| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is ykvY [H]
Identifier: 89054320
GI number: 89054320
Start: 1815618
End: 1816775
Strand: Direct
Name: ykvY [H]
Synonym: Jann_1829
Alternate gene names: 89054320
Gene position: 1815618-1816775 (Clockwise)
Preceding gene: 89054319
Following gene: 89054321
Centisome position: 42.05
GC content: 64.51
Gene sequence:
>1158_bases ATGACACCGGATCGCGGCTTTCCGGACACGGAGTTCCAGGCCCGTACCGCCCGTGCGCAGTCGATGATGGAACAGGCAGG TCTGGGCGCGCTGCTCCTGACGACGGAGCCGGAAGTGCGCTACTATACCGGGTTTCTGACGCGCTTCTGGGAAAGCCCCA CACGCCCCTGGTTCGTTGTGATCCCGGCCTCTGGTGCGCCCATCGCCGTGATCCCCAGCATTGGCGCGCACCTGATGGGA CAGACTTGGATCACAGACATCCGCACATGGGCCGCGCCCGATTATGACGATGACGGTGTGGGTCTGTTGGCCGAAACACT GTGCGAGATTACGCCTGCCGATGCTCATGTCGGGCTTGCCGACCAGATGGAAAGCCACCTGCGGATGCCGCTTTCCAGTC TTCGTAGGCTGGAGCACTCCATCGGCCCCCGCCGCATCACTGGCGACGCGACCATCACGCGCCGCCTGCGCCTGGTGAAA TCGCCGTTGGAACTGGCCAAGATCACCCATGCGGTCCAGATCGCCGACCGTGCCTTTGACCGTGTGCCAGAGGTTGCGCG GACGGGCATATCCCTGTCGCAGGTCTTTCGCGATTTTCAACGGCTGTGTCTGGAGGAGGGCGCCGATTGGGTGCCCTATC TGGCTGGCGCGGCAGCGGTAGGGGGATACGGTGACGTCATCTCCCCCGCGACCGATGCGCCGCTGGCTTTGGGGGATGTC CTGATGCTTGACACCGGCCTCATCTGGGACGGATACTTCTGCGACTTCGACCGGAACTTCAGCCTGGGGCCGCCAGATGC ACAGGTTGCGGACGGCCACGCGGCCCTGATCGCGGCGACACAGGCAGGACATGCGGTTGCCAAGCCGGGCGCACGGATCT GCGATCTGTTCCACGCGATGAATGATATCGTGAGCCCGGGCAGTGCGGCGTCGGATGCGGGGCGGCTGGGGCACGGGCTG GGGATGCAGCTGACGGAATGGCCCTCAATCATCGCCGCCGACACGACGGTGCTGGAGGAGGGGATGGTGCTGACCCTGGA GCCGGGGATCACGCTGCCGTCGGGCAAGATCCTGGTCCATGAAGAGAATATCGTCATCGAAGGGCAGGGCGCGCGGTATC TGTCGCGGCCTCAACCCCCGGAGATCCGTGTCATATGA
Upstream 100 bases:
>100_bases CGGGCGCGGCGGGGCTTGCGGGTTTGGCTGTGGCGGCAAGCGGTGAGTTTGGGCTGGACGCCACGTCGCGCGTAATGGTC ATCCTTAGCGAGGGACCCGA
Downstream 100 bases:
>100_bases AGAGCTTGCCCTACACCTTGTCGACGCATCGCCCGTCCCAGCTTGGCATGATCGTGCTGCAATCCGATGAGACGGTGGAG ATGGATCTGCGGCATCTTTT
Product: peptidase M24
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MTPDRGFPDTEFQARTARAQSMMEQAGLGALLLTTEPEVRYYTGFLTRFWESPTRPWFVVIPASGAPIAVIPSIGAHLMG QTWITDIRTWAAPDYDDDGVGLLAETLCEITPADAHVGLADQMESHLRMPLSSLRRLEHSIGPRRITGDATITRRLRLVK SPLELAKITHAVQIADRAFDRVPEVARTGISLSQVFRDFQRLCLEEGADWVPYLAGAAAVGGYGDVISPATDAPLALGDV LMLDTGLIWDGYFCDFDRNFSLGPPDAQVADGHAALIAATQAGHAVAKPGARICDLFHAMNDIVSPGSAASDAGRLGHGL GMQLTEWPSIIAADTTVLEEGMVLTLEPGITLPSGKILVHEENIVIEGQGARYLSRPQPPEIRVI
Sequences:
>Translated_385_residues MTPDRGFPDTEFQARTARAQSMMEQAGLGALLLTTEPEVRYYTGFLTRFWESPTRPWFVVIPASGAPIAVIPSIGAHLMG QTWITDIRTWAAPDYDDDGVGLLAETLCEITPADAHVGLADQMESHLRMPLSSLRRLEHSIGPRRITGDATITRRLRLVK SPLELAKITHAVQIADRAFDRVPEVARTGISLSQVFRDFQRLCLEEGADWVPYLAGAAAVGGYGDVISPATDAPLALGDV LMLDTGLIWDGYFCDFDRNFSLGPPDAQVADGHAALIAATQAGHAVAKPGARICDLFHAMNDIVSPGSAASDAGRLGHGL GMQLTEWPSIIAADTTVLEEGMVLTLEPGITLPSGKILVHEENIVIEGQGARYLSRPQPPEIRVI >Mature_384_residues TPDRGFPDTEFQARTARAQSMMEQAGLGALLLTTEPEVRYYTGFLTRFWESPTRPWFVVIPASGAPIAVIPSIGAHLMGQ TWITDIRTWAAPDYDDDGVGLLAETLCEITPADAHVGLADQMESHLRMPLSSLRRLEHSIGPRRITGDATITRRLRLVKS PLELAKITHAVQIADRAFDRVPEVARTGISLSQVFRDFQRLCLEEGADWVPYLAGAAAVGGYGDVISPATDAPLALGDVL MLDTGLIWDGYFCDFDRNFSLGPPDAQVADGHAALIAATQAGHAVAKPGARICDLFHAMNDIVSPGSAASDAGRLGHGLG MQLTEWPSIIAADTTVLEEGMVLTLEPGITLPSGKILVHEENIVIEGQGARYLSRPQPPEIRVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Escherichia coli, GI1788728, Length=228, Percent_Identity=27.6315789473684, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000587 - InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR001131 [H]
Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]
EC number: 3.4.-.- [C]
Molecular weight: Translated: 41534; Mature: 41403
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDRGFPDTEFQARTARAQSMMEQAGLGALLLTTEPEVRYYTGFLTRFWESPTRPWFVV CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEE IPASGAPIAVIPSIGAHLMGQTWITDIRTWAAPDYDDDGVGLLAETLCEITPADAHVGLA EECCCCCEEEECCHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHH DQMESHLRMPLSSLRRLEHSIGPRRITGDATITRRLRLVKSPLELAKITHAVQIADRAFD HHHHHHHHCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVPEVARTGISLSQVFRDFQRLCLEEGADWVPYLAGAAAVGGYGDVISPATDAPLALGDV HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH LMLDTGLIWDGYFCDFDRNFSLGPPDAQVADGHAALIAATQAGHAVAKPGARICDLFHAM HEEECCCEECCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCHHHHHHHHHH NDIVSPGSAASDAGRLGHGLGMQLTEWPSIIAADTTVLEEGMVLTLEPGITLPSGKILVH HHHCCCCCCCCHHHHHCCCCCCCHHHCCCHHCCCHHHHHCCEEEEECCCCCCCCCEEEEE EENIVIEGQGARYLSRPQPPEIRVI ECCEEEECCCCHHCCCCCCCCEEEC >Mature Secondary Structure TPDRGFPDTEFQARTARAQSMMEQAGLGALLLTTEPEVRYYTGFLTRFWESPTRPWFVV CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEE IPASGAPIAVIPSIGAHLMGQTWITDIRTWAAPDYDDDGVGLLAETLCEITPADAHVGLA EECCCCCEEEECCHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHH DQMESHLRMPLSSLRRLEHSIGPRRITGDATITRRLRLVKSPLELAKITHAVQIADRAFD HHHHHHHHCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVPEVARTGISLSQVFRDFQRLCLEEGADWVPYLAGAAAVGGYGDVISPATDAPLALGDV HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH LMLDTGLIWDGYFCDFDRNFSLGPPDAQVADGHAALIAATQAGHAVAKPGARICDLFHAM HEEECCCEECCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCHHHHHHHHHH NDIVSPGSAASDAGRLGHGLGMQLTEWPSIIAADTTVLEEGMVLTLEPGITLPSGKILVH HHHCCCCCCCCHHHHHCCCCCCCHHHCCCHHCCCHHHHHCCEEEEECCCCCCCCCEEEEE EENIVIEGQGARYLSRPQPPEIRVI ECCEEEECCCCHHCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]