| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054310
Identifier: 89054310
GI number: 89054310
Start: 1808593
End: 1809174
Strand: Direct
Name: 89054310
Synonym: Jann_1819
Alternate gene names: NA
Gene position: 1808593-1809174 (Clockwise)
Preceding gene: 89054307
Following gene: 89054313
Centisome position: 41.89
GC content: 60.48
Gene sequence:
>582_bases ATGTTTTCATTCATCCGAGCCTGCACGCTGCTTTTGGCATGCGGCGCGACGCCAGCAGCCGCCGTTCCGGTGGAATTTAC CTTCGACGGGCAATTTTCGACCCCGGGAAGCAACACACCAAGCGTGCCAGTCGGAGAGTTTTACACCCTCTCGGTCATCA TGGACAACGGCGGCACCGACCTGATCAGTCAGGATTGGGATCGCAATGATTTTGTGTCCGCACAGCTGACGGCAGGCGCG TATGTTGCGACATTTGCCGGTGCAAGTTCCCCGACCCAGTTCCACACAGATGCAACCGGGGCGCTGCTGAACCCGATCCG CTTCGCGTCCACTGATGCGGCTTTTGCGAACACGGACAACGCGGGCGGATCATTTTCGCCGCTGTTCTTCTTTGTGGCAC AAGTGACCACGTCAGAAGACTTCACCTTCAATCCGGCCGGAAATTCGTCAACCACGACGCTGTCGCGCTGGTCGGTGGAT TTGCTCGATCAACCGCCAGCGGTACCGCTGCCGGCGGCGGGCTGGATGTTGCTGGCCGGTCTCGGGGCGCTTTCCCTGCA CCGGCGACGGGCCTGCGCGTAA
Upstream 100 bases:
>100_bases GCATGGCGGCAATGCGCGCCCAAGGAAATCCGTACCCGACACCCGGGATGAAATACCGTATCAATGTCGCATTTGAGTCT GATTTATTATGGAGTTTCTG
Downstream 100 bases:
>100_bases CCGGCTTAGCGCGGCTGCGCACGGTCCAATGCATCGGCGGCCTTCTCCCACAGCGTTTCGGCGCGGGCGAGCCCATCCAT GACTTCGGCGTATTTCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MFSFIRACTLLLACGATPAAAVPVEFTFDGQFSTPGSNTPSVPVGEFYTLSVIMDNGGTDLISQDWDRNDFVSAQLTAGA YVATFAGASSPTQFHTDATGALLNPIRFASTDAAFANTDNAGGSFSPLFFFVAQVTTSEDFTFNPAGNSSTTTLSRWSVD LLDQPPAVPLPAAGWMLLAGLGALSLHRRRACA
Sequences:
>Translated_193_residues MFSFIRACTLLLACGATPAAAVPVEFTFDGQFSTPGSNTPSVPVGEFYTLSVIMDNGGTDLISQDWDRNDFVSAQLTAGA YVATFAGASSPTQFHTDATGALLNPIRFASTDAAFANTDNAGGSFSPLFFFVAQVTTSEDFTFNPAGNSSTTTLSRWSVD LLDQPPAVPLPAAGWMLLAGLGALSLHRRRACA >Mature_193_residues MFSFIRACTLLLACGATPAAAVPVEFTFDGQFSTPGSNTPSVPVGEFYTLSVIMDNGGTDLISQDWDRNDFVSAQLTAGA YVATFAGASSPTQFHTDATGALLNPIRFASTDAAFANTDNAGGSFSPLFFFVAQVTTSEDFTFNPAGNSSTTTLSRWSVD LLDQPPAVPLPAAGWMLLAGLGALSLHRRRACA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20204; Mature: 20204
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSFIRACTLLLACGATPAAAVPVEFTFDGQFSTPGSNTPSVPVGEFYTLSVIMDNGGTD CHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC LISQDWDRNDFVSAQLTAGAYVATFAGASSPTQFHTDATGALLNPIRFASTDAAFANTDN CCCCCCCCCCEEEEEECCCEEEEEECCCCCCCEEECCCCCHHHCCEEECCCCCCCCCCCC AGGSFSPLFFFVAQVTTSEDFTFNPAGNSSTTTLSRWSVDLLDQPPAVPLPAAGWMLLAG CCCCCCHHHHEEEHHCCCCCEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHH LGALSLHRRRACA HHHHHHHHHHCCC >Mature Secondary Structure MFSFIRACTLLLACGATPAAAVPVEFTFDGQFSTPGSNTPSVPVGEFYTLSVIMDNGGTD CHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC LISQDWDRNDFVSAQLTAGAYVATFAGASSPTQFHTDATGALLNPIRFASTDAAFANTDN CCCCCCCCCCEEEEEECCCEEEEEECCCCCCCEEECCCCCHHHCCEEECCCCCCCCCCCC AGGSFSPLFFFVAQVTTSEDFTFNPAGNSSTTTLSRWSVDLLDQPPAVPLPAAGWMLLAG CCCCCCHHHHEEEHHCCCCCEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHH LGALSLHRRRACA HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA