Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054177

Identifier: 89054177

GI number: 89054177

Start: 1669744

End: 1670304

Strand: Direct

Name: 89054177

Synonym: Jann_1686

Alternate gene names: NA

Gene position: 1669744-1670304 (Clockwise)

Preceding gene: 89054176

Following gene: 89054188

Centisome position: 38.67

GC content: 66.31

Gene sequence:

>561_bases
ATGACCGAGGTGCTGACGGTCCGGTCCCGTGCGGAGTTGCGGGCATGGCTGGCAGAGCATCATGCCGGGGCGCGCGGCCT
TTGGCTGGCCACCTACAAGAAACACCATCCCGATTATCTGCCGTGGATGGAGGCGGTGGAGGAACTACTGTGCTGGGGTT
GGGTGGACGCGCAGGTGGCGGGGCTGGATGCGGACCGGATGAAGCACCGGATCGCGCCCCGGAAAGAAACGTCGGCCTGG
TCCGCGGTCAATAAGGATGCGGTGGCGCGAATGCGGGCAGAGGGGCGCATGACCTCCGCCGGAGAGGCTAAGATCGCCGC
GGCCATGGCCAATGGCATGTGGTCCTTCCTTGATGACGTGGAGCGGTTGGAGGTCCCCGACGATCTGGCGCAGGCCCTTG
GCGCGGCGCGGGACATTTGGGACGCCTATCCGCGCTCGGTCAAACGGGGCACGCTCGAATGGATCAAGACCGCAAAGACC
GCGCCCACCCGGGCGCGACGGATCGCGGATGTGGCGCAATCGGCCAGCGACGGTCTGCGTCCGACCATTTTCCGACGTTA
G

Upstream 100 bases:

>100_bases
GCGCGGGCGTGGGTTTCCCGGTGATCCGGCTGGTGCGGTTTTCCATTGGGCCCCATGATATCAGGGACTTACCCCCCGGC
ATGTGGCGGGAATTGGCCCC

Downstream 100 bases:

>100_bases
GCGAAGCTCATCGCTTTGCGCTGCTTGAGCCGGACGATGATGCCGCCGGTGGACATCAGCATGTAGAACCCCTGGATCAG
TGCCGCCGCCAGGTTGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MTEVLTVRSRAELRAWLAEHHAGARGLWLATYKKHHPDYLPWMEAVEELLCWGWVDAQVAGLDADRMKHRIAPRKETSAW
SAVNKDAVARMRAEGRMTSAGEAKIAAAMANGMWSFLDDVERLEVPDDLAQALGAARDIWDAYPRSVKRGTLEWIKTAKT
APTRARRIADVAQSASDGLRPTIFRR

Sequences:

>Translated_186_residues
MTEVLTVRSRAELRAWLAEHHAGARGLWLATYKKHHPDYLPWMEAVEELLCWGWVDAQVAGLDADRMKHRIAPRKETSAW
SAVNKDAVARMRAEGRMTSAGEAKIAAAMANGMWSFLDDVERLEVPDDLAQALGAARDIWDAYPRSVKRGTLEWIKTAKT
APTRARRIADVAQSASDGLRPTIFRR
>Mature_185_residues
TEVLTVRSRAELRAWLAEHHAGARGLWLATYKKHHPDYLPWMEAVEELLCWGWVDAQVAGLDADRMKHRIAPRKETSAWS
AVNKDAVARMRAEGRMTSAGEAKIAAAMANGMWSFLDDVERLEVPDDLAQALGAARDIWDAYPRSVKRGTLEWIKTAKTA
PTRARRIADVAQSASDGLRPTIFRR

Specific function: Unknown

COG id: COG4430

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20891; Mature: 20760

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEVLTVRSRAELRAWLAEHHAGARGLWLATYKKHHPDYLPWMEAVEELLCWGWVDAQVA
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHH
GLDADRMKHRIAPRKETSAWSAVNKDAVARMRAEGRMTSAGEAKIAAAMANGMWSFLDDV
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ERLEVPDDLAQALGAARDIWDAYPRSVKRGTLEWIKTAKTAPTRARRIADVAQSASDGLR
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
PTIFRR
CCCCCC
>Mature Secondary Structure 
TEVLTVRSRAELRAWLAEHHAGARGLWLATYKKHHPDYLPWMEAVEELLCWGWVDAQVA
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHH
GLDADRMKHRIAPRKETSAWSAVNKDAVARMRAEGRMTSAGEAKIAAAMANGMWSFLDDV
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ERLEVPDDLAQALGAARDIWDAYPRSVKRGTLEWIKTAKTAPTRARRIADVAQSASDGLR
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
PTIFRR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA