| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054146
Identifier: 89054146
GI number: 89054146
Start: 1638980
End: 1639648
Strand: Direct
Name: 89054146
Synonym: Jann_1655
Alternate gene names: NA
Gene position: 1638980-1639648 (Clockwise)
Preceding gene: 89054145
Following gene: 89054147
Centisome position: 37.96
GC content: 61.14
Gene sequence:
>669_bases ATGGTATGGCTTCGCGGACATTGGCAGTTAATCGCGTTAACGATTGTGGTGTTTGCGCTTTGGTCAACGCCTTTGGTGCT GCCCCTGAAGCTGCTTGTCGTGTTCTTCCATGAGCTGTCCCACGGTTTGGCGGCGATCCTGACGGGCGGTTCCATCGAGT CGATTTCCGTGAATTTTCAACAGGGTGGGGAGGCGTGGACCCGGGGCGGTTCTCGCTTCGTGATCCTGACGGCGGGATAC TTGGGGTCCTTGCTGATCGGGGCCGGGCTGCTTCTGGCGGCTCTCAAGGGCCGGGCGGACAGGGCGGTTCTGTCGGGCCT GGGCGTCGTGATGCTGCTGGTTCTGGTCCTTTACGTTCGCGATATCCCGGCGGCGTTGATCTGCGGGGCCACCGGTGCGG CGCTGCTGGCTGCCGGTCGATATCTGCGCGAACCCATTTGCGATCTGATCCTGCGGGTCATTGGCCTCAGCTCGCTGATC TATGTGCCCTATGACATCTTTGACGACACCCTGCGCCGCGCCTCACTACGCTCAGACGCGCGGATGCTGGCCGAAGAAAT CGGCGGCACCACGATGATGTGGGGGATGCTCTGGCTGATCCTCAGTTTCGTGGTGATTTTCTGGTGCCTGGGCCGCGGGC TTGGACGCGAGAGCAACATTCGGCTTTAA
Upstream 100 bases:
>100_bases AGAGGAAAACTGGCCGCAACGCGCCTGTGTGGGCGCCGATCTGGACCCGGGCTATTTGATTGAGATCGTGGCAACGGCCG TCGTGGGAAGTGACTGAGCG
Downstream 100 bases:
>100_bases CGCTAATTGGTTGCGCCAAGTGGGGGCGAATGCCTAGATACCCGGTAAGAGGCAGCTAGATGCGCGTGCCATGCGGCCGC GTCAAACCAGAGGTTTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MVWLRGHWQLIALTIVVFALWSTPLVLPLKLLVVFFHELSHGLAAILTGGSIESISVNFQQGGEAWTRGGSRFVILTAGY LGSLLIGAGLLLAALKGRADRAVLSGLGVVMLLVLVLYVRDIPAALICGATGAALLAAGRYLREPICDLILRVIGLSSLI YVPYDIFDDTLRRASLRSDARMLAEEIGGTTMMWGMLWLILSFVVIFWCLGRGLGRESNIRL
Sequences:
>Translated_222_residues MVWLRGHWQLIALTIVVFALWSTPLVLPLKLLVVFFHELSHGLAAILTGGSIESISVNFQQGGEAWTRGGSRFVILTAGY LGSLLIGAGLLLAALKGRADRAVLSGLGVVMLLVLVLYVRDIPAALICGATGAALLAAGRYLREPICDLILRVIGLSSLI YVPYDIFDDTLRRASLRSDARMLAEEIGGTTMMWGMLWLILSFVVIFWCLGRGLGRESNIRL >Mature_222_residues MVWLRGHWQLIALTIVVFALWSTPLVLPLKLLVVFFHELSHGLAAILTGGSIESISVNFQQGGEAWTRGGSRFVILTAGY LGSLLIGAGLLLAALKGRADRAVLSGLGVVMLLVLVLYVRDIPAALICGATGAALLAAGRYLREPICDLILRVIGLSSLI YVPYDIFDDTLRRASLRSDARMLAEEIGGTTMMWGMLWLILSFVVIFWCLGRGLGRESNIRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24121; Mature: 24121
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVWLRGHWQLIALTIVVFALWSTPLVLPLKLLVVFFHELSHGLAAILTGGSIESISVNFQ CEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHH QGGEAWTRGGSRFVILTAGYLGSLLIGAGLLLAALKGRADRAVLSGLGVVMLLVLVLYVR HCCHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH DIPAALICGATGAALLAAGRYLREPICDLILRVIGLSSLIYVPYDIFDDTLRRASLRSDA HCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMLAEEIGGTTMMWGMLWLILSFVVIFWCLGRGLGRESNIRL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MVWLRGHWQLIALTIVVFALWSTPLVLPLKLLVVFFHELSHGLAAILTGGSIESISVNFQ CEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHH QGGEAWTRGGSRFVILTAGYLGSLLIGAGLLLAALKGRADRAVLSGLGVVMLLVLVLYVR HCCHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH DIPAALICGATGAALLAAGRYLREPICDLILRVIGLSSLIYVPYDIFDDTLRRASLRSDA HCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMLAEEIGGTTMMWGMLWLILSFVVIFWCLGRGLGRESNIRL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA