Click here to switch to the map view.

The map label for this gene is yiaN [C]

Identifier: 89054392

GI number: 89054392

Start: 1890431

End: 1892785

Strand: Direct

Name: yiaN [C]

Synonym: Jann_1901

Alternate gene names: 89054392

Gene position: 1890431-1892785 (Clockwise)

Preceding gene: 89054391

Following gene: 89054397

Centisome position: 43.78

GC content: 62.68

Gene sequence:

>2355_bases
ATGCTGTTTGGATTGGACGGGGTCGAAATTGGCCTGATCATCGTGTTCCTCACGCTCTTTGGCGGGATCATGACGGGCTT
CCCGGTGGCGTTTTCCATCGGCGGTGCAGGCGTGATTTCCTTTGCGATCATTGCGGCGCTGGACAGTTCCGGCCTGCTGA
TCCATCAGGCGGTGGACGTGCGGGCCGACGAATACCTGGCCCTGATCGCCGACGGCGTCCCCCGAGAGACGATATCAACC
TTCCGATACCCGGAATTGCCCCGCATAGAAGAGGCCCTGTTCCCCGGTGGCTGGGAAGTGGCGCTGGATCGCAACCTGTC
GTTCATCGTCAACCGCATGAATGAGCGTGTGATTGCGGGACAATCCATCGAGATTCTGCTGGCCGTTCTGATGTTCGTGA
TGATGGGCATCACGCTGGAACGCTCCAAGATCGCCAACGACCTGCTGACCACGATGGCGCGCGTGTTTGGCCCGCTGCCC
GGCGGTCTGGCCGTGTCCATCGTGATCGTGGGCGCGTTTCTTGCGGCCTCCACCGGCATCGTCGGCGCGACCGTGGTAAC
CATGGGCCTGCTGGCCCTGCCCACGATGTTGCGCAACAACTATTCGCCTGAACTGGCCACGGGCGTCATCGCCGCGTCGG
GCACGTTGGGGCAGATCATTCCGCCCTCCATCGTGATCGTCCTGCTTGGCACATTGGCCGGGGACCTCTACGCCACCGGG
CAGGAGGCCCGCGCCGTGGCCGCTGGGTGCCGCGATGCATTGACCTATCTGGGGGAGCCTGCGGTTCTGTCGGTGGGGAC
GCTGTTCCAGGCCGCGCTGCTGCCCGGGATCTTCCTGGCATTCCTCTATGGCGCCTACTCCTTTGGCTACGCGCTGGTGT
TCCCCTCCAAGGCGCCGGCCGTCCAGATGGGTGAAAGCTCGGGGGAACCGGTGACCCGCTCTGAGGGGCTGACATGGTTC
CTTGGCGTACCTGCGGCGATCATCATCGCGGTCAGCCTCGCGGCGTCAGGCGGTCTTGTGGGGGGTCAGTCGTTCAGCGT
CTCAGACATGTCCGATGGCCCGTCGAGTGCTGCACTGCGCACGAATGTGTCCGAGCAATGCGCCGCCGGTATGATCGAGC
TGCATGGCCAAGAGGCCTGGGACGCTGCCGTCGCCGAACAGGCCGCGATTGAGGCCGGGGGCGAGGACGAAGCCGCCCAT
GAGCGGTCCGATGAGGAGATGATCGCCGCCATTGATGCCGCGATTGCGGCGATCCCGCCTGTCGGCAGTGGCGTGGCCGC
GCTGTTCGTGTTTCTGGCGCTGGTCCTGACCCTTGCGCGTGGCATTTCGCCGTCCTCCTCGCCGGTGCCGCTGATGATTG
GCGGTCTGGGTGTGGCGCTCGCGTTCATGGCCGATATCGCGTTCCTTGGCCCATTGACCGGCCCGGGGACGACCTTCGCG
ATCCTCGCGATCCCGTTCTTTCTCACGGCCTATGGCTGCTACCACGCCGTTGGTCGCCTGTCCCAGAACGAGCTTCTGCG
CGTCGTCTTCCCGCCTCTGGTGCTGATCGTGGCGGTCCTGGGCTCGATCCTGGGCGGTATCACCAACCCCACGCCCGCTG
CGGCATTGGGGGCGGCAGGTGCCATCATGCTGGCCGCCTACCGAAAGTTGTCGGATGATCGGCGCGGCGCAAAGATGATA
ATTTGGGCGTCCTTTGCCATTGTCATCATGATCATCGTGGGCGTGAACTTTGACCTGCGCATGGGGCGCGCCGATGTGAA
CCTGGCTGACTGGATCGCCTATATCGTGACGCAGTTTGCCTACCACTTCGCGTTTTTCGGCCTGTTATTTGCCTGCTGGA
CGCTGCTGAAGACGTCGGTCCTTGGTCCGGTGGTGCGAGAGACGGCGAAGGTCACGAGCATGGTGTTCACGATCCTCATT
GGCTCTCAGGTCCTGAACCTGACGCTGATCGCCTTTGGCGGAGAGCATTACATCCAGCAATTCCTGCGGGCGTTTGATCA
GGAGTGGGTGGTGTTCCTGCTGGTGATGGCGATCCTGTTCGTTCTGGGCTTTGTGCTCGACTTCCTGGAGATCATCTACA
TCGTGATCCCCATCGTGGGGCCGGTGATCTATGGCGGCACGTTGGATCCCAAATGGGTGACGATCATGATCGCGGTGAAC
TTGCAGACGTCCTTCCTGACGCCACCGTTCGGATTTGCGCTCTTCTACCTTCGAGGGGTCGCGCCGAAATCGGTGACGAC
CGGGCATATCTACCGAGGGGTGCTGCCATTCGTCGGCATCCAGGTGTTGGGCCTCGCGATCCTGTGGTTCTTCCCGGGCA
TCGTGACCATTGTGCCGGATCTGCTGCCGAACTGA

Upstream 100 bases:

>100_bases
ATCCACTAGGCATCATGGGCCCCTCCGCCCGCGTGCGGAGGCCTGATCAACGACGAGTGCAGCACCGACTGTACGCAACG
ACAAAAGAATGGGGACAGCC

Downstream 100 bases:

>100_bases
GGTTAATCCGGTCGAGATTGCGGAAAGGGGGGCCTGCGGCCTCCCTTTTTCGTACCAACCGCCTCCGCCATGCTCCGCAT
GTTCTCGGCGCTGGTCCGTC

Product: TRAP C4-dicarboxylate transport system permease DctM

Products: NA

Alternate protein names: Trap Dicarboxylate Transporter Dctm Subunit; TRAP Dicarboxylate Transporter Subunit DctM; TRAP Transporter DctM Subunit; TRAP Transporter DctM-Like Membrane Protein; TRAP Dicarboxylate Transporter- DctM Subunit; TRAP Transporter DctM Subunit Subfamily; TRAP Transporter Large Transmembrane Protein; Mannitol Transporter; TRAP Dicarboxylate Transporter; C4-Dicarboxylate Transporter Family Protein DctM Subunit; TRAP Mannitol/C4-Dicarboxylate Transporter; C4 Dicarboxylate ABC Transporter Permease; Trap Dicarboxylate Transporter- Dctm Subunit; Tripartite Transporter Large Subunit; TRAP C4-Dicarboxylate Transporter Permease DctM Subunit; C4-Dicarboxylate Transporter; TRAP-T Family Tripartite Transporter; C4 Dicarboxylate Transporter Permease; TRAP Family Transmembrane Transporter Protein; C4-Dicarboxylate Transporter Permease; Permease Component Of C4 Dicarboxylate Transporter; C4-Dicarboxylate Transporter Large Subunit; Trap-Type Transport System Large Permease Component; TRAP-Type Transporter Large Permease Component; TRAP Transporter DctM-Like Subunit Family Protein; TRAP-Type Transport System Large Permease Component; TRAP Dicarboxylate Transporter DctM Subunit Protein; TRAP Transporter; TRAP-Type Large Permease Component; Large Permease Of TRAP-Type Transporter; TRAP C4-Dicarboxylate Transport System PermeaseDctM Subunit; TRAP C4-Dicarboxylate Transport System Permease; TRAP Transporter DctM Family Protein; DctM-Like Transporter Family Protein; TRAP Transporter DctM Related Transmembrane Protein

Number of amino acids: Translated: 784; Mature: 784

Protein sequence:

>784_residues
MLFGLDGVEIGLIIVFLTLFGGIMTGFPVAFSIGGAGVISFAIIAALDSSGLLIHQAVDVRADEYLALIADGVPRETIST
FRYPELPRIEEALFPGGWEVALDRNLSFIVNRMNERVIAGQSIEILLAVLMFVMMGITLERSKIANDLLTTMARVFGPLP
GGLAVSIVIVGAFLAASTGIVGATVVTMGLLALPTMLRNNYSPELATGVIAASGTLGQIIPPSIVIVLLGTLAGDLYATG
QEARAVAAGCRDALTYLGEPAVLSVGTLFQAALLPGIFLAFLYGAYSFGYALVFPSKAPAVQMGESSGEPVTRSEGLTWF
LGVPAAIIIAVSLAASGGLVGGQSFSVSDMSDGPSSAALRTNVSEQCAAGMIELHGQEAWDAAVAEQAAIEAGGEDEAAH
ERSDEEMIAAIDAAIAAIPPVGSGVAALFVFLALVLTLARGISPSSSPVPLMIGGLGVALAFMADIAFLGPLTGPGTTFA
ILAIPFFLTAYGCYHAVGRLSQNELLRVVFPPLVLIVAVLGSILGGITNPTPAAALGAAGAIMLAAYRKLSDDRRGAKMI
IWASFAIVIMIIVGVNFDLRMGRADVNLADWIAYIVTQFAYHFAFFGLLFACWTLLKTSVLGPVVRETAKVTSMVFTILI
GSQVLNLTLIAFGGEHYIQQFLRAFDQEWVVFLLVMAILFVLGFVLDFLEIIYIVIPIVGPVIYGGTLDPKWVTIMIAVN
LQTSFLTPPFGFALFYLRGVAPKSVTTGHIYRGVLPFVGIQVLGLAILWFFPGIVTIVPDLLPN

Sequences:

>Translated_784_residues
MLFGLDGVEIGLIIVFLTLFGGIMTGFPVAFSIGGAGVISFAIIAALDSSGLLIHQAVDVRADEYLALIADGVPRETIST
FRYPELPRIEEALFPGGWEVALDRNLSFIVNRMNERVIAGQSIEILLAVLMFVMMGITLERSKIANDLLTTMARVFGPLP
GGLAVSIVIVGAFLAASTGIVGATVVTMGLLALPTMLRNNYSPELATGVIAASGTLGQIIPPSIVIVLLGTLAGDLYATG
QEARAVAAGCRDALTYLGEPAVLSVGTLFQAALLPGIFLAFLYGAYSFGYALVFPSKAPAVQMGESSGEPVTRSEGLTWF
LGVPAAIIIAVSLAASGGLVGGQSFSVSDMSDGPSSAALRTNVSEQCAAGMIELHGQEAWDAAVAEQAAIEAGGEDEAAH
ERSDEEMIAAIDAAIAAIPPVGSGVAALFVFLALVLTLARGISPSSSPVPLMIGGLGVALAFMADIAFLGPLTGPGTTFA
ILAIPFFLTAYGCYHAVGRLSQNELLRVVFPPLVLIVAVLGSILGGITNPTPAAALGAAGAIMLAAYRKLSDDRRGAKMI
IWASFAIVIMIIVGVNFDLRMGRADVNLADWIAYIVTQFAYHFAFFGLLFACWTLLKTSVLGPVVRETAKVTSMVFTILI
GSQVLNLTLIAFGGEHYIQQFLRAFDQEWVVFLLVMAILFVLGFVLDFLEIIYIVIPIVGPVIYGGTLDPKWVTIMIAVN
LQTSFLTPPFGFALFYLRGVAPKSVTTGHIYRGVLPFVGIQVLGLAILWFFPGIVTIVPDLLPN
>Mature_784_residues
MLFGLDGVEIGLIIVFLTLFGGIMTGFPVAFSIGGAGVISFAIIAALDSSGLLIHQAVDVRADEYLALIADGVPRETIST
FRYPELPRIEEALFPGGWEVALDRNLSFIVNRMNERVIAGQSIEILLAVLMFVMMGITLERSKIANDLLTTMARVFGPLP
GGLAVSIVIVGAFLAASTGIVGATVVTMGLLALPTMLRNNYSPELATGVIAASGTLGQIIPPSIVIVLLGTLAGDLYATG
QEARAVAAGCRDALTYLGEPAVLSVGTLFQAALLPGIFLAFLYGAYSFGYALVFPSKAPAVQMGESSGEPVTRSEGLTWF
LGVPAAIIIAVSLAASGGLVGGQSFSVSDMSDGPSSAALRTNVSEQCAAGMIELHGQEAWDAAVAEQAAIEAGGEDEAAH
ERSDEEMIAAIDAAIAAIPPVGSGVAALFVFLALVLTLARGISPSSSPVPLMIGGLGVALAFMADIAFLGPLTGPGTTFA
ILAIPFFLTAYGCYHAVGRLSQNELLRVVFPPLVLIVAVLGSILGGITNPTPAAALGAAGAIMLAAYRKLSDDRRGAKMI
IWASFAIVIMIIVGVNFDLRMGRADVNLADWIAYIVTQFAYHFAFFGLLFACWTLLKTSVLGPVVRETAKVTSMVFTILI
GSQVLNLTLIAFGGEHYIQQFLRAFDQEWVVFLLVMAILFVLGFVLDFLEIIYIVIPIVGPVIYGGTLDPKWVTIMIAVN
LQTSFLTPPFGFALFYLRGVAPKSVTTGHIYRGVLPFVGIQVLGLAILWFFPGIVTIVPDLLPN

Specific function: Unknown

COG id: COG4664

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, large permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82430; Mature: 82430

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFGLDGVEIGLIIVFLTLFGGIMTGFPVAFSIGGAGVISFAIIAALDSSGLLIHQAVDV
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHHCCCCEEEEHHHHC
RADEYLALIADGVPRETISTFRYPELPRIEEALFPGGWEVALDRNLSFIVNRMNERVIAG
CHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCC
QSIEILLAVLMFVMMGITLERSKIANDLLTTMARVFGPLPGGLAVSIVIVGAFLAASTGI
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCH
VGATVVTMGLLALPTMLRNNYSPELATGVIAASGTLGQIIPPSIVIVLLGTLAGDLYATG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
QEARAVAAGCRDALTYLGEPAVLSVGTLFQAALLPGIFLAFLYGAYSFGYALVFPSKAPA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCC
VQMGESSGEPVTRSEGLTWFLGVPAAIIIAVSLAASGGLVGGQSFSVSDMSDGPSSAALR
EECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
TNVSEQCAAGMIELHGQEAWDAAVAEQAAIEAGGEDEAAHERSDEEMIAAIDAAIAAIPP
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHCCC
VGSGVAALFVFLALVLTLARGISPSSSPVPLMIGGLGVALAFMADIAFLGPLTGPGTTFA
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHH
ILAIPFFLTAYGCYHAVGRLSQNELLRVVFPPLVLIVAVLGSILGGITNPTPAAALGAAG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
AIMLAAYRKLSDDRRGAKMIIWASFAIVIMIIVGVNFDLRMGRADVNLADWIAYIVTQFA
HHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHH
YHFAFFGLLFACWTLLKTSVLGPVVRETAKVTSMVFTILIGSQVLNLTLIAFGGEHYIQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHH
FLRAFDQEWVVFLLVMAILFVLGFVLDFLEIIYIVIPIVGPVIYGGTLDPKWVTIMIAVN
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE
LQTSFLTPPFGFALFYLRGVAPKSVTTGHIYRGVLPFVGIQVLGLAILWFFPGIVTIVPD
CCHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLPN
HCCC
>Mature Secondary Structure
MLFGLDGVEIGLIIVFLTLFGGIMTGFPVAFSIGGAGVISFAIIAALDSSGLLIHQAVDV
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHHCCCCEEEEHHHHC
RADEYLALIADGVPRETISTFRYPELPRIEEALFPGGWEVALDRNLSFIVNRMNERVIAG
CHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCC
QSIEILLAVLMFVMMGITLERSKIANDLLTTMARVFGPLPGGLAVSIVIVGAFLAASTGI
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCH
VGATVVTMGLLALPTMLRNNYSPELATGVIAASGTLGQIIPPSIVIVLLGTLAGDLYATG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
QEARAVAAGCRDALTYLGEPAVLSVGTLFQAALLPGIFLAFLYGAYSFGYALVFPSKAPA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCC
VQMGESSGEPVTRSEGLTWFLGVPAAIIIAVSLAASGGLVGGQSFSVSDMSDGPSSAALR
EECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
TNVSEQCAAGMIELHGQEAWDAAVAEQAAIEAGGEDEAAHERSDEEMIAAIDAAIAAIPP
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHCCC
VGSGVAALFVFLALVLTLARGISPSSSPVPLMIGGLGVALAFMADIAFLGPLTGPGTTFA
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHH
ILAIPFFLTAYGCYHAVGRLSQNELLRVVFPPLVLIVAVLGSILGGITNPTPAAALGAAG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
AIMLAAYRKLSDDRRGAKMIIWASFAIVIMIIVGVNFDLRMGRADVNLADWIAYIVTQFA
HHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHH
YHFAFFGLLFACWTLLKTSVLGPVVRETAKVTSMVFTILIGSQVLNLTLIAFGGEHYIQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHH
FLRAFDQEWVVFLLVMAILFVLGFVLDFLEIIYIVIPIVGPVIYGGTLDPKWVTIMIAVN
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE
LQTSFLTPPFGFALFYLRGVAPKSVTTGHIYRGVLPFVGIQVLGLAILWFFPGIVTIVPD
CCHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLPN
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA