| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is cutL [H]
Identifier: 89054256
GI number: 89054256
Start: 1753020
End: 1755386
Strand: Direct
Name: cutL [H]
Synonym: Jann_1765
Alternate gene names: 89054256
Gene position: 1753020-1755386 (Clockwise)
Preceding gene: 89054255
Following gene: 89054257
Centisome position: 40.6
GC content: 62.99
Gene sequence:
>2367_bases ATGCCAAAGGATTCAGGCATTGGAGCCAGCTCAAAACGGCGCGAGGACGTGCGGTTTCTGACCGGGCAGGGGCGCTATAC GGATGATATCAACCTGCATGGGCAGGCCTATGTGCACTTCCTGCGCTCGGACGTGGCGCACGGCGTGCTGAACGGCGTTG ATACGTCGGCTGCCGCCGCGATGCCCGGCGTGGTGAAGATCTTCACCGGCGCGGATTTTGAAGGCGTGGGCGGGGTGCCC TGCGGCTGGCAGGTGACCGACAAACACGGTGAGCCGATGCAGGAGCCGGCGCACCCGGTGCTGGCTCAGGGCAAGGTCCG CTATGTGGGCGACGCGATTGCGGCTGTTGTGGCCGACACCGCCGAGCAGGCGCGCAACGCGGCCGAGGCGATTGTGCTGG ATATTGAGGAACTCCCTGCGGTCGTGGACATGAAAGCGGCGGTCGCGGACGGCGCCACAAAGGTCCATGACGATCTGACG TCAAACCTTTGTTATGACTGGGGATTTGTGGAGGAAAACAAGCCCCAGGTCGAAGCGGCGTTTGAGGCCGCAGCCCATGT GACGAGCCTTGAGTTGGTGAATAACCGTCTGAGCCCCAACCCGATGGAGCCGCGCGTTGCGGTCGGTGATTACAACGCCG GGACCGATGACAGCACGCTTTACACGACATCCCAGAACCCCCACGTGATCCGCCTTTTGATGGGCGCGTTCGTTCTGGGC ATTCCCGAGCATAAGCTGCGCGTGGTGGCCCCGGATGTGGGCGGGGGGTTTGGGTCGAAGATTTTCCACTACGTCGAAGA GGCGTTCTGCACCCTCGCGGCCAAGCAATGCCGCAGGCCGGTGAAGTGGACATCGTCCCGATCTGAGGCGTTCATCACCG ATGCCCATGGCCGCGACCACGTCACCAAGATCGAGCTGGCGCTGGATGCGGACAACAATTTCACCGGCATCCGGACGGAG ACATATGCCAACATGGGCGCGTATCTGTCCACCTTCGCGCCGTCGATCCCCACATGGCTGCACGGCACCTTGATGGCGGG CAACTACAAGACGCCCAACATCTACGTGAACGTCAAGGCGGTGTTCACCAACACGGTGCCCGTGGATGCGTATCGGGGCG CGGGCCGCCCGGAGGCGACCTATCAGCTGGAGCGGGTGATCGACAAAGCCGCGCGGGAATTGGGCGTCGACCCGATTGCG CTGCGGCGGCAGAACTTCATCACCGAATTCCCCTATGCCACCCCTGTGGCGGTGGAATATGACACTGGCGATTATGAAGG CACGATGACGAAGCTGTTGGAGATGATCGACCGCGACGGGTTTGAGGCGCGGCGTGCGGCATCCGAGGCCAACGGCAAGC TGCGCGGCCTTGGGGTGAACTGCTATATCGAGGCCTGCGGCATCGCACCGTCGGCTTTGGTGGGGCAGTTGGGCGCGCGC GCGGGTCTGTACGAGAGTGCAACCGTGCGGGTGAATGCCACGGGCGGTCTGGTTGTGATGACCGGCTCGCACAGCCACGG GCAGGGGCATGAGACGTCGTTTGCGCAGGTCGTGGCCGATATGATCGGCCTGCCCGAGGATCAGGTGGAAATTGTCCATG GTGACACGGCCAACACGCCGATGGGGATGGGCACCTATGGGTCCCGGTCCATCGCGGTCGGCGGCTCTGCCATGGTGCGC GCGACGGAAAAGATCATCGCCAAGGCCAAGAAAATCGCCGCCCATCTGATGGAGGCCGGTGAGGGCGATATCGAGTTGAA GGACGGGGCGTTCAGCGTCGCGGGCACAGACAAATCCGTGGCCTGGGGCGATGTGACGCTTGCCGCTTACGTGCCCCACA ATTACCCGCTGGAGGACATCGAGCCCGGCCTGGAAGAGACCGCGTTCTATGATCCCAACAACTTCACCTACCCCTCCGGC GCCTATGCCTGTGAGGTCGAAGTGGATCCTGACACCGGCAAAGTCGAGGTCATGTCCTTCGCGGCGGCGGATGATTTCGG CAATGTGATCAACCCGATGATCGTGGAGGGGCAGGTCCATGGTGGCATCGCGCAGGGCATCGGTCAGGCGCTGTTGGAGA ATGTCAGCTATGACGAAAACGGCCAACTGCTGAGCGCGTCCTACATGGATTACACCATGCCGCGGGCCGATGATGTGCCG ATGTTCCAGGTGGATCATTCCAGCCAGACGCCCTGCACGCACAACCCGTTGGGGGTGAAGGGCTGCGGCGAGGCGGGGGC GATTGGCTCACCGCCATCGGTGGTGAATGCGGTCGTGGATGCGCTGCAACGCGGCGGCCACACGAGCGTCACCCATATTG ATATGCCGCTGACGCCGTCGCGCGTCTGGTCGGCGATGCAAGGCTGA
Upstream 100 bases:
>100_bases TCCGGGTCCGATTGTAACCAAAAGGGGTTGGGAGGCCCCGTCGACCCGGACCGGCTCCCTATGGTGGTGAGCGGCGGGTG ACAAACAGGGAGGAATGACC
Downstream 100 bases:
>100_bases GAAAACAACCGGCGTCTGCGCGGGGCGTGGATGTCGGGATTGAGTTGTATTTGCCAAGATGAAGGAGCGCATGGCGCCCT GAGAGGAGACGGAATGTATA
Product: xanthine dehydrogenase, molybdenum binding subunit apoprotein
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 788; Mature: 787
Protein sequence:
>788_residues MPKDSGIGASSKRREDVRFLTGQGRYTDDINLHGQAYVHFLRSDVAHGVLNGVDTSAAAAMPGVVKIFTGADFEGVGGVP CGWQVTDKHGEPMQEPAHPVLAQGKVRYVGDAIAAVVADTAEQARNAAEAIVLDIEELPAVVDMKAAVADGATKVHDDLT SNLCYDWGFVEENKPQVEAAFEAAAHVTSLELVNNRLSPNPMEPRVAVGDYNAGTDDSTLYTTSQNPHVIRLLMGAFVLG IPEHKLRVVAPDVGGGFGSKIFHYVEEAFCTLAAKQCRRPVKWTSSRSEAFITDAHGRDHVTKIELALDADNNFTGIRTE TYANMGAYLSTFAPSIPTWLHGTLMAGNYKTPNIYVNVKAVFTNTVPVDAYRGAGRPEATYQLERVIDKAARELGVDPIA LRRQNFITEFPYATPVAVEYDTGDYEGTMTKLLEMIDRDGFEARRAASEANGKLRGLGVNCYIEACGIAPSALVGQLGAR AGLYESATVRVNATGGLVVMTGSHSHGQGHETSFAQVVADMIGLPEDQVEIVHGDTANTPMGMGTYGSRSIAVGGSAMVR ATEKIIAKAKKIAAHLMEAGEGDIELKDGAFSVAGTDKSVAWGDVTLAAYVPHNYPLEDIEPGLEETAFYDPNNFTYPSG AYACEVEVDPDTGKVEVMSFAAADDFGNVINPMIVEGQVHGGIAQGIGQALLENVSYDENGQLLSASYMDYTMPRADDVP MFQVDHSSQTPCTHNPLGVKGCGEAGAIGSPPSVVNAVVDALQRGGHTSVTHIDMPLTPSRVWSAMQG
Sequences:
>Translated_788_residues MPKDSGIGASSKRREDVRFLTGQGRYTDDINLHGQAYVHFLRSDVAHGVLNGVDTSAAAAMPGVVKIFTGADFEGVGGVP CGWQVTDKHGEPMQEPAHPVLAQGKVRYVGDAIAAVVADTAEQARNAAEAIVLDIEELPAVVDMKAAVADGATKVHDDLT SNLCYDWGFVEENKPQVEAAFEAAAHVTSLELVNNRLSPNPMEPRVAVGDYNAGTDDSTLYTTSQNPHVIRLLMGAFVLG IPEHKLRVVAPDVGGGFGSKIFHYVEEAFCTLAAKQCRRPVKWTSSRSEAFITDAHGRDHVTKIELALDADNNFTGIRTE TYANMGAYLSTFAPSIPTWLHGTLMAGNYKTPNIYVNVKAVFTNTVPVDAYRGAGRPEATYQLERVIDKAARELGVDPIA LRRQNFITEFPYATPVAVEYDTGDYEGTMTKLLEMIDRDGFEARRAASEANGKLRGLGVNCYIEACGIAPSALVGQLGAR AGLYESATVRVNATGGLVVMTGSHSHGQGHETSFAQVVADMIGLPEDQVEIVHGDTANTPMGMGTYGSRSIAVGGSAMVR ATEKIIAKAKKIAAHLMEAGEGDIELKDGAFSVAGTDKSVAWGDVTLAAYVPHNYPLEDIEPGLEETAFYDPNNFTYPSG AYACEVEVDPDTGKVEVMSFAAADDFGNVINPMIVEGQVHGGIAQGIGQALLENVSYDENGQLLSASYMDYTMPRADDVP MFQVDHSSQTPCTHNPLGVKGCGEAGAIGSPPSVVNAVVDALQRGGHTSVTHIDMPLTPSRVWSAMQG >Mature_787_residues PKDSGIGASSKRREDVRFLTGQGRYTDDINLHGQAYVHFLRSDVAHGVLNGVDTSAAAAMPGVVKIFTGADFEGVGGVPC GWQVTDKHGEPMQEPAHPVLAQGKVRYVGDAIAAVVADTAEQARNAAEAIVLDIEELPAVVDMKAAVADGATKVHDDLTS NLCYDWGFVEENKPQVEAAFEAAAHVTSLELVNNRLSPNPMEPRVAVGDYNAGTDDSTLYTTSQNPHVIRLLMGAFVLGI PEHKLRVVAPDVGGGFGSKIFHYVEEAFCTLAAKQCRRPVKWTSSRSEAFITDAHGRDHVTKIELALDADNNFTGIRTET YANMGAYLSTFAPSIPTWLHGTLMAGNYKTPNIYVNVKAVFTNTVPVDAYRGAGRPEATYQLERVIDKAARELGVDPIAL RRQNFITEFPYATPVAVEYDTGDYEGTMTKLLEMIDRDGFEARRAASEANGKLRGLGVNCYIEACGIAPSALVGQLGARA GLYESATVRVNATGGLVVMTGSHSHGQGHETSFAQVVADMIGLPEDQVEIVHGDTANTPMGMGTYGSRSIAVGGSAMVRA TEKIIAKAKKIAAHLMEAGEGDIELKDGAFSVAGTDKSVAWGDVTLAAYVPHNYPLEDIEPGLEETAFYDPNNFTYPSGA YACEVEVDPDTGKVEVMSFAAADDFGNVINPMIVEGQVHGGIAQGIGQALLENVSYDENGQLLSASYMDYTMPRADDVPM FQVDHSSQTPCTHNPLGVKGCGEAGAIGSPPSVVNAVVDALQRGGHTSVTHIDMPLTPSRVWSAMQG
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=801, Percent_Identity=25.4681647940075, Blast_Score=162, Evalue=9e-40, Organism=Homo sapiens, GI91823271, Length=812, Percent_Identity=24.384236453202, Blast_Score=151, Evalue=2e-36, Organism=Escherichia coli, GI1789230, Length=801, Percent_Identity=28.9637952559301, Blast_Score=236, Evalue=5e-63, Organism=Escherichia coli, GI1789246, Length=827, Percent_Identity=24.3047158403869, Blast_Score=192, Evalue=7e-50, Organism=Escherichia coli, GI1786478, Length=774, Percent_Identity=25.3229974160207, Blast_Score=124, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17540638, Length=817, Percent_Identity=24.235006119951, Blast_Score=152, Evalue=7e-37, Organism=Caenorhabditis elegans, GI17539860, Length=804, Percent_Identity=24.6268656716418, Blast_Score=149, Evalue=5e-36, Organism=Caenorhabditis elegans, GI32566215, Length=595, Percent_Identity=24.7058823529412, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI17737937, Length=810, Percent_Identity=25.679012345679, Blast_Score=158, Evalue=1e-38, Organism=Drosophila melanogaster, GI24647201, Length=794, Percent_Identity=22.2921914357683, Blast_Score=104, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 83972; Mature: 83841
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKDSGIGASSKRREDVRFLTGQGRYTDDINLHGQAYVHFLRSDVAHGVLNGVDTSAAAA CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH MPGVVKIFTGADFEGVGGVPCGWQVTDKHGEPMQEPAHPVLAQGKVRYVGDAIAAVVADT CCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCEEEHHHHHHHHHHHH AEQARNAAEAIVLDIEELPAVVDMKAAVADGATKVHDDLTSNLCYDWGFVEENKPQVEAA HHHHHCCHHEEEEEHHHCCHHHHHHHHHHCCCHHHHHHHHHCCEECCCCCCCCCCHHHHH FEAAAHVTSLELVNNRLSPNPMEPRVAVGDYNAGTDDSTLYTTSQNPHVIRLLMGAFVLG HHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHC IPEHKLRVVAPDVGGGFGSKIFHYVEEAFCTLAAKQCRRPVKWTSSRSEAFITDAHGRDH CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCC VTKIELALDADNNFTGIRTETYANMGAYLSTFAPSIPTWLHGTLMAGNYKTPNIYVNVKA EEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHCCEEEECCCCCCEEEEEEEE VFTNTVPVDAYRGAGRPEATYQLERVIDKAARELGVDPIALRRQNFITEFPYATPVAVEY EEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEE DTGDYEGTMTKLLEMIDRDGFEARRAASEANGKLRGLGVNCYIEACGIAPSALVGQLGAR CCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEEEEEECCCCHHHHHHHHHCC AGLYESATVRVNATGGLVVMTGSHSHGQGHETSFAQVVADMIGLPEDQVEIVHGDTANTP CCCCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCC MGMGTYGSRSIAVGGSAMVRATEKIIAKAKKIAAHLMEAGEGDIELKDGAFSVAGTDKSV CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCE AWGDVTLAAYVPHNYPLEDIEPGLEETAFYDPNNFTYPSGAYACEVEVDPDTGKVEVMSF EECCEEEEEECCCCCCHHHCCCCHHHCEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEE AAADDFGNVINPMIVEGQVHGGIAQGIGQALLENVSYDENGQLLSASYMDYTMPRADDVP ECHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECHHCCCCCCCCCC MFQVDHSSQTPCTHNPLGVKGCGEAGAIGSPPSVVNAVVDALQRGGHTSVTHIDMPLTPS EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHH RVWSAMQG HHHHHHCC >Mature Secondary Structure PKDSGIGASSKRREDVRFLTGQGRYTDDINLHGQAYVHFLRSDVAHGVLNGVDTSAAAA CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH MPGVVKIFTGADFEGVGGVPCGWQVTDKHGEPMQEPAHPVLAQGKVRYVGDAIAAVVADT CCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCEEEHHHHHHHHHHHH AEQARNAAEAIVLDIEELPAVVDMKAAVADGATKVHDDLTSNLCYDWGFVEENKPQVEAA HHHHHCCHHEEEEEHHHCCHHHHHHHHHHCCCHHHHHHHHHCCEECCCCCCCCCCHHHHH FEAAAHVTSLELVNNRLSPNPMEPRVAVGDYNAGTDDSTLYTTSQNPHVIRLLMGAFVLG HHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHC IPEHKLRVVAPDVGGGFGSKIFHYVEEAFCTLAAKQCRRPVKWTSSRSEAFITDAHGRDH CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCC VTKIELALDADNNFTGIRTETYANMGAYLSTFAPSIPTWLHGTLMAGNYKTPNIYVNVKA EEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHCCEEEECCCCCCEEEEEEEE VFTNTVPVDAYRGAGRPEATYQLERVIDKAARELGVDPIALRRQNFITEFPYATPVAVEY EEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEE DTGDYEGTMTKLLEMIDRDGFEARRAASEANGKLRGLGVNCYIEACGIAPSALVGQLGAR CCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEEEEEECCCCHHHHHHHHHCC AGLYESATVRVNATGGLVVMTGSHSHGQGHETSFAQVVADMIGLPEDQVEIVHGDTANTP CCCCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCC MGMGTYGSRSIAVGGSAMVRATEKIIAKAKKIAAHLMEAGEGDIELKDGAFSVAGTDKSV CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCE AWGDVTLAAYVPHNYPLEDIEPGLEETAFYDPNNFTYPSGAYACEVEVDPDTGKVEVMSF EECCEEEEEECCCCCCHHHCCCCHHHCEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEE AAADDFGNVINPMIVEGQVHGGIAQGIGQALLENVSYDENGQLLSASYMDYTMPRADDVP ECHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECHHCCCCCCCCCC MFQVDHSSQTPCTHNPLGVKGCGEAGAIGSPPSVVNAVVDALQRGGHTSVTHIDMPLTPS EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHH RVWSAMQG HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]