| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054255
Identifier: 89054255
GI number: 89054255
Start: 1752560
End: 1752886
Strand: Direct
Name: 89054255
Synonym: Jann_1764
Alternate gene names: NA
Gene position: 1752560-1752886 (Clockwise)
Preceding gene: 89054254
Following gene: 89054256
Centisome position: 40.59
GC content: 65.14
Gene sequence:
>327_bases ATGGCCGACTTCGTGGAAATCGGAAGCGATGATCCCACGGCCACGAAAGCGTTCTTTGCGGATGTCTTCGGGTGGCAGTG GGAGGCGTTCGGCGACGGCGATGGCGGGCTTGTGCGGGACGGTGACCGTCAGGTCGGTCTCCACGTTGAGGACACGCCAC TGGTCGTGCCGTATTTCACCGTCGATGACATCGTGGCAACCGCGCGGCGGGTGACCGAGGCCGGTGGTCAGGTGATGGGC GGCGTTGCAGAGGAAGGGATGCTTGGGCGATTTGCCACCTGCACCGATCCGCGCGGCGCTCGGTTCGGCCTGCATCAACG CGCCTGA
Upstream 100 bases:
>100_bases TTGAAGGCAATATTTGCCGCTGCACGGGCTACCACAACATCGTCAAGGCGATCATGGCCGCGTCGGGCCAGGATGTGGCC CCGATGGCGGCGGAGTAGCG
Downstream 100 bases:
>100_bases GGACTGAAACAACGACGTTACGGTCCCGGCCTGTCCGGGTCCGATTGTAACCAAAAGGGGTTGGGAGGCCCCGTCGACCC GGACCGGCTCCCTATGGTGG
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MADFVEIGSDDPTATKAFFADVFGWQWEAFGDGDGGLVRDGDRQVGLHVEDTPLVVPYFTVDDIVATARRVTEAGGQVMG GVAEEGMLGRFATCTDPRGARFGLHQRA
Sequences:
>Translated_108_residues MADFVEIGSDDPTATKAFFADVFGWQWEAFGDGDGGLVRDGDRQVGLHVEDTPLVVPYFTVDDIVATARRVTEAGGQVMG GVAEEGMLGRFATCTDPRGARFGLHQRA >Mature_107_residues ADFVEIGSDDPTATKAFFADVFGWQWEAFGDGDGGLVRDGDRQVGLHVEDTPLVVPYFTVDDIVATARRVTEAGGQVMGG VAEEGMLGRFATCTDPRGARFGLHQRA
Specific function: Unknown
COG id: COG3324
COG function: function code R; Predicted enzyme related to lactoylglutathione lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11580; Mature: 11449
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFVEIGSDDPTATKAFFADVFGWQWEAFGDGDGGLVRDGDRQVGLHVEDTPLVVPYFT CCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCEEECCCCEECEEECCCCEEEEEEC VDDIVATARRVTEAGGQVMGGVAEEGMLGRFATCTDPRGARFGLHQRA HHHHHHHHHHHHHCCCCEECCCCCCCCCCCEECCCCCCCCCCCCCCCC >Mature Secondary Structure ADFVEIGSDDPTATKAFFADVFGWQWEAFGDGDGGLVRDGDRQVGLHVEDTPLVVPYFT CCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCEEECCCCEECEEECCCCEEEEEEC VDDIVATARRVTEAGGQVMGGVAEEGMLGRFATCTDPRGARFGLHQRA HHHHHHHHHHHHHCCCCEECCCCCCCCCCCEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA