| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054317
Identifier: 89054317
GI number: 89054317
Start: 1813636
End: 1814142
Strand: Direct
Name: 89054317
Synonym: Jann_1826
Alternate gene names: NA
Gene position: 1813636-1814142 (Clockwise)
Preceding gene: 89054313
Following gene: 89054318
Centisome position: 42.0
GC content: 59.96
Gene sequence:
>507_bases ATGTGTCGCTCAGGCCGGGGACAAAGGGAGGAGACGCCCCGACCAACGGCGACTGCTATCGTTGTGCCGGAGGAAGGCGG TGGCGGAAAGCGCGGGGCCGCACTCCTTGGGCCGCAAACCTGCGCTGCCACTATATTGGGCGATGTTTTCGGCGCGGTGG CTGTGGATCGGGCGCAGTTGGTCTTGCTTTGCGCGATCGGGGGATTCGCGGGTGATGTGCGTGGCGGGTCGGGTTGGGTG AATTGTTGCAAAAACCGGCCCGCTGATCACGGCGTAGAGATCGGTTGTCACGGGCCCGTGGGGTTGGTGCAGGGCGATCT GGGTAATGTGCGTATACGCACCAATATTACACGATTCTCTCGCGTACGTGTGTGGAATGAGGGCGCGTTAGCCTGCATAT TCATCTCATCGGAACGCAGACAAGCTAAAGCGCTCCACCAAGACACCCAAACCAAAGGGCCGCGAGACACGCCGCCCACA CATATCGAAAAAGGACTAACACCATGA
Upstream 100 bases:
>100_bases ATTGTGGCGAGACTGTGGCAGGACCCGCAGAATGTCGGAAAAGGAAAGCTGACGATTGGGAGCGGTGGAAGAGAGACGAG GTCCCAATCGCCAGCTTTAG
Downstream 100 bases:
>100_bases AAAAGATCGCAATCATCGCCGCCCTTGCCGCTTCTATCGCCGCTCCGGCCGTCGCACAATCCACCTCCACAGCCTTCGCC ATCGCGCATTTCAACATGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MCRSGRGQREETPRPTATAIVVPEEGGGGKRGAALLGPQTCAATILGDVFGAVAVDRAQLVLLCAIGGFAGDVRGGSGWV NCCKNRPADHGVEIGCHGPVGLVQGDLGNVRIRTNITRFSRVRVWNEGALACIFISSERRQAKALHQDTQTKGPRDTPPT HIEKGLTP
Sequences:
>Translated_168_residues MCRSGRGQREETPRPTATAIVVPEEGGGGKRGAALLGPQTCAATILGDVFGAVAVDRAQLVLLCAIGGFAGDVRGGSGWV NCCKNRPADHGVEIGCHGPVGLVQGDLGNVRIRTNITRFSRVRVWNEGALACIFISSERRQAKALHQDTQTKGPRDTPPT HIEKGLTP >Mature_168_residues MCRSGRGQREETPRPTATAIVVPEEGGGGKRGAALLGPQTCAATILGDVFGAVAVDRAQLVLLCAIGGFAGDVRGGSGWV NCCKNRPADHGVEIGCHGPVGLVQGDLGNVRIRTNITRFSRVRVWNEGALACIFISSERRQAKALHQDTQTKGPRDTPPT HIEKGLTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17661; Mature: 17661
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRSGRGQREETPRPTATAIVVPEEGGGGKRGAALLGPQTCAATILGDVFGAVAVDRAQL CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHE VLLCAIGGFAGDVRGGSGWVNCCKNRPADHGVEIGCHGPVGLVQGDLGNVRIRTNITRFS EEEEEECCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCEEECCCCCEEEEEECCEEE RVRVWNEGALACIFISSERRQAKALHQDTQTKGPRDTPPTHIEKGLTP EEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure MCRSGRGQREETPRPTATAIVVPEEGGGGKRGAALLGPQTCAATILGDVFGAVAVDRAQL CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHE VLLCAIGGFAGDVRGGSGWVNCCKNRPADHGVEIGCHGPVGLVQGDLGNVRIRTNITRFS EEEEEECCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCEEECCCCCEEEEEECCEEE RVRVWNEGALACIFISSERRQAKALHQDTQTKGPRDTPPTHIEKGLTP EEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA