| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is pepA [H]
Identifier: 89054306
GI number: 89054306
Start: 1805295
End: 1806761
Strand: Direct
Name: pepA [H]
Synonym: Jann_1815
Alternate gene names: 89054306
Gene position: 1805295-1806761 (Clockwise)
Preceding gene: 89054299
Following gene: 89054307
Centisome position: 41.81
GC content: 64.35
Gene sequence:
>1467_bases ATGACCGACCTCATGTCCATAGACTTTGCTGAAACCGACCTCGACGCGCTGGCAGATGCGGCGGGCAAGCTGGCGATTCT CGTCACGCCCGAGGGCAAGCTGGATCCTGCCGGTCGGCGGGTAAACCGGCTGACAAAGCAGGCAGTGGCGCGGTTGGTGG AGTCGGATCGGTGGGAGAAGGTGAAGGCGGGCGACGGCTTTACCATGGGATTCCCTGCGGGCGTGGCAGCGGACGCCTTG CTGGTGGTGAAGCTGGAGCGGCGCCCCACCGTCACGGAGGCCCGCAAGGCGGGCGCATCGCTGGCCAAGTTCAAGGGCAA GGATGCGCTGACTGTTTGCGCGGGCGCATTCAACCGTACCGCTGACATCGCGTTGGGCCTGGCGCTCCGCGCCTACGGGT TCGACGCCCATCGCACCGGAGAGAAGACGGACGCGCAGGGCGCGATGATCTATTGCGCCAAGCCCGATGAGGTGAAGCCG GAGGCCGCAACTGCCATGGCCGTCGCCGAAGGTGTGTTCTTCACCCGCGATCTGATCAATGAGCCCGCCAACGTGCTGAC AACGCAGGAGTTTGCCGATCGGCTGGAGGCGATGAAAGATATCGGCCTGAAGGTTGAGGTGCTGGACGAGCCTGCGCTGG CAAAGCTGGGGATGCGCACGCTTCTGGCGGTGGGCGAAGGCTCCGAAAGCCCGTCTAAGGTTGTCGTGATGTCGTGGAAT GGCGGCGGCGATGAAAAGCCTCTGGCGCTGATCGGCAAGGGGGTTGTGTTCGATACGGGCGGCATCAGCCTGAAGCCCGC AGGCGGCATGGAAGACATGACGATGGATATGGGCGGCGCGGGTGTCGTGTCGGGCGTCATGCGGACGCTGGCCCTGCGCA AGGCCAAGGCGAACGTCGTGGGCGTTGTGGGCCTGGTGGAGAACATGCCAGACGGGCGTGCCACGCGGCCCGGCGATGTC GTCCGCTCCATGAAAGGCGACACGGTGGAGATCATCAACACCGATGCGGAGGGGCGTTTGGTCTTGTGCGATATCATGTG GTACGCGCAGGAGCGGTTCGAGCCGTCTGGGATGATTGATCTTGCCACGCTGACCGGGGCGATCATCATCGGGTTGGGCC ATGAGAATGCCGGCGTCTTCTCCAATTCTGACCCGTTGTCCGGTGCCTTCCTGAAGGCGGCCGACGCGGAGGGTGAGGGG GCATGGCGGATGCCTCTGGGGGACGCCTACGACAAGATGCTGAAATCGCGCGTGGCCGATATGGCGAACGTCGGTGGTCG GGCCGCAGGCTCCATCACAGCCGCGCAGTTCCTGCAACGGTTCGTGAAGGAGGAGACGCCTTGGATCCACCTCGATATTG CAGGCGTGGCGAGCGTGAAGTCCGAGACCGCGCTGGCACCCAAGGGCGCGACGGGCTGGGGCGTGATGGCTTTGGACAGG CTTGTCCGCGATAGCTATGAAGGCTGA
Upstream 100 bases:
>100_bases GCGTTTTCAGCCCTTGCGTAGGGGCGATCTGGCCAAGCGGGGAACACCGCCCTAAGGTCTGGCGCGAATGTCACGCTTTT CGCCCATAAGGGAGCCCTTG
Downstream 100 bases:
>100_bases TCTATCACATGAAGAGCGGCGCGTAAGCTATGGGTGAGGCGTACTTTTATCACCTCACCCAAGCGCCGCTGGAGGTCACG CTGCGCGTGCTGTTGGGCAA
Product: leucyl aminopeptidase
Products: NA
Alternate protein names: Leucine aminopeptidase; LAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 488; Mature: 487
Protein sequence:
>488_residues MTDLMSIDFAETDLDALADAAGKLAILVTPEGKLDPAGRRVNRLTKQAVARLVESDRWEKVKAGDGFTMGFPAGVAADAL LVVKLERRPTVTEARKAGASLAKFKGKDALTVCAGAFNRTADIALGLALRAYGFDAHRTGEKTDAQGAMIYCAKPDEVKP EAATAMAVAEGVFFTRDLINEPANVLTTQEFADRLEAMKDIGLKVEVLDEPALAKLGMRTLLAVGEGSESPSKVVVMSWN GGGDEKPLALIGKGVVFDTGGISLKPAGGMEDMTMDMGGAGVVSGVMRTLALRKAKANVVGVVGLVENMPDGRATRPGDV VRSMKGDTVEIINTDAEGRLVLCDIMWYAQERFEPSGMIDLATLTGAIIIGLGHENAGVFSNSDPLSGAFLKAADAEGEG AWRMPLGDAYDKMLKSRVADMANVGGRAAGSITAAQFLQRFVKEETPWIHLDIAGVASVKSETALAPKGATGWGVMALDR LVRDSYEG
Sequences:
>Translated_488_residues MTDLMSIDFAETDLDALADAAGKLAILVTPEGKLDPAGRRVNRLTKQAVARLVESDRWEKVKAGDGFTMGFPAGVAADAL LVVKLERRPTVTEARKAGASLAKFKGKDALTVCAGAFNRTADIALGLALRAYGFDAHRTGEKTDAQGAMIYCAKPDEVKP EAATAMAVAEGVFFTRDLINEPANVLTTQEFADRLEAMKDIGLKVEVLDEPALAKLGMRTLLAVGEGSESPSKVVVMSWN GGGDEKPLALIGKGVVFDTGGISLKPAGGMEDMTMDMGGAGVVSGVMRTLALRKAKANVVGVVGLVENMPDGRATRPGDV VRSMKGDTVEIINTDAEGRLVLCDIMWYAQERFEPSGMIDLATLTGAIIIGLGHENAGVFSNSDPLSGAFLKAADAEGEG AWRMPLGDAYDKMLKSRVADMANVGGRAAGSITAAQFLQRFVKEETPWIHLDIAGVASVKSETALAPKGATGWGVMALDR LVRDSYEG >Mature_487_residues TDLMSIDFAETDLDALADAAGKLAILVTPEGKLDPAGRRVNRLTKQAVARLVESDRWEKVKAGDGFTMGFPAGVAADALL VVKLERRPTVTEARKAGASLAKFKGKDALTVCAGAFNRTADIALGLALRAYGFDAHRTGEKTDAQGAMIYCAKPDEVKPE AATAMAVAEGVFFTRDLINEPANVLTTQEFADRLEAMKDIGLKVEVLDEPALAKLGMRTLLAVGEGSESPSKVVVMSWNG GGDEKPLALIGKGVVFDTGGISLKPAGGMEDMTMDMGGAGVVSGVMRTLALRKAKANVVGVVGLVENMPDGRATRPGDVV RSMKGDTVEIINTDAEGRLVLCDIMWYAQERFEPSGMIDLATLTGAIIIGLGHENAGVFSNSDPLSGAFLKAADAEGEGA WRMPLGDAYDKMLKSRVADMANVGGRAAGSITAAQFLQRFVKEETPWIHLDIAGVASVKSETALAPKGATGWGVMALDRL VRDSYEG
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides [H]
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family [H]
Homologues:
Organism=Homo sapiens, GI41393561, Length=311, Percent_Identity=40.1929260450161, Blast_Score=219, Evalue=6e-57, Organism=Homo sapiens, GI47155554, Length=364, Percent_Identity=32.4175824175824, Blast_Score=141, Evalue=2e-33, Organism=Escherichia coli, GI1790710, Length=311, Percent_Identity=47.2668810289389, Blast_Score=281, Evalue=5e-77, Organism=Escherichia coli, GI87082123, Length=319, Percent_Identity=35.423197492163, Blast_Score=166, Evalue=4e-42, Organism=Caenorhabditis elegans, GI17556903, Length=301, Percent_Identity=36.5448504983389, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI17565172, Length=182, Percent_Identity=30.2197802197802, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI21355725, Length=287, Percent_Identity=36.2369337979094, Blast_Score=166, Evalue=3e-41, Organism=Drosophila melanogaster, GI24661038, Length=287, Percent_Identity=36.2369337979094, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI20129969, Length=302, Percent_Identity=31.7880794701987, Blast_Score=158, Evalue=7e-39, Organism=Drosophila melanogaster, GI24662227, Length=333, Percent_Identity=30.03003003003, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI161077148, Length=290, Percent_Identity=32.4137931034483, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI20130057, Length=290, Percent_Identity=32.4137931034483, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI19922386, Length=290, Percent_Identity=33.448275862069, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI20129963, Length=300, Percent_Identity=32.3333333333333, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI21355645, Length=290, Percent_Identity=30, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI24662223, Length=290, Percent_Identity=30, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI221379063, Length=313, Percent_Identity=31.629392971246, Blast_Score=135, Evalue=7e-32, Organism=Drosophila melanogaster, GI221379062, Length=313, Percent_Identity=31.629392971246, Blast_Score=135, Evalue=7e-32, Organism=Drosophila melanogaster, GI21357381, Length=313, Percent_Identity=31.629392971246, Blast_Score=135, Evalue=8e-32, Organism=Drosophila melanogaster, GI24646701, Length=144, Percent_Identity=34.7222222222222, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24646703, Length=144, Percent_Identity=34.7222222222222, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21358201, Length=144, Percent_Identity=34.7222222222222, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 [H]
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N [H]
EC number: =3.4.11.1; =3.4.11.10 [H]
Molecular weight: Translated: 51379; Mature: 51247
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00631 CYTOSOL_AP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLMSIDFAETDLDALADAAGKLAILVTPEGKLDPAGRRVNRLTKQAVARLVESDRWEK CCCCEECCCCCCCHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCE VKAGDGFTMGFPAGVAADALLVVKLERRPTVTEARKAGASLAKFKGKDALTVCAGAFNRT EECCCCEEECCCCCHHHCEEEEEEECCCCCHHHHHHCCCHHHHHCCCCCEEEEHHCCCCH ADIALGLALRAYGFDAHRTGEKTDAQGAMIYCAKPDEVKPEAATAMAVAEGVFFTRDLIN HHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHC EPANVLTTQEFADRLEAMKDIGLKVEVLDEPALAKLGMRTLLAVGEGSESPSKVVVMSWN CCHHHEEHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHEEECCCCCCCCEEEEEEEC GGGDEKPLALIGKGVVFDTGGISLKPAGGMEDMTMDMGGAGVVSGVMRTLALRKAKANVV CCCCCCCEEEEECCEEEECCCEEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCEE GVVGLVENMPDGRATRPGDVVRSMKGDTVEIINTDAEGRLVLCDIMWYAQERFEPSGMID EEEHHHHCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHCCCCCCEE LATLTGAIIIGLGHENAGVFSNSDPLSGAFLKAADAEGEGAWRMPLGDAYDKMLKSRVAD HHEECCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHH MANVGGRAAGSITAAQFLQRFVKEETPWIHLDIAGVASVKSETALAPKGATGWGVMALDR HHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCCCCCCCCCHHHHHHH LVRDSYEG HHHHCCCC >Mature Secondary Structure TDLMSIDFAETDLDALADAAGKLAILVTPEGKLDPAGRRVNRLTKQAVARLVESDRWEK CCCEECCCCCCCHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCE VKAGDGFTMGFPAGVAADALLVVKLERRPTVTEARKAGASLAKFKGKDALTVCAGAFNRT EECCCCEEECCCCCHHHCEEEEEEECCCCCHHHHHHCCCHHHHHCCCCCEEEEHHCCCCH ADIALGLALRAYGFDAHRTGEKTDAQGAMIYCAKPDEVKPEAATAMAVAEGVFFTRDLIN HHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHC EPANVLTTQEFADRLEAMKDIGLKVEVLDEPALAKLGMRTLLAVGEGSESPSKVVVMSWN CCHHHEEHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHEEECCCCCCCCEEEEEEEC GGGDEKPLALIGKGVVFDTGGISLKPAGGMEDMTMDMGGAGVVSGVMRTLALRKAKANVV CCCCCCCEEEEECCEEEECCCEEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCEE GVVGLVENMPDGRATRPGDVVRSMKGDTVEIINTDAEGRLVLCDIMWYAQERFEPSGMID EEEHHHHCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHCCCCCCEE LATLTGAIIIGLGHENAGVFSNSDPLSGAFLKAADAEGEGAWRMPLGDAYDKMLKSRVAD HHEECCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHH MANVGGRAAGSITAAQFLQRFVKEETPWIHLDIAGVASVKSETALAPKGATGWGVMALDR HHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCCCCCCCCCHHHHHHH LVRDSYEG HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA