| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054193
Identifier: 89054193
GI number: 89054193
Start: 1685805
End: 1686239
Strand: Direct
Name: 89054193
Synonym: Jann_1702
Alternate gene names: NA
Gene position: 1685805-1686239 (Clockwise)
Preceding gene: 89054192
Following gene: 89054195
Centisome position: 39.04
GC content: 68.97
Gene sequence:
>435_bases ATGCCTGAGGTGGAAATCGAGATCGGCACCCGCATATTCAGCGTGGCCTGCCAGGAGGGCGAGGAGCCGTTCCTGCGCTC TGCCGCGAAGATGCTGGACACAGAAGCGGCCGTCGTGCTGGGACAGATCGGGCGGATGCCGCCCGAGCGGATGCTGTTGA TGGCGGGCCTGATGCTGGCCGACAAGACGGCGGCGCTGGAGGATGACCTGCGGGAATTGCAGGACAAGATCGCGACCCAG GACCGCGCGCTGCACACCGCCGAGGAGCGGTTGGCCGACCGGGGCCGCAAGATTGCAGAATTGCAGGATGCAGGCCCGGC GGGCGGCGTGCCTGTGCCGGAGGACCTGAGCGAAGGCCTTGCCGCGCTGGCCGCCAAGGCCGAGGCGATGGCCGAGATGC TGGACCCACCCTCCGGGAGCGCCTCTGGCGGGTAG
Upstream 100 bases:
>100_bases GATGCGGCGGAACTGGACCGGATCGTGCAGGACATGCAGGCCGGGCTGGAGATGACCGGGCCGGGGGCTGCTGGCCCGGA CCTAACGGAGGGTGGCCAAA
Downstream 100 bases:
>100_bases AGCCTGACGGCCTGAGGGATTGCGCCGCCTGACGGCGTCGCCGGGGGCCTCGCGCTGCGCGCTCGGCCCTTCAGCGCCTA GCCATTGAAGACAGACGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPEVEIEIGTRIFSVACQEGEEPFLRSAAKMLDTEAAVVLGQIGRMPPERMLLMAGLMLADKTAALEDDLRELQDKIATQ DRALHTAEERLADRGRKIAELQDAGPAGGVPVPEDLSEGLAALAAKAEAMAEMLDPPSGSASGG
Sequences:
>Translated_144_residues MPEVEIEIGTRIFSVACQEGEEPFLRSAAKMLDTEAAVVLGQIGRMPPERMLLMAGLMLADKTAALEDDLRELQDKIATQ DRALHTAEERLADRGRKIAELQDAGPAGGVPVPEDLSEGLAALAAKAEAMAEMLDPPSGSASGG >Mature_143_residues PEVEIEIGTRIFSVACQEGEEPFLRSAAKMLDTEAAVVLGQIGRMPPERMLLMAGLMLADKTAALEDDLRELQDKIATQD RALHTAEERLADRGRKIAELQDAGPAGGVPVPEDLSEGLAALAAKAEAMAEMLDPPSGSASGG
Specific function: Unknown
COG id: COG3027
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15183; Mature: 15051
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEVEIEIGTRIFSVACQEGEEPFLRSAAKMLDTEAAVVLGQIGRMPPERMLLMAGLMLA CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH DKTAALEDDLRELQDKIATQDRALHTAEERLADRGRKIAELQDAGPAGGVPVPEDLSEGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHH AALAAKAEAMAEMLDPPSGSASGG HHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PEVEIEIGTRIFSVACQEGEEPFLRSAAKMLDTEAAVVLGQIGRMPPERMLLMAGLMLA CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH DKTAALEDDLRELQDKIATQDRALHTAEERLADRGRKIAELQDAGPAGGVPVPEDLSEGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHH AALAAKAEAMAEMLDPPSGSASGG HHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA