Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054299

Identifier: 89054299

GI number: 89054299

Start: 1796757

End: 1797431

Strand: Direct

Name: 89054299

Synonym: Jann_1808

Alternate gene names: NA

Gene position: 1796757-1797431 (Clockwise)

Preceding gene: 89054298

Following gene: 89054306

Centisome position: 41.61

GC content: 65.78

Gene sequence:

>675_bases
ATGAGATCTTCGAAGAACCGCTCGCGGTCCAAAGGGAACCGCAATCGCAATGGCTCTATGGGAAATATCGTCAATCGGGT
CTTTGACTCGTCTGGCCCCGAGGGCAAGGTGCGCGGCACGCCACAGCAGATTGTGGACAAATACAATCAACTGACCCGCG
ACGCGCAGCTCTCCAACGACCGCGTGGCCGCCGAGAGCTTTCAGCAGCACGCCGAGCATTACACGCGGATGCTGGCGCAA
GCCCTGCGCGAGCAAGAGGCCAAGCAGGCACAACATCAGGCCAACCAGCAAAACAACCAGGGCGGTGGACAGCAAGGTGG
CAACCAACAAGGCGGCAACCAGCAGGGCGGAGGCGACCAGCAGGGTGGCGGCAACCAGGGTGGCGGCAATCGCCGCAACC
GGGGCGGTGGTGGCGGTGGCGGAGGCGGACAAGATCCGCAGCAGACCGAGCAGCCCCGGGTTGAGGCCGAGGCGCAGGGC
TCTTTCGATGCGGTGATTGATCCCACCGACGGGGATAGCGGCCTGGTCGAGACGCCTGAAAGCAGCCCGAAGCCCAAGCG
CGCCCGCACGCGCCGCCGCAAGGCCGATGCGCCCAAGGACGCGCCTGCCGGTGAGGCGGGCGAGGGCGGTGACAGCGGTG
GTGGTGACAAACCGCCGCAAGAGGCCGCTGAATAG

Upstream 100 bases:

>100_bases
GTGCTGGGTTCCAGCGCAGACCACGCGCAGACTGAGATTTTCCGGGCCCCGCCAAAGTTGCGATGTGGCCGCCAACCAGG
ACCACTGGATTAGTACACAC

Downstream 100 bases:

>100_bases
CGCTAATCGCAACGAAACAGGGGCCCGCACGTGGCCCCTTTTTTATGCCTCGCGCCCGTGGCTTGGCGTGATGACATCCT
CCATGACGCGGGCGAGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MRSSKNRSRSKGNRNRNGSMGNIVNRVFDSSGPEGKVRGTPQQIVDKYNQLTRDAQLSNDRVAAESFQQHAEHYTRMLAQ
ALREQEAKQAQHQANQQNNQGGGQQGGNQQGGNQQGGGDQQGGGNQGGGNRRNRGGGGGGGGGQDPQQTEQPRVEAEAQG
SFDAVIDPTDGDSGLVETPESSPKPKRARTRRRKADAPKDAPAGEAGEGGDSGGGDKPPQEAAE

Sequences:

>Translated_224_residues
MRSSKNRSRSKGNRNRNGSMGNIVNRVFDSSGPEGKVRGTPQQIVDKYNQLTRDAQLSNDRVAAESFQQHAEHYTRMLAQ
ALREQEAKQAQHQANQQNNQGGGQQGGNQQGGNQQGGGDQQGGGNQGGGNRRNRGGGGGGGGGQDPQQTEQPRVEAEAQG
SFDAVIDPTDGDSGLVETPESSPKPKRARTRRRKADAPKDAPAGEAGEGGDSGGGDKPPQEAAE
>Mature_224_residues
MRSSKNRSRSKGNRNRNGSMGNIVNRVFDSSGPEGKVRGTPQQIVDKYNQLTRDAQLSNDRVAAESFQQHAEHYTRMLAQ
ALREQEAKQAQHQANQQNNQGGGQQGGNQQGGNQQGGGDQQGGGNQGGGNRRNRGGGGGGGGGQDPQQTEQPRVEAEAQG
SFDAVIDPTDGDSGLVETPESSPKPKRARTRRRKADAPKDAPAGEAGEGGDSGGGDKPPQEAAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23508; Mature: 23508

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSKNRSRSKGNRNRNGSMGNIVNRVFDSSGPEGKVRGTPQQIVDKYNQLTRDAQLSND
CCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
RVAAESFQQHAEHYTRMLAQALREQEAKQAQHQANQQNNQGGGQQGGNQQGGNQQGGGDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
QGGGNQGGGNRRNRGGGGGGGGGQDPQQTEQPRVEAEAQGSFDAVIDPTDGDSGLVETPE
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCEEECCCCCCCCCCCCCC
SSPKPKRARTRRRKADAPKDAPAGEAGEGGDSGGGDKPPQEAAE
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
>Mature Secondary Structure
MRSSKNRSRSKGNRNRNGSMGNIVNRVFDSSGPEGKVRGTPQQIVDKYNQLTRDAQLSND
CCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
RVAAESFQQHAEHYTRMLAQALREQEAKQAQHQANQQNNQGGGQQGGNQQGGNQQGGGDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
QGGGNQGGGNRRNRGGGGGGGGGQDPQQTEQPRVEAEAQGSFDAVIDPTDGDSGLVETPE
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCEEECCCCCCCCCCCCCC
SSPKPKRARTRRRKADAPKDAPAGEAGEGGDSGGGDKPPQEAAE
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA