Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054321

Identifier: 89054321

GI number: 89054321

Start: 1816772

End: 1817512

Strand: Direct

Name: 89054321

Synonym: Jann_1830

Alternate gene names: NA

Gene position: 1816772-1817512 (Clockwise)

Preceding gene: 89054320

Following gene: 89054324

Centisome position: 42.07

GC content: 66.26

Gene sequence:

>741_bases
ATGAAGAGCTTGCCCTACACCTTGTCGACGCATCGCCCGTCCCAGCTTGGCATGATCGTGCTGCAATCCGATGAGACGGT
GGAGATGGATCTGCGGCATCTTTTGCCGACGGAGGCAGAGCTTCTGGTGACCCGTATCCCGTCCTCCCCCACCGTCTCAT
CGGACGGCCTGGGCCAGATGGAGCGGGATGTGACGGGTGCGGCAAGCCTGTTGCCACGGGGTGCGCGGCTGTCCGTCGTC
GGGTTCGGCTGCACCTCGGGCACGGCGCAGATCGGGGCGGCGCGGATCGCGGACCTGACCCGCAAGGGGGTTGAGACGGC
TGCCGTGACCAATCCCGTCTCCGCCCTCATCGCCGCTTGCGCGCATCTGGGCGTCACGCGTCTGGCACTGGTCAGCCCAT
ACGTTGAAGAGGTCTCACACCGCCTGATGGAGGTTTTGGCGGAGGCGGGCATCACCATCGCCGCCTTCGCGAGCTTCAAT
GAGGCCCGGGAGGACCGCGTTGTGCGCATCGCGCCGCAGGCGATTGTGGATGCGGCTCGGGCAACGGCGGAGGACGCGCC
GTGTGATGCGGTCTTCCTGTCCTGCACCAACATGCGCACGTTGGATGTGATCGCCCCTATCGAGGCCGAATTGGGCCTGC
CAGTCCTGTCCAGCAATCTGGTGTTGGCCTGGCATATGGCGCGTCTGGCGGGCGTGAGCGGGCCTTTGGGCATTGATGCC
GCGCTGACCCGGGCGCGCTAG

Upstream 100 bases:

>100_bases
TGCCGTCGGGCAAGATCCTGGTCCATGAAGAGAATATCGTCATCGAAGGGCAGGGCGCGCGGTATCTGTCGCGGCCTCAA
CCCCCGGAGATCCGTGTCAT

Downstream 100 bases:

>100_bases
CCAATGAATTGCAGCCGCGCGAGACGGCCCTGAGGGCTGCGCGCGGCGACCAGTGCATTCTGGATGCCGGTGGCCACGAT
CTCTCCCTCATCCATTCCGA

Product: Asp/Glu racemase

Products: NA

Alternate protein names: Asp/Glu/Hydantoin Racemase; Arylmalonate Decarboxylase; Asp/Glu/Hydantoin Racemase Family Protein; Decarboxylase; Ectoine Utilization Protein EutA; Maleate Cis-Trans Isomerase; Arylmalonate Decarboxylase Protein; Asp/Glu/Hydantoin Racemase Superfamily; Racemase; Isomerase; Pyridoxal-5-Phosphate-Dependent Beta Subunit

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKSLPYTLSTHRPSQLGMIVLQSDETVEMDLRHLLPTEAELLVTRIPSSPTVSSDGLGQMERDVTGAASLLPRGARLSVV
GFGCTSGTAQIGAARIADLTRKGVETAAVTNPVSALIAACAHLGVTRLALVSPYVEEVSHRLMEVLAEAGITIAAFASFN
EAREDRVVRIAPQAIVDAARATAEDAPCDAVFLSCTNMRTLDVIAPIEAELGLPVLSSNLVLAWHMARLAGVSGPLGIDA
ALTRAR

Sequences:

>Translated_246_residues
MKSLPYTLSTHRPSQLGMIVLQSDETVEMDLRHLLPTEAELLVTRIPSSPTVSSDGLGQMERDVTGAASLLPRGARLSVV
GFGCTSGTAQIGAARIADLTRKGVETAAVTNPVSALIAACAHLGVTRLALVSPYVEEVSHRLMEVLAEAGITIAAFASFN
EAREDRVVRIAPQAIVDAARATAEDAPCDAVFLSCTNMRTLDVIAPIEAELGLPVLSSNLVLAWHMARLAGVSGPLGIDA
ALTRAR
>Mature_246_residues
MKSLPYTLSTHRPSQLGMIVLQSDETVEMDLRHLLPTEAELLVTRIPSSPTVSSDGLGQMERDVTGAASLLPRGARLSVV
GFGCTSGTAQIGAARIADLTRKGVETAAVTNPVSALIAACAHLGVTRLALVSPYVEEVSHRLMEVLAEAGITIAAFASFN
EAREDRVVRIAPQAIVDAARATAEDAPCDAVFLSCTNMRTLDVIAPIEAELGLPVLSSNLVLAWHMARLAGVSGPLGIDA
ALTRAR

Specific function: Unknown

COG id: COG3473

COG function: function code Q; Maleate cis-trans isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25816; Mature: 25816

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLPYTLSTHRPSQLGMIVLQSDETVEMDLRHLLPTEAELLVTRIPSSPTVSSDGLGQM
CCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCHHEEEEECCCCCCCCCCCCCHH
ERDVTGAASLLPRGARLSVVGFGCTSGTAQIGAARIADLTRKGVETAAVTNPVSALIAAC
HHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AHLGVTRLALVSPYVEEVSHRLMEVLAEAGITIAAFASFNEAREDRVVRIAPQAIVDAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCEEEECHHHHHHHHH
ATAEDAPCDAVFLSCTNMRTLDVIAPIEAELGLPVLSSNLVLAWHMARLAGVSGPLGIDA
HCCCCCCCCEEEEEECCCEEEEEEECCHHHCCCEECCCCCHHHHHHHHHHCCCCCCCCHH
ALTRAR
HHHCCC
>Mature Secondary Structure
MKSLPYTLSTHRPSQLGMIVLQSDETVEMDLRHLLPTEAELLVTRIPSSPTVSSDGLGQM
CCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCHHEEEEECCCCCCCCCCCCCHH
ERDVTGAASLLPRGARLSVVGFGCTSGTAQIGAARIADLTRKGVETAAVTNPVSALIAAC
HHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AHLGVTRLALVSPYVEEVSHRLMEVLAEAGITIAAFASFNEAREDRVVRIAPQAIVDAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCEEEECHHHHHHHHH
ATAEDAPCDAVFLSCTNMRTLDVIAPIEAELGLPVLSSNLVLAWHMARLAGVSGPLGIDA
HCCCCCCCCEEEEEECCCEEEEEEECCHHHCCCEECCCCCHHHHHHHHHHCCCCCCCCHH
ALTRAR
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA