| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054321
Identifier: 89054321
GI number: 89054321
Start: 1816772
End: 1817512
Strand: Direct
Name: 89054321
Synonym: Jann_1830
Alternate gene names: NA
Gene position: 1816772-1817512 (Clockwise)
Preceding gene: 89054320
Following gene: 89054324
Centisome position: 42.07
GC content: 66.26
Gene sequence:
>741_bases ATGAAGAGCTTGCCCTACACCTTGTCGACGCATCGCCCGTCCCAGCTTGGCATGATCGTGCTGCAATCCGATGAGACGGT GGAGATGGATCTGCGGCATCTTTTGCCGACGGAGGCAGAGCTTCTGGTGACCCGTATCCCGTCCTCCCCCACCGTCTCAT CGGACGGCCTGGGCCAGATGGAGCGGGATGTGACGGGTGCGGCAAGCCTGTTGCCACGGGGTGCGCGGCTGTCCGTCGTC GGGTTCGGCTGCACCTCGGGCACGGCGCAGATCGGGGCGGCGCGGATCGCGGACCTGACCCGCAAGGGGGTTGAGACGGC TGCCGTGACCAATCCCGTCTCCGCCCTCATCGCCGCTTGCGCGCATCTGGGCGTCACGCGTCTGGCACTGGTCAGCCCAT ACGTTGAAGAGGTCTCACACCGCCTGATGGAGGTTTTGGCGGAGGCGGGCATCACCATCGCCGCCTTCGCGAGCTTCAAT GAGGCCCGGGAGGACCGCGTTGTGCGCATCGCGCCGCAGGCGATTGTGGATGCGGCTCGGGCAACGGCGGAGGACGCGCC GTGTGATGCGGTCTTCCTGTCCTGCACCAACATGCGCACGTTGGATGTGATCGCCCCTATCGAGGCCGAATTGGGCCTGC CAGTCCTGTCCAGCAATCTGGTGTTGGCCTGGCATATGGCGCGTCTGGCGGGCGTGAGCGGGCCTTTGGGCATTGATGCC GCGCTGACCCGGGCGCGCTAG
Upstream 100 bases:
>100_bases TGCCGTCGGGCAAGATCCTGGTCCATGAAGAGAATATCGTCATCGAAGGGCAGGGCGCGCGGTATCTGTCGCGGCCTCAA CCCCCGGAGATCCGTGTCAT
Downstream 100 bases:
>100_bases CCAATGAATTGCAGCCGCGCGAGACGGCCCTGAGGGCTGCGCGCGGCGACCAGTGCATTCTGGATGCCGGTGGCCACGAT CTCTCCCTCATCCATTCCGA
Product: Asp/Glu racemase
Products: NA
Alternate protein names: Asp/Glu/Hydantoin Racemase; Arylmalonate Decarboxylase; Asp/Glu/Hydantoin Racemase Family Protein; Decarboxylase; Ectoine Utilization Protein EutA; Maleate Cis-Trans Isomerase; Arylmalonate Decarboxylase Protein; Asp/Glu/Hydantoin Racemase Superfamily; Racemase; Isomerase; Pyridoxal-5-Phosphate-Dependent Beta Subunit
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MKSLPYTLSTHRPSQLGMIVLQSDETVEMDLRHLLPTEAELLVTRIPSSPTVSSDGLGQMERDVTGAASLLPRGARLSVV GFGCTSGTAQIGAARIADLTRKGVETAAVTNPVSALIAACAHLGVTRLALVSPYVEEVSHRLMEVLAEAGITIAAFASFN EAREDRVVRIAPQAIVDAARATAEDAPCDAVFLSCTNMRTLDVIAPIEAELGLPVLSSNLVLAWHMARLAGVSGPLGIDA ALTRAR
Sequences:
>Translated_246_residues MKSLPYTLSTHRPSQLGMIVLQSDETVEMDLRHLLPTEAELLVTRIPSSPTVSSDGLGQMERDVTGAASLLPRGARLSVV GFGCTSGTAQIGAARIADLTRKGVETAAVTNPVSALIAACAHLGVTRLALVSPYVEEVSHRLMEVLAEAGITIAAFASFN EAREDRVVRIAPQAIVDAARATAEDAPCDAVFLSCTNMRTLDVIAPIEAELGLPVLSSNLVLAWHMARLAGVSGPLGIDA ALTRAR >Mature_246_residues MKSLPYTLSTHRPSQLGMIVLQSDETVEMDLRHLLPTEAELLVTRIPSSPTVSSDGLGQMERDVTGAASLLPRGARLSVV GFGCTSGTAQIGAARIADLTRKGVETAAVTNPVSALIAACAHLGVTRLALVSPYVEEVSHRLMEVLAEAGITIAAFASFN EAREDRVVRIAPQAIVDAARATAEDAPCDAVFLSCTNMRTLDVIAPIEAELGLPVLSSNLVLAWHMARLAGVSGPLGIDA ALTRAR
Specific function: Unknown
COG id: COG3473
COG function: function code Q; Maleate cis-trans isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25816; Mature: 25816
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLPYTLSTHRPSQLGMIVLQSDETVEMDLRHLLPTEAELLVTRIPSSPTVSSDGLGQM CCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCHHEEEEECCCCCCCCCCCCCHH ERDVTGAASLLPRGARLSVVGFGCTSGTAQIGAARIADLTRKGVETAAVTNPVSALIAAC HHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AHLGVTRLALVSPYVEEVSHRLMEVLAEAGITIAAFASFNEAREDRVVRIAPQAIVDAAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCEEEECHHHHHHHHH ATAEDAPCDAVFLSCTNMRTLDVIAPIEAELGLPVLSSNLVLAWHMARLAGVSGPLGIDA HCCCCCCCCEEEEEECCCEEEEEEECCHHHCCCEECCCCCHHHHHHHHHHCCCCCCCCHH ALTRAR HHHCCC >Mature Secondary Structure MKSLPYTLSTHRPSQLGMIVLQSDETVEMDLRHLLPTEAELLVTRIPSSPTVSSDGLGQM CCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCHHEEEEECCCCCCCCCCCCCHH ERDVTGAASLLPRGARLSVVGFGCTSGTAQIGAARIADLTRKGVETAAVTNPVSALIAAC HHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AHLGVTRLALVSPYVEEVSHRLMEVLAEAGITIAAFASFNEAREDRVVRIAPQAIVDAAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCEEEECHHHHHHHHH ATAEDAPCDAVFLSCTNMRTLDVIAPIEAELGLPVLSSNLVLAWHMARLAGVSGPLGIDA HCCCCCCCCEEEEEECCCEEEEEEECCHHHCCCEECCCCCHHHHHHHHHHCCCCCCCCHH ALTRAR HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA