| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054213
Identifier: 89054213
GI number: 89054213
Start: 1710018
End: 1711136
Strand: Direct
Name: 89054213
Synonym: Jann_1722
Alternate gene names: NA
Gene position: 1710018-1711136 (Clockwise)
Preceding gene: 89054211
Following gene: 89054214
Centisome position: 39.6
GC content: 67.47
Gene sequence:
>1119_bases ATGTCCACCCTCTCTCCCCCCCGGCGTACCCCGTGGCTGCTGATCGCGGCGCTTTACCTGACCGGGTTGATCGCGGGTAT GCAGTTCACCAAGATTTCCCTGACCCTGACGGGTCTTGCGGGCGTCTATCCGGGCTGGCCCGTGGCCTTTGCCGTCTCGG GCGTGGCGGTCATTGGGATCATCTTCGGCGTTATGGCGGGCGGCATCACGGCCAGTGTCGGCCCCCGCCGCGCGATCCTC TGGGCCCTTGGCGCTTCGGCGATCGTGGGCGGGCTGGAGGCGCTGTTGCCCCCGTTTCCCGTCTTCATGGCGCTGCGTGT GGTCGAAGGGGCCGGGCATCTGGTCCTTGTCGTGGCCGTGCCGACGCTGATGGCGCGGCTGGCGGCGCCCAAAGACAGCG CCATGGTTATGGGCCTTTGGGCGACGTTCTTTGGGGTGGGCTTCGCGACGGCGGCGCTTTTGATGGGCGACAACCTGCGC GCGGCCTATGGTGGCCACGCGGCATTCGCGGCTGTGATGCTGGCCGTCCTCTGGGCGATGCTGCCACGCGGCGTCGCCGT GGCGCGTCGCCCTTTACCGCGCCTGTCAGATCACCTGATGATCTATTCCACCCCGCGCCTGTTCGCGCCGGGGCTGGGCC ATGGCATCTATGCGATGCTGTTTCTGGCCCTGATCACCTTCCTACCCGTGGCGCTGGACGCGCTGTGGCTTGCGCCGATC CTGCCGTTGGCCGGGATTGCCGGGTCGTTTCTGGCCGGGGTCCTTGCGCGGTGGATCGCGCCTGGCACGCTGGTCTGGAC AACATTCGTGGCCATGGCGGTGCTGTTTGCGGTCACGATGGTCGCCGGGACCGCCGCGCCCTATATCCTGATCTTCACCA TGGGCTTCAGCGGCATCGTTGCGGGGGCAGGCTTCGCGGCTGTCCCATGGCTTAATCCGGCCGACGAGGACCGCGCGCTC AGCAACGGGGCTTTGGCGCAATTGGGCAATATCGGCACGTTCACCGGCACGCCGGTTCTGGCCGCCCTTGGGCCCGGCGC CTACTTCCCCACGGCGATCCTTGTCTGCATCGTGGCAGCAGCCGTCACCGGATTGGCCTATCGCGCCGCACGTTCCTGA
Upstream 100 bases:
>100_bases CGGCCAGCGCAAAGGGCTGGATTTCCCGCATTTTAGCGCGCGGCGGCCCCGGATGGGCTTGGCGATTGACGGGCGCGTGC AAACAGGGGATGCAGGCCCC
Downstream 100 bases:
>100_bases AACGTTCCTCTTTTTCAGTTGGAGACTCAGACGCTAGCGCCTATGTGTTGCGGAGCAGTTAACCGGGGGCGGGCATGGCC GAGCTGAAGAACATCGAGGT
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MSTLSPPRRTPWLLIAALYLTGLIAGMQFTKISLTLTGLAGVYPGWPVAFAVSGVAVIGIIFGVMAGGITASVGPRRAIL WALGASAIVGGLEALLPPFPVFMALRVVEGAGHLVLVVAVPTLMARLAAPKDSAMVMGLWATFFGVGFATAALLMGDNLR AAYGGHAAFAAVMLAVLWAMLPRGVAVARRPLPRLSDHLMIYSTPRLFAPGLGHGIYAMLFLALITFLPVALDALWLAPI LPLAGIAGSFLAGVLARWIAPGTLVWTTFVAMAVLFAVTMVAGTAAPYILIFTMGFSGIVAGAGFAAVPWLNPADEDRAL SNGALAQLGNIGTFTGTPVLAALGPGAYFPTAILVCIVAAAVTGLAYRAARS
Sequences:
>Translated_372_residues MSTLSPPRRTPWLLIAALYLTGLIAGMQFTKISLTLTGLAGVYPGWPVAFAVSGVAVIGIIFGVMAGGITASVGPRRAIL WALGASAIVGGLEALLPPFPVFMALRVVEGAGHLVLVVAVPTLMARLAAPKDSAMVMGLWATFFGVGFATAALLMGDNLR AAYGGHAAFAAVMLAVLWAMLPRGVAVARRPLPRLSDHLMIYSTPRLFAPGLGHGIYAMLFLALITFLPVALDALWLAPI LPLAGIAGSFLAGVLARWIAPGTLVWTTFVAMAVLFAVTMVAGTAAPYILIFTMGFSGIVAGAGFAAVPWLNPADEDRAL SNGALAQLGNIGTFTGTPVLAALGPGAYFPTAILVCIVAAAVTGLAYRAARS >Mature_371_residues STLSPPRRTPWLLIAALYLTGLIAGMQFTKISLTLTGLAGVYPGWPVAFAVSGVAVIGIIFGVMAGGITASVGPRRAILW ALGASAIVGGLEALLPPFPVFMALRVVEGAGHLVLVVAVPTLMARLAAPKDSAMVMGLWATFFGVGFATAALLMGDNLRA AYGGHAAFAAVMLAVLWAMLPRGVAVARRPLPRLSDHLMIYSTPRLFAPGLGHGIYAMLFLALITFLPVALDALWLAPIL PLAGIAGSFLAGVLARWIAPGTLVWTTFVAMAVLFAVTMVAGTAAPYILIFTMGFSGIVAGAGFAAVPWLNPADEDRALS NGALAQLGNIGTFTGTPVLAALGPGAYFPTAILVCIVAAAVTGLAYRAARS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38207; Mature: 38076
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLSPPRRTPWLLIAALYLTGLIAGMQFTKISLTLTGLAGVYPGWPVAFAVSGVAVIGI CCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEEEEEEHHHCCCCCCHHHHHHHHHHHHHH IFGVMAGGITASVGPRRAILWALGASAIVGGLEALLPPFPVFMALRVVEGAGHLVLVVAV HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEHHHH PTLMARLAAPKDSAMVMGLWATFFGVGFATAALLMGDNLRAAYGGHAAFAAVMLAVLWAM HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHH LPRGVAVARRPLPRLSDHLMIYSTPRLFAPGLGHGIYAMLFLALITFLPVALDALWLAPI HCCCHHHHHCCCCHHCCCEEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LPLAGIAGSFLAGVLARWIAPGTLVWTTFVAMAVLFAVTMVAGTAAPYILIFTMGFSGIV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHH AGAGFAAVPWLNPADEDRALSNGALAQLGNIGTFTGTPVLAALGPGAYFPTAILVCIVAA HCCCCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHH AVTGLAYRAARS HHHHHHHHHHCC >Mature Secondary Structure STLSPPRRTPWLLIAALYLTGLIAGMQFTKISLTLTGLAGVYPGWPVAFAVSGVAVIGI CCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEEEEEEHHHCCCCCCHHHHHHHHHHHHHH IFGVMAGGITASVGPRRAILWALGASAIVGGLEALLPPFPVFMALRVVEGAGHLVLVVAV HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEHHHH PTLMARLAAPKDSAMVMGLWATFFGVGFATAALLMGDNLRAAYGGHAAFAAVMLAVLWAM HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHH LPRGVAVARRPLPRLSDHLMIYSTPRLFAPGLGHGIYAMLFLALITFLPVALDALWLAPI HCCCHHHHHCCCCHHCCCEEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LPLAGIAGSFLAGVLARWIAPGTLVWTTFVAMAVLFAVTMVAGTAAPYILIFTMGFSGIV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHH AGAGFAAVPWLNPADEDRALSNGALAQLGNIGTFTGTPVLAALGPGAYFPTAILVCIVAA HCCCCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHH AVTGLAYRAARS HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA