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The map label for this gene is yoaB [C]

Identifier: 89054145

GI number: 89054145

Start: 1638620

End: 1638976

Strand: Direct

Name: yoaB [C]

Synonym: Jann_1654

Alternate gene names: 89054145

Gene position: 1638620-1638976 (Clockwise)

Preceding gene: 89054144

Following gene: 89054146

Centisome position: 37.95

GC content: 58.82

Gene sequence:

>357_bases
ATGACCATAGATCGCCATCCAGACGGCTTGATCGGTAAATGCAGTGCGGCCGTCCATGGTGGTCTGGCCTATATCGTGGC
CAATGCGCCTGAACCCGGCGAAGGTATTCTGGATCAGACCAGCGGATGCCTGGCAGAACTGGACCGATTGCTGCGATCCG
TTGGAAGTGATCGCACGCGAGTGTTGCAGGTGACGGTCTACCTCTCGGATATTGCTGACAAGCCCAGGATGGACAGCATC
TGGATGCCGTGGATCGGGGCAGAGGAAAACTGGCCGCAACGCGCCTGTGTGGGCGCCGATCTGGACCCGGGCTATTTGAT
TGAGATCGTGGCAACGGCCGTCGTGGGAAGTGACTGA

Upstream 100 bases:

>100_bases
GCCGGGTGGAGGCCGATGGTGAGGTCATCTATATGGTCAAGGACATGAAGGTCGCGCTGAGCGAAAGCTGAGCCCGCCGA
GGAAGCGCGGGAGCAGCGCC

Downstream 100 bases:

>100_bases
GCGATGGTATGGCTTCGCGGACATTGGCAGTTAATCGCGTTAACGATTGTGGTGTTTGCGCTTTGGTCAACGCCTTTGGT
GCTGCCCCTGAAGCTGCTTG

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MTIDRHPDGLIGKCSAAVHGGLAYIVANAPEPGEGILDQTSGCLAELDRLLRSVGSDRTRVLQVTVYLSDIADKPRMDSI
WMPWIGAEENWPQRACVGADLDPGYLIEIVATAVVGSD

Sequences:

>Translated_118_residues
MTIDRHPDGLIGKCSAAVHGGLAYIVANAPEPGEGILDQTSGCLAELDRLLRSVGSDRTRVLQVTVYLSDIADKPRMDSI
WMPWIGAEENWPQRACVGADLDPGYLIEIVATAVVGSD
>Mature_117_residues
TIDRHPDGLIGKCSAAVHGGLAYIVANAPEPGEGILDQTSGCLAELDRLLRSVGSDRTRVLQVTVYLSDIADKPRMDSIW
MPWIGAEENWPQRACVGADLDPGYLIEIVATAVVGSD

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12633; Mature: 12502

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDRHPDGLIGKCSAAVHGGLAYIVANAPEPGEGILDQTSGCLAELDRLLRSVGSDRTR
CCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
VLQVTVYLSDIADKPRMDSIWMPWIGAEENWPQRACVGADLDPGYLIEIVATAVVGSD
EEEEEEEEEHHCCCCCCCCEECCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TIDRHPDGLIGKCSAAVHGGLAYIVANAPEPGEGILDQTSGCLAELDRLLRSVGSDRTR
CCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
VLQVTVYLSDIADKPRMDSIWMPWIGAEENWPQRACVGADLDPGYLIEIVATAVVGSD
EEEEEEEEEHHCCCCCCCCEECCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA