| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is aqpZ [C]
Identifier: 89054592
GI number: 89054592
Start: 2110407
End: 2111078
Strand: Direct
Name: aqpZ [C]
Synonym: Jann_2101
Alternate gene names: 89054592
Gene position: 2110407-2111078 (Clockwise)
Preceding gene: 89054591
Following gene: 89054593
Centisome position: 48.87
GC content: 62.65
Gene sequence:
>672_bases ATGACGCTCGATCGCCGCCTGATGGCTGAATGGCTTGGCACCTTTTCGCTTCTGGCCACGGTCATCGGCTCAGGCATCAT GGCAGACCGGCTGGCCGACGGGAACGTGGCCATCGCCCTTTTGGGCAACACGATCCCGACCGGCGCGATCCTTGTTGTGT TGATCACCGTCTTCGGCCCGATCTCCGGCGCGCATTTCAACCCGGCCGTAACGCTGTCCTTCGCGCTGCGACGCGAGATC ACGCCGGGGGATGCCGGGCTTTATGTCGCCGTGCAGGTCTTTGGCGGCATCGTGGGTGTTTTGGCGGCCCATGTGATGTT TGAACACCCATTGCTCGACCCCTCGACCACCGCCCGCACGGGGCTAGGCCAATGGGCTGCAGAATTCGTGGCAACCTTCG GCCTTGTTGGCACCATCCTCGCTTGCCTGAAGGCGCGACCACAGGCGGTGCCGATGGCGGTCGGGCTCTATATTACGGCG GCCTATTGGTTCACATCGTCGACTTCCTTCGCGAACCCCGCCGTCACCATCGCGCGCGGGTTCTCGGACACATTTGCCGG GATCGCGCCCGCAGATGTCGCGGCGTTTATTGCCGTGCAACTGGTCGCGGCTGTCCTCGCGACCTGGTTTTTCGGCTGGT TGCTAAATGAAACAGAGGAGGACGTCGCATGA
Upstream 100 bases:
>100_bases TGGCCGCACTCCGGCGGGCCATGACTTTGCGCGGACACGCCCCCGATACATGCCGCACGACCGGACTGGCCCGGCTTTCG ATGCTTACGGAGGATCACCG
Downstream 100 bases:
>100_bases GTATCGTCATTCATCACAATCCTGGCTGCGGGACGTCGCGCAACGCGCTCAGTATCCTCCGCGCATCGGGGGTCGAGCCT GTTGTTGTGGAGTATCTGGA
Product: major intrinsic protein
Products: H2O [Cytoplasm] [C]
Alternate protein names: Phosphotyrosine Protein Phosphatase; MIP Family Protein; MIP Family Channel Protein; Low Molecular Weight Phosphotyrosine Protein Phosphatase; Transport Transmembrane Protein; Glycerol Uptake Transporter Protein MIP Family; Aquaglyceroporin Intrinsic Protein Family; MIP Family Permease; Mip Family Channel Protein; Channel Transporter; Transmembrane Aquaporin; Arsenate Reductase; Glycerol Uptake Facilitator Or Related Permease; Transmembrane ABC Transporter Protein; Transmembrane Abc Transporter Protein Intrinsic Protein; Integral Membrane Protein; Transmembrane ABC Transporter Protein Intrinsic Protein; Aquaporin/Glycerol Uptake Facilitator Protein
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MTLDRRLMAEWLGTFSLLATVIGSGIMADRLADGNVAIALLGNTIPTGAILVVLITVFGPISGAHFNPAVTLSFALRREI TPGDAGLYVAVQVFGGIVGVLAAHVMFEHPLLDPSTTARTGLGQWAAEFVATFGLVGTILACLKARPQAVPMAVGLYITA AYWFTSSTSFANPAVTIARGFSDTFAGIAPADVAAFIAVQLVAAVLATWFFGWLLNETEEDVA
Sequences:
>Translated_223_residues MTLDRRLMAEWLGTFSLLATVIGSGIMADRLADGNVAIALLGNTIPTGAILVVLITVFGPISGAHFNPAVTLSFALRREI TPGDAGLYVAVQVFGGIVGVLAAHVMFEHPLLDPSTTARTGLGQWAAEFVATFGLVGTILACLKARPQAVPMAVGLYITA AYWFTSSTSFANPAVTIARGFSDTFAGIAPADVAAFIAVQLVAAVLATWFFGWLLNETEEDVA >Mature_222_residues TLDRRLMAEWLGTFSLLATVIGSGIMADRLADGNVAIALLGNTIPTGAILVVLITVFGPISGAHFNPAVTLSFALRREIT PGDAGLYVAVQVFGGIVGVLAAHVMFEHPLLDPSTTARTGLGQWAAEFVATFGLVGTILACLKARPQAVPMAVGLYITAA YWFTSSTSFANPAVTIARGFSDTFAGIAPADVAAFIAVQLVAAVLATWFFGWLLNETEEDVA
Specific function: Channel That Permits Osmotically Driven Movement Of Water In Both Directions. It Is Involved In The Osmoregulation And In The Maintenance Of Cell Turgor During Volume Expansion In Rapidly Growing Cells. It Mediates Rapid Entry Or Exit Of Water In Response
COG id: COG0580
COG function: function code G; Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23301; Mature: 23170
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS00221 MIP ; PS00287 CYSTATIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDRRLMAEWLGTFSLLATVIGSGIMADRLADGNVAIALLGNTIPTGAILVVLITVFGP CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCC ISGAHFNPAVTLSFALRREITPGDAGLYVAVQVFGGIVGVLAAHVMFEHPLLDPSTTART CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH GLGQWAAEFVATFGLVGTILACLKARPQAVPMAVGLYITAAYWFTSSTSFANPAVTIARG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHEECC FSDTFAGIAPADVAAFIAVQLVAAVLATWFFGWLLNETEEDVA CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure TLDRRLMAEWLGTFSLLATVIGSGIMADRLADGNVAIALLGNTIPTGAILVVLITVFGP CCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCC ISGAHFNPAVTLSFALRREITPGDAGLYVAVQVFGGIVGVLAAHVMFEHPLLDPSTTART CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH GLGQWAAEFVATFGLVGTILACLKARPQAVPMAVGLYITAAYWFTSSTSFANPAVTIARG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHEECC FSDTFAGIAPADVAAFIAVQLVAAVLATWFFGWLLNETEEDVA CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O [Periplasm] [C]
Specific reaction: H2O [Periplasm] = H2O [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA