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The map label for this gene is ugpB [H]

Identifier: 89054566

GI number: 89054566

Start: 2082950

End: 2084251

Strand: Direct

Name: ugpB [H]

Synonym: Jann_2075

Alternate gene names: 89054566

Gene position: 2082950-2084251 (Clockwise)

Preceding gene: 89054565

Following gene: 89054567

Centisome position: 48.24

GC content: 62.37

Gene sequence:

>1302_bases
ATGAACCTTAAGAACACAATCGGCGCAGGCCTTGCATTCGGCCTTTTGGCCGGAGCGGCTCAGGCGCAGACCGAAATCGA
ATGGTGGCACGCGATGGGCGGCCAGCTGGGTGAGACCGTCAACCAGATGGCGGAAAACTTCAACGCGAGCCAGGGTGACT
ATGTCATCACGCCCGTCTTCAAAGGCACCTATGAAGAGACGCTGACCGCTGCCATCGCCGCCTTCCGCGCGGGCGAGCAG
CCCAACATCGTGCAGGTCTTCGATGCGGGTGCCGCGACGGTCATCGGCGCACAGGGCGCGACCATCCCGGTGGAGCAGCT
TTTGTCCGAGAACGGCGTTGATTTCGACCGTGAGGATTACATCTCGGGCGTGCGCAACTTCTATGCCGACGCCGATGGCC
AGATGATCGGCATGCCGTTCAACTCCTCCACGCCGATCATGTACTACAACGCCGATGCCCTGGAGGCCGCGGGTGTTGAG
CCGCCCGCCACCTGGGAAGAATTTGCCGAAGTCACAGCGCCCGCGCTGGCGGAAGCGGGCTATGTGCCGCTGGCCCAGTC
GCACCTGCCGTGGATCTTTACCGAGAATTTCTTCTCGCGCCACAACCTGCAGTTCGCGTCCAACGACAATGGCTACACCG
GCACCGATACCGAGATCATGGTCAACCACCCCGCCATCCGCGCGCATTTCACCGCGCTGACCGAATGGCAGGAGGCGGGC
TATTTTGAATGGTACGGCACCGGTTGGGCCGACAACCAGGACCCCTTTGAAGCGGGCGAAGTGGCCATGTGGCTCGGGTC
TTCGGGCTCGTTCGGTGGCATCGCCGACCGCGTTGACTTCAACTTCTCCGCCGCCATGCTGCCTTATTGGGAAGCCGTGA
CGACCGAGCCCACGCAGACCTTCATCGGGGGCGCGGCTCTGTTCGCGATGTCCGGCTTTGATGCGGAGCAGAATGAAGCC
ACAGCGGCCTTCTTCGACTTCCTCGACAGCGTCGATGCGCAGGTCATGTGGCACACGGAAACGGGCTATGTTCCGATCAC
GACCGCCGCTTATGAAGCGACGGCTGAGACCGGTCACTACGACACGTTCCCGGCAGCCGAAGTGGGTGTCCAGCAGCTGC
AGCTGCCCGCTGGTGAGTTCACCCGCGGCTACCGCATGGGCTTCTACGTCCAGATCCGTGACGTGATGAACCGTGAGTAT
GGCCGCATCCTGACCGGTGAAACCTCCGTCGATGACGCGTTCGAGACGATCGAAGCGGAGGCCAACGAGCTTCTGTCGCG
CTTCGCCCAGACGCAGGGCTGA

Upstream 100 bases:

>100_bases
TGACCCCGGCAATGAGATCAGGCCGCCCCCGCGAGAGCCGGGGCGGAGATATGCGCATCCTGCGGTCCGAAAAGGGGCCG
CGTCACGATGGGAGAGACTA

Downstream 100 bases:

>100_bases
AACTGCCATAGGTTAACGCCGTTAACCCAACGACTGCGCTGGCCGGGACCCAATGCCCGGCCAGTCGCCAATCAATCAAA
AACACGAATAACCTCAGGGG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MNLKNTIGAGLAFGLLAGAAQAQTEIEWWHAMGGQLGETVNQMAENFNASQGDYVITPVFKGTYEETLTAAIAAFRAGEQ
PNIVQVFDAGAATVIGAQGATIPVEQLLSENGVDFDREDYISGVRNFYADADGQMIGMPFNSSTPIMYYNADALEAAGVE
PPATWEEFAEVTAPALAEAGYVPLAQSHLPWIFTENFFSRHNLQFASNDNGYTGTDTEIMVNHPAIRAHFTALTEWQEAG
YFEWYGTGWADNQDPFEAGEVAMWLGSSGSFGGIADRVDFNFSAAMLPYWEAVTTEPTQTFIGGAALFAMSGFDAEQNEA
TAAFFDFLDSVDAQVMWHTETGYVPITTAAYEATAETGHYDTFPAAEVGVQQLQLPAGEFTRGYRMGFYVQIRDVMNREY
GRILTGETSVDDAFETIEAEANELLSRFAQTQG

Sequences:

>Translated_433_residues
MNLKNTIGAGLAFGLLAGAAQAQTEIEWWHAMGGQLGETVNQMAENFNASQGDYVITPVFKGTYEETLTAAIAAFRAGEQ
PNIVQVFDAGAATVIGAQGATIPVEQLLSENGVDFDREDYISGVRNFYADADGQMIGMPFNSSTPIMYYNADALEAAGVE
PPATWEEFAEVTAPALAEAGYVPLAQSHLPWIFTENFFSRHNLQFASNDNGYTGTDTEIMVNHPAIRAHFTALTEWQEAG
YFEWYGTGWADNQDPFEAGEVAMWLGSSGSFGGIADRVDFNFSAAMLPYWEAVTTEPTQTFIGGAALFAMSGFDAEQNEA
TAAFFDFLDSVDAQVMWHTETGYVPITTAAYEATAETGHYDTFPAAEVGVQQLQLPAGEFTRGYRMGFYVQIRDVMNREY
GRILTGETSVDDAFETIEAEANELLSRFAQTQG
>Mature_433_residues
MNLKNTIGAGLAFGLLAGAAQAQTEIEWWHAMGGQLGETVNQMAENFNASQGDYVITPVFKGTYEETLTAAIAAFRAGEQ
PNIVQVFDAGAATVIGAQGATIPVEQLLSENGVDFDREDYISGVRNFYADADGQMIGMPFNSSTPIMYYNADALEAAGVE
PPATWEEFAEVTAPALAEAGYVPLAQSHLPWIFTENFFSRHNLQFASNDNGYTGTDTEIMVNHPAIRAHFTALTEWQEAG
YFEWYGTGWADNQDPFEAGEVAMWLGSSGSFGGIADRVDFNFSAAMLPYWEAVTTEPTQTFIGGAALFAMSGFDAEQNEA
TAAFFDFLDSVDAQVMWHTETGYVPITTAAYEATAETGHYDTFPAAEVGVQQLQLPAGEFTRGYRMGFYVQIRDVMNREY
GRILTGETSVDDAFETIEAEANELLSRFAQTQG

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=419, Percent_Identity=38.6634844868735, Blast_Score=301, Evalue=4e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47166; Mature: 47166

Theoretical pI: Translated: 3.77; Mature: 3.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKNTIGAGLAFGLLAGAAQAQTEIEWWHAMGGQLGETVNQMAENFNASQGDYVITPVF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECC
KGTYEETLTAAIAAFRAGEQPNIVQVFDAGAATVIGAQGATIPVEQLLSENGVDFDREDY
CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHCCCCCCCHHHH
ISGVRNFYADADGQMIGMPFNSSTPIMYYNADALEAAGVEPPATWEEFAEVTAPALAEAG
HHHHHHHHCCCCCCEEEECCCCCCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHCC
YVPLAQSHLPWIFTENFFSRHNLQFASNDNGYTGTDTEIMVNHPAIRAHFTALTEWQEAG
CCCCHHCCCCEEEECCHHHHCCEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCC
YFEWYGTGWADNQDPFEAGEVAMWLGSSGSFGGIADRVDFNFSAAMLPYWEAVTTEPTQT
CEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCHHHHHCCCCHHH
FIGGAALFAMSGFDAEQNEATAAFFDFLDSVDAQVMWHTETGYVPITTAAYEATAETGHY
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHEEHHCCCCCC
DTFPAAEVGVQQLQLPAGEFTRGYRMGFYVQIRDVMNREYGRILTGETSVDDAFETIEAE
CCCCHHHHHHHHHCCCCCHHCCCCEEEEEEEEHHHHCHHHCEEECCCCCHHHHHHHHHHH
ANELLSRFAQTQG
HHHHHHHHHHCCC
>Mature Secondary Structure
MNLKNTIGAGLAFGLLAGAAQAQTEIEWWHAMGGQLGETVNQMAENFNASQGDYVITPVF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECC
KGTYEETLTAAIAAFRAGEQPNIVQVFDAGAATVIGAQGATIPVEQLLSENGVDFDREDY
CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHCCCCCCCHHHH
ISGVRNFYADADGQMIGMPFNSSTPIMYYNADALEAAGVEPPATWEEFAEVTAPALAEAG
HHHHHHHHCCCCCCEEEECCCCCCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHCC
YVPLAQSHLPWIFTENFFSRHNLQFASNDNGYTGTDTEIMVNHPAIRAHFTALTEWQEAG
CCCCHHCCCCEEEECCHHHHCCEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCC
YFEWYGTGWADNQDPFEAGEVAMWLGSSGSFGGIADRVDFNFSAAMLPYWEAVTTEPTQT
CEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCHHHHHCCCCHHH
FIGGAALFAMSGFDAEQNEATAAFFDFLDSVDAQVMWHTETGYVPITTAAYEATAETGHY
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHEEHHCCCCCC
DTFPAAEVGVQQLQLPAGEFTRGYRMGFYVQIRDVMNREYGRILTGETSVDDAFETIEAE
CCCCHHHHHHHHHCCCCCHHCCCCEEEEEEEEHHHHCHHHCEEECCCCCHHHHHHHHHHH
ANELLSRFAQTQG
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA