| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054223
Identifier: 89054223
GI number: 89054223
Start: 1725042
End: 1726331
Strand: Direct
Name: 89054223
Synonym: Jann_1732
Alternate gene names: NA
Gene position: 1725042-1726331 (Clockwise)
Preceding gene: 89054214
Following gene: 89054225
Centisome position: 39.95
GC content: 64.03
Gene sequence:
>1290_bases ATGAAGTTCACGGTTTCTGCTTTGGCGACGACCGCAATTATTGGCCTGATGGCTGGCGCGGCCTCGGCCCAGACCACAGA AATTATTCTGCCCGCTGCGGGTCTGTCCTGCGGAGGGGTGGGGGAGACCGGTCAATGGATGGGCGGCACCTCGGAGGCGT CCGACATCGCGACCGCCCCAGAGGCCCTGACGCTGTCGGGCCTGCCGATTGCACTGGATGGCAACACGGTGGGCTATTTC AGCGTGTCAGAGACAATGGATGTGCGGATCGAGGCGCAGCCCATGGGCGGCGGCGACAGTGTGATCGAGCTTTATGACGA GGCGGGCGTCCTGATCGTGACCGACGACGACAGCGGGGGCGGTTGGGCCTCGCGCGCGGAGACGTCGCTGGCCCCGGGCA ATTACTGCCTTGCAACCCGCGGCTATGCGGGCGGCGATCTGGTGACCGATATGCGCGTGGGCCGGTTGGAGCATGAGACG ATTACCGAAGGTCTGGGTGGCGGCTTCTTTGGCGGTGGTGACAGCTATTTCGTGGGCGTTGATGCCTGCACGGCGGAGAC GGACGCGACCGCCCTGTTTGAGGGTCCCTTGGACGCGCAACTGGGCGAAGGCGGCGGCATCAGCGTTGCCAATTCCATCG ACGGCGTGCCCTATTACCGCTTCACCCTGGCCAGCCCCCAGGCGATTTCCATCACGGCAGAGAACCCGTCGGCGGACCCC TACATCTACATTTTCGATGGCAATGGCGGACTTCTGGCGGAGAACGACGATTACCAATCGCTCAACAGCCGGGTGGATTT CACTGCGCCACTGCCGCCGGGCGATTATTGCATCGGCATGCGGGCCCTGGGCGACCCGACCCTGCCGGTGACGGTATCGG TGACGGGCTATGATGCGGCGGCGGCGCTGGCTGAGTTGTATGACCGGGGCGACGCGGCCCCGCCGATGGACGGCTCCTAC CCGATCCTTGATCTGGGTGTTTTGCCGGGCCGGTCGGTGCGCGATGCCCAGATCTCAGGCACGACGGCCACGTGGTATGC CTTTGAGGTTGATCAGCACGGGGCCGTGGTGATTGACGCGGTGGAGGTCACGGACAGCGATCCGATGCTGATCCTGTTCA ATGATCTGGGCCAGGAGATTGCCTTCAACGACGACCATGGCGGCTCTCTCAACAGTCAGATCACCGCGCGCGTCCAGGCG GGCCGGTATTTGCTGGCCGTGCGTCAGTATTCAGAGGGCTATAACGGCATCATCCGCATCGCGACGGAGCGGTTTGTTCC CGCGCCGTGA
Upstream 100 bases:
>100_bases CCGCGCGGAAATTCGCCCGGTGCATTGGAAATCAAACCAGAGGTGTGCATAGTCCGGCATGAGATGCGGGCCTTTGCCCG ATCCAATGGAGGATATCTTA
Downstream 100 bases:
>100_bases CATGACCTGAAACCAAAAAGGCCGCCCCTCGCACACGCGGTGGGCGGCCTTTTCCTTGACGTGCGGGCGGTCAGGCGGCG GACAGGGCGGCGATAATTCC
Product: peptidase-like
Products: NA
Alternate protein names: Peptidase-Like Protein; Bacterial Pre-Peptidase C- Domain Family; Peptidase-Like
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MKFTVSALATTAIIGLMAGAASAQTTEIILPAAGLSCGGVGETGQWMGGTSEASDIATAPEALTLSGLPIALDGNTVGYF SVSETMDVRIEAQPMGGGDSVIELYDEAGVLIVTDDDSGGGWASRAETSLAPGNYCLATRGYAGGDLVTDMRVGRLEHET ITEGLGGGFFGGGDSYFVGVDACTAETDATALFEGPLDAQLGEGGGISVANSIDGVPYYRFTLASPQAISITAENPSADP YIYIFDGNGGLLAENDDYQSLNSRVDFTAPLPPGDYCIGMRALGDPTLPVTVSVTGYDAAAALAELYDRGDAAPPMDGSY PILDLGVLPGRSVRDAQISGTTATWYAFEVDQHGAVVIDAVEVTDSDPMLILFNDLGQEIAFNDDHGGSLNSQITARVQA GRYLLAVRQYSEGYNGIIRIATERFVPAP
Sequences:
>Translated_429_residues MKFTVSALATTAIIGLMAGAASAQTTEIILPAAGLSCGGVGETGQWMGGTSEASDIATAPEALTLSGLPIALDGNTVGYF SVSETMDVRIEAQPMGGGDSVIELYDEAGVLIVTDDDSGGGWASRAETSLAPGNYCLATRGYAGGDLVTDMRVGRLEHET ITEGLGGGFFGGGDSYFVGVDACTAETDATALFEGPLDAQLGEGGGISVANSIDGVPYYRFTLASPQAISITAENPSADP YIYIFDGNGGLLAENDDYQSLNSRVDFTAPLPPGDYCIGMRALGDPTLPVTVSVTGYDAAAALAELYDRGDAAPPMDGSY PILDLGVLPGRSVRDAQISGTTATWYAFEVDQHGAVVIDAVEVTDSDPMLILFNDLGQEIAFNDDHGGSLNSQITARVQA GRYLLAVRQYSEGYNGIIRIATERFVPAP >Mature_429_residues MKFTVSALATTAIIGLMAGAASAQTTEIILPAAGLSCGGVGETGQWMGGTSEASDIATAPEALTLSGLPIALDGNTVGYF SVSETMDVRIEAQPMGGGDSVIELYDEAGVLIVTDDDSGGGWASRAETSLAPGNYCLATRGYAGGDLVTDMRVGRLEHET ITEGLGGGFFGGGDSYFVGVDACTAETDATALFEGPLDAQLGEGGGISVANSIDGVPYYRFTLASPQAISITAENPSADP YIYIFDGNGGLLAENDDYQSLNSRVDFTAPLPPGDYCIGMRALGDPTLPVTVSVTGYDAAAALAELYDRGDAAPPMDGSY PILDLGVLPGRSVRDAQISGTTATWYAFEVDQHGAVVIDAVEVTDSDPMLILFNDLGQEIAFNDDHGGSLNSQITARVQA GRYLLAVRQYSEGYNGIIRIATERFVPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44400; Mature: 44400
Theoretical pI: Translated: 3.71; Mature: 3.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTVSALATTAIIGLMAGAASAQTTEIILPAAGLSCGGVGETGQWMGGTSEASDIATAP CEEEHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCC EALTLSGLPIALDGNTVGYFSVSETMDVRIEAQPMGGGDSVIELYDEAGVLIVTDDDSGG CEEEECCCEEEECCCEEEEEEECCEEEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCC GWASRAETSLAPGNYCLATRGYAGGDLVTDMRVGRLEHETITEGLGGGFFGGGDSYFVGV CCCCCCCCCCCCCCEEEEECCCCCCCEEECHHCCCCCHHHHHHCCCCCCCCCCCCEEEEE DACTAETDATALFEGPLDAQLGEGGGISVANSIDGVPYYRFTLASPQAISITAENPSADP EEECCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCC YIYIFDGNGGLLAENDDYQSLNSRVDFTAPLPPGDYCIGMRALGDPTLPVTVSVTGYDAA EEEEEECCCCEEECCCCHHHHCCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCHHH AALAELYDRGDAAPPMDGSYPILDLGVLPGRSVRDAQISGTTATWYAFEVDQHGAVVIDA HHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCEEEEEEEEECCCCEEEEEE VEVTDSDPMLILFNDLGQEIAFNDDHGGSLNSQITARVQAGRYLLAVRQYSEGYNGIIRI EEECCCCCEEEEEECCCCEEEECCCCCCCCCCEEEEEEECCEEEEEEEECCCCCCCEEEE ATERFVPAP EECCCCCCC >Mature Secondary Structure MKFTVSALATTAIIGLMAGAASAQTTEIILPAAGLSCGGVGETGQWMGGTSEASDIATAP CEEEHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCC EALTLSGLPIALDGNTVGYFSVSETMDVRIEAQPMGGGDSVIELYDEAGVLIVTDDDSGG CEEEECCCEEEECCCEEEEEEECCEEEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCC GWASRAETSLAPGNYCLATRGYAGGDLVTDMRVGRLEHETITEGLGGGFFGGGDSYFVGV CCCCCCCCCCCCCCEEEEECCCCCCCEEECHHCCCCCHHHHHHCCCCCCCCCCCCEEEEE DACTAETDATALFEGPLDAQLGEGGGISVANSIDGVPYYRFTLASPQAISITAENPSADP EEECCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCC YIYIFDGNGGLLAENDDYQSLNSRVDFTAPLPPGDYCIGMRALGDPTLPVTVSVTGYDAA EEEEEECCCCEEECCCCHHHHCCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCHHH AALAELYDRGDAAPPMDGSYPILDLGVLPGRSVRDAQISGTTATWYAFEVDQHGAVVIDA HHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCEEEEEEEEECCCCEEEEEE VEVTDSDPMLILFNDLGQEIAFNDDHGGSLNSQITARVQAGRYLLAVRQYSEGYNGIIRI EEECCCCCEEEEEECCCCEEEECCCCCCCCCCEEEEEEECCEEEEEEEECCCCCCCEEEE ATERFVPAP EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA