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The map label for this gene is ugpA [H]

Identifier: 89054567

GI number: 89054567

Start: 2084364

End: 2085245

Strand: Direct

Name: ugpA [H]

Synonym: Jann_2076

Alternate gene names: 89054567

Gene position: 2084364-2085245 (Clockwise)

Preceding gene: 89054566

Following gene: 89054568

Centisome position: 48.27

GC content: 59.3

Gene sequence:

>882_bases
GTGAAACGCGCCGCATTCGGGCATATCGGATTTCCGCTTCTGTTGCTGATCCCGCAACTCGCCATCATCGCGATCTTCTT
CTATTGGCCGGCCGGCTACGCGATCCAATCCTCCTTCTATCTGGAAGATCCCTTTGGCTTCGGCTCCACCTTTGTGGGGA
TGGAAAACTACACGCGGCTGACGCGCTCCTCCAGCTACATGTCGAGCGCCTGGTTCACCCTGATCTTCACCGCACTGGTC
ACATTTTTCGCGCTGGCCATAGCGCTTCTGCTGGCGGTCAAGGCCGATAAGGTGATCCGGGGCGCCAAGACCTATCGCAC
GCTGCTGATGTGGGTCTATGCCATCGCGCCGCCCGTCGCGGGCCTGATCGGGGTCATGCTGTTTGACCAGTCGCGCGGCA
ACCTCACACAGCTATTCGCCATGATGGGCTTCGATTTCCGCCTTGGCGTGAACTACTGGGATACGGCCAGCGCGATGATC
ACCGTGTCGATCTGGAAACAGATCCCCGTCAACTTCATCTTCTTCCTCTCGGGCTTGCAGGCGATCCCACGCTCGGTCCG
CGAAGCCGCGATGATCGACAACAACTCCGGCACAAGGCGGTTCTGGGACATCACCTTCCCGCTACTCGCCCCCACCGGTT
TCTTCCTGCTGATCATCAACATCACCTATTCGCTGTTCGAGACCTTCGGCATCATCGACACGCTGGTCAAAGGGGAGCCG
GGCAACAACCCGATGACGCTGGTCTACCGCGTCTTCGTGGATGGCTTCCGGGGCCAGGATCTGGGCGGATCCTCGGCGCA
ATCGGTGGTCCTGATGGTCCTCGTCCTGATCCTCACAATCGTGCAGTTCCGCTTCCTGGAACGCCGCATTCACTACACAT
AG

Upstream 100 bases:

>100_bases
TTAACGCCGTTAACCCAACGACTGCGCTGGCCGGGACCCAATGCCCGGCCAGTCGCCAATCAATCAAAAACACGAATAAC
CTCAGGGGGAGGCTCTACCC

Downstream 100 bases:

>100_bases
GGGGGCTTGGGACATGGCTGACATATCTGAAACCCACGCCGACGCCCGCGGCCAAACCGGGGCCGCGACCCGCCCCGCGA
AACGCTTCAAGTGGGAGACC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MKRAAFGHIGFPLLLLIPQLAIIAIFFYWPAGYAIQSSFYLEDPFGFGSTFVGMENYTRLTRSSSYMSSAWFTLIFTALV
TFFALAIALLLAVKADKVIRGAKTYRTLLMWVYAIAPPVAGLIGVMLFDQSRGNLTQLFAMMGFDFRLGVNYWDTASAMI
TVSIWKQIPVNFIFFLSGLQAIPRSVREAAMIDNNSGTRRFWDITFPLLAPTGFFLLIINITYSLFETFGIIDTLVKGEP
GNNPMTLVYRVFVDGFRGQDLGGSSAQSVVLMVLVLILTIVQFRFLERRIHYT

Sequences:

>Translated_293_residues
MKRAAFGHIGFPLLLLIPQLAIIAIFFYWPAGYAIQSSFYLEDPFGFGSTFVGMENYTRLTRSSSYMSSAWFTLIFTALV
TFFALAIALLLAVKADKVIRGAKTYRTLLMWVYAIAPPVAGLIGVMLFDQSRGNLTQLFAMMGFDFRLGVNYWDTASAMI
TVSIWKQIPVNFIFFLSGLQAIPRSVREAAMIDNNSGTRRFWDITFPLLAPTGFFLLIINITYSLFETFGIIDTLVKGEP
GNNPMTLVYRVFVDGFRGQDLGGSSAQSVVLMVLVLILTIVQFRFLERRIHYT
>Mature_293_residues
MKRAAFGHIGFPLLLLIPQLAIIAIFFYWPAGYAIQSSFYLEDPFGFGSTFVGMENYTRLTRSSSYMSSAWFTLIFTALV
TFFALAIALLLAVKADKVIRGAKTYRTLLMWVYAIAPPVAGLIGVMLFDQSRGNLTQLFAMMGFDFRLGVNYWDTASAMI
TVSIWKQIPVNFIFFLSGLQAIPRSVREAAMIDNNSGTRRFWDITFPLLAPTGFFLLIINITYSLFETFGIIDTLVKGEP
GNNPMTLVYRVFVDGFRGQDLGGSSAQSVVLMVLVLILTIVQFRFLERRIHYT

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=291, Percent_Identity=43.6426116838488, Blast_Score=239, Evalue=2e-64,
Organism=Escherichia coli, GI1790465, Length=250, Percent_Identity=26.8, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787570, Length=254, Percent_Identity=27.1653543307087, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32962; Mature: 32962

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAAFGHIGFPLLLLIPQLAIIAIFFYWPAGYAIQSSFYLEDPFGFGSTFVGMENYTRL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEECCEEEECCCCCCCEEECHHHHHHH
TRSSSYMSSAWFTLIFTALVTFFALAIALLLAVKADKVIRGAKTYRTLLMWVYAIAPPVA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLIGVMLFDQSRGNLTQLFAMMGFDFRLGVNYWDTASAMITVSIWKQIPVNFIFFLSGLQ
HHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCHHHHEEHHHHHHCCHHHHHHHHHHH
AIPRSVREAAMIDNNSGTRRFWDITFPLLAPTGFFLLIINITYSLFETFGIIDTLVKGEP
HHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GNNPMTLVYRVFVDGFRGQDLGGSSAQSVVLMVLVLILTIVQFRFLERRIHYT
CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRAAFGHIGFPLLLLIPQLAIIAIFFYWPAGYAIQSSFYLEDPFGFGSTFVGMENYTRL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEECCEEEECCCCCCCEEECHHHHHHH
TRSSSYMSSAWFTLIFTALVTFFALAIALLLAVKADKVIRGAKTYRTLLMWVYAIAPPVA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLIGVMLFDQSRGNLTQLFAMMGFDFRLGVNYWDTASAMITVSIWKQIPVNFIFFLSGLQ
HHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCHHHHEEHHHHHHCCHHHHHHHHHHH
AIPRSVREAAMIDNNSGTRRFWDITFPLLAPTGFFLLIINITYSLFETFGIIDTLVKGEP
HHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GNNPMTLVYRVFVDGFRGQDLGGSSAQSVVLMVLVLILTIVQFRFLERRIHYT
CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]