| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054192
Identifier: 89054192
GI number: 89054192
Start: 1684961
End: 1685812
Strand: Direct
Name: 89054192
Synonym: Jann_1701
Alternate gene names: NA
Gene position: 1684961-1685812 (Clockwise)
Preceding gene: 89054190
Following gene: 89054193
Centisome position: 39.02
GC content: 70.07
Gene sequence:
>852_bases ATGGGCGACTTGGCCGATTTTGAAAAACTGAGCGCGTTGGAAAAGCGCCTGTCGCAGGCGCTGGACCGGATATCAACCGG GATCAAGGCGCGCGACGAGGCAAAAGGCGCTGAGGCGGAGGCCGAGGCCCGCGCCACGGAAGCCACGGAACGTGTCACGG CGCTGGAGGCGCGGCTGAGCGAGACGCAGGACGCGTTGAGTGAGGCGCAAAGCGATGTGGCGTCCGCGCGCGAAGAAGCG GATGCCGCCCGGGCGGAGGCCGATACGGCGCGGGCGCAGGCTGCGGCGACCCCGGCCGAGGATACGCAAGAGCTGGCCGA TCTGAAGACGCGCCTGGAGGCGGCCGAGGCACAGGTGACCGAGACGACCGCGTCCCTGGATGCGGCGCGGGCCGAGTTGG ACAAGGCCAAAGCCGCGCCGGTTTCGGATGCAGAGCCCGAGGATATGGAGAAGGCCCTGGCCGTGATGGGCCGCCGGGTC GAGCGGGCGCGGGCGGAACGGAACCAGGCGCGCACCGCCTGTGACGCGGCCACCGATGCGCTGGATGAGTTGAAAGAGGC CACCGGCGCCAGCGTCGACGACCGCATCCTGGCCCTGCGCCGCCAGTTGCGCCTGATGCGCACCCGGGCCGAGGATCTGG CGGCCCAGGTCTCCCTGCTGCAAAGCGGGGCCAGCGTGGACGCGTCGCTTCTGGATCAGGGCCTGCTGGCCGAGGTGGAG ACGCTGCGCCAATTGCGGGACACGGATGCGGCGGAACTGGACCGGATCGTGCAGGACATGCAGGCCGGGCTGGAGATGAC CGGGCCGGGGGCTGCTGGCCCGGACCTAACGGAGGGTGGCCAAAATGCCTGA
Upstream 100 bases:
>100_bases GACATCTGCCATGGAACGTGCACCAAGTGCGTCAGCGCAGGATGTCGGGAAATCTATAACACCGCGCGGTGGCGTGGATG ACGAGGGGGCACCGGCTGTC
Downstream 100 bases:
>100_bases GGTGGAAATCGAGATCGGCACCCGCATATTCAGCGTGGCCTGCCAGGAGGGCGAGGAGCCGTTCCTGCGCTCTGCCGCGA AGATGCTGGACACAGAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MGDLADFEKLSALEKRLSQALDRISTGIKARDEAKGAEAEAEARATEATERVTALEARLSETQDALSEAQSDVASAREEA DAARAEADTARAQAAATPAEDTQELADLKTRLEAAEAQVTETTASLDAARAELDKAKAAPVSDAEPEDMEKALAVMGRRV ERARAERNQARTACDAATDALDELKEATGASVDDRILALRRQLRLMRTRAEDLAAQVSLLQSGASVDASLLDQGLLAEVE TLRQLRDTDAAELDRIVQDMQAGLEMTGPGAAGPDLTEGGQNA
Sequences:
>Translated_283_residues MGDLADFEKLSALEKRLSQALDRISTGIKARDEAKGAEAEAEARATEATERVTALEARLSETQDALSEAQSDVASAREEA DAARAEADTARAQAAATPAEDTQELADLKTRLEAAEAQVTETTASLDAARAELDKAKAAPVSDAEPEDMEKALAVMGRRV ERARAERNQARTACDAATDALDELKEATGASVDDRILALRRQLRLMRTRAEDLAAQVSLLQSGASVDASLLDQGLLAEVE TLRQLRDTDAAELDRIVQDMQAGLEMTGPGAAGPDLTEGGQNA >Mature_282_residues GDLADFEKLSALEKRLSQALDRISTGIKARDEAKGAEAEAEARATEATERVTALEARLSETQDALSEAQSDVASAREEAD AARAEADTARAQAAATPAEDTQELADLKTRLEAAEAQVTETTASLDAARAELDKAKAAPVSDAEPEDMEKALAVMGRRVE RARAERNQARTACDAATDALDELKEATGASVDDRILALRRQLRLMRTRAEDLAAQVSLLQSGASVDASLLDQGLLAEVET LRQLRDTDAAELDRIVQDMQAGLEMTGPGAAGPDLTEGGQNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29970; Mature: 29839
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDLADFEKLSALEKRLSQALDRISTGIKARDEAKGAEAEAEARATEATERVTALEARLS CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH ETQDALSEAQSDVASAREEADAARAEADTARAQAAATPAEDTQELADLKTRLEAAEAQVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ETTASLDAARAELDKAKAAPVSDAEPEDMEKALAVMGRRVERARAERNQARTACDAATDA HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDELKEATGASVDDRILALRRQLRLMRTRAEDLAAQVSLLQSGASVDASLLDQGLLAEVE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH TLRQLRDTDAAELDRIVQDMQAGLEMTGPGAAGPDLTEGGQNA HHHHHHCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCC >Mature Secondary Structure GDLADFEKLSALEKRLSQALDRISTGIKARDEAKGAEAEAEARATEATERVTALEARLS CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH ETQDALSEAQSDVASAREEADAARAEADTARAQAAATPAEDTQELADLKTRLEAAEAQVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ETTASLDAARAELDKAKAAPVSDAEPEDMEKALAVMGRRVERARAERNQARTACDAATDA HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDELKEATGASVDDRILALRRQLRLMRTRAEDLAAQVSLLQSGASVDASLLDQGLLAEVE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH TLRQLRDTDAAELDRIVQDMQAGLEMTGPGAAGPDLTEGGQNA HHHHHHCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA