVPHSVHRSAYGWIPVPIAVIRNGDGPTLVISAGVHGD CCCEEEECCCCCCCCCCCEEEECCHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCC EYEGQIAVATLIRTLDATDIRGRLILLPMVNVPAAEAGCRTSPIDAGNLNRLYPGDPKGM CCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSQMIAHFHEEVILPLADYAVDLHSGGSSLIYPATVMRGPSHSPQEEDGLATLVDAFDLP HHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEHHHCCCCCCCCCCCCCHHHHHHHHCCC YTWVFQGGGGRDSTARTAMGAANRKGVINVMAELGGAGCVTPDVLHRTERGLRRILHAVG EEEEEECCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH MLPGYVPDGAQGTRAVSVQGSVYAFETGVFEPLKSIGGDVVKGEAVAHIHHPETPGKAPD CCCCCCCCCCCCCEEEEECCCEEEEECCHHHHHHHCCCCEEECCEEEEEECCCCCCCCCC VVLSPHAGMVLAMRAMAQVRRGDALYQIAADAG EEECCCCCHHHHHHHHHHHHCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA