Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054135

Identifier: 89054135

GI number: 89054135

Start: 1627071

End: 1627949

Strand: Direct

Name: 89054135

Synonym: Jann_1644

Alternate gene names: NA

Gene position: 1627071-1627949 (Clockwise)

Preceding gene: 89054134

Following gene: 89054136

Centisome position: 37.68

GC content: 62.57

Gene sequence:

>879_bases
ATGAGCGTTCAAGAGCTTGATCTTCATCTGAAATCCGGCACCACTGGCGTGTCGCGCTGCTGGCGGGTCACGCGCGCGGA
TGGCGTGCAATTCGGCTTCACCGATCACGATGGTGACCTCGACTTTGAGGGCACGACATTTCGCGCAGGTACTGGTCTGA
GCGCGGCGGCATTGAGCCAGACGACGGGCCTGTCAGTGGACAACACCGAGGCGGTGGGCGCCCTTTCTGACCTCGCCATC
ACCGAAGAAGACATCTTCGCGGGCCGATACGACGGCGCAGAGGTAGAGGCGTGGTTGGTGCAATGGGCCGCGCCCGAAAA
TCGGGTCCTGCAATTCCGGGGCTCGCTTGGCGAGATTACACGCGCGAATGGGGCGTTCTCGGCGGAGCTGCGTGGATTGA
CGGAGCAGATGAACGTGCCCACGGGGCGCGTGTTTCAGCGCACGTGCCAGGCGGTTCTGGGCGACGCGGAGTGCAAGTTC
GACTTGGCCACTGCAGGGTATGTGGCAGACGCCGCTGTCACGACGGGCGATGGTCTTACCTTCACATTTGAAGGGCTCAC
GAGCTTTGCGTCACGCTGGTTTGAGCGGGGGCAGATGCGGGTCCTGACGGGGGACGCCGCCGGGCTGACCGAAGCGGTGA
AAATCGACCAGGTGGCCGGGACCGTTCGCACAATCACGTTGTGGGACAATCTGCGCGAGAACATCGCACCGGGCGACGTG
GTTCGCCTGACAGCCGGCTGCGACAAGCGCATGGCGACCTGCCGTGCAAAGTTTGCGAACCTTGTTAATTATCAAGGTTT
TCCGGATATCCCCAGTGAAGACTGGCAAGCGGCCCATCCCACACGAGTGTCGTCGCGTAGCGGCGGTTCGCGCCGATGA

Upstream 100 bases:

>100_bases
TCGACGTCCCAGTGCGTTTTGATACGGATATGATCCAGACCTCCATGGCGACGTTTCAAGCGGGCGAGATGCCCGACGTG
CCTGTTGTGGAGATCCGGGT

Downstream 100 bases:

>100_bases
GCGCGGTGGTCGTTGCGGCGCAGGAATGGCTGGGCACGCCCTACGTGCATCAGGCGGCCTGCAAGGGGGCGGGATGTGAC
TGCCTGGGTCTGCTTCTGGG

Product: phage protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSVQELDLHLKSGTTGVSRCWRVTRADGVQFGFTDHDGDLDFEGTTFRAGTGLSAAALSQTTGLSVDNTEAVGALSDLAI
TEEDIFAGRYDGAEVEAWLVQWAAPENRVLQFRGSLGEITRANGAFSAELRGLTEQMNVPTGRVFQRTCQAVLGDAECKF
DLATAGYVADAAVTTGDGLTFTFEGLTSFASRWFERGQMRVLTGDAAGLTEAVKIDQVAGTVRTITLWDNLRENIAPGDV
VRLTAGCDKRMATCRAKFANLVNYQGFPDIPSEDWQAAHPTRVSSRSGGSRR

Sequences:

>Translated_292_residues
MSVQELDLHLKSGTTGVSRCWRVTRADGVQFGFTDHDGDLDFEGTTFRAGTGLSAAALSQTTGLSVDNTEAVGALSDLAI
TEEDIFAGRYDGAEVEAWLVQWAAPENRVLQFRGSLGEITRANGAFSAELRGLTEQMNVPTGRVFQRTCQAVLGDAECKF
DLATAGYVADAAVTTGDGLTFTFEGLTSFASRWFERGQMRVLTGDAAGLTEAVKIDQVAGTVRTITLWDNLRENIAPGDV
VRLTAGCDKRMATCRAKFANLVNYQGFPDIPSEDWQAAHPTRVSSRSGGSRR
>Mature_291_residues
SVQELDLHLKSGTTGVSRCWRVTRADGVQFGFTDHDGDLDFEGTTFRAGTGLSAAALSQTTGLSVDNTEAVGALSDLAIT
EEDIFAGRYDGAEVEAWLVQWAAPENRVLQFRGSLGEITRANGAFSAELRGLTEQMNVPTGRVFQRTCQAVLGDAECKFD
LATAGYVADAAVTTGDGLTFTFEGLTSFASRWFERGQMRVLTGDAAGLTEAVKIDQVAGTVRTITLWDNLRENIAPGDVV
RLTAGCDKRMATCRAKFANLVNYQGFPDIPSEDWQAAHPTRVSSRSGGSRR

Specific function: Unknown

COG id: COG5449

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31433; Mature: 31302

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQELDLHLKSGTTGVSRCWRVTRADGVQFGFTDHDGDLDFEGTTFRAGTGLSAAALSQ
CCHHHEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECCCCCCHHHHHH
TTGLSVDNTEAVGALSDLAITEEDIFAGRYDGAEVEAWLVQWAAPENRVLQFRGSLGEIT
HCCCCCCCCHHHHHHHHHEECHHHHHCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCC
RANGAFSAELRGLTEQMNVPTGRVFQRTCQAVLGDAECKFDLATAGYVADAAVTTGDGLT
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCEEECCEEECCCCCE
FTFEGLTSFASRWFERGQMRVLTGDAAGLTEAVKIDQVAGTVRTITLWDNLRENIAPGDV
EEHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHCCCCCE
VRLTAGCDKRMATCRAKFANLVNYQGFPDIPSEDWQAAHPTRVSSRSGGSRR
EEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVQELDLHLKSGTTGVSRCWRVTRADGVQFGFTDHDGDLDFEGTTFRAGTGLSAAALSQ
CHHHEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECCCCCCHHHHHH
TTGLSVDNTEAVGALSDLAITEEDIFAGRYDGAEVEAWLVQWAAPENRVLQFRGSLGEIT
HCCCCCCCCHHHHHHHHHEECHHHHHCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCC
RANGAFSAELRGLTEQMNVPTGRVFQRTCQAVLGDAECKFDLATAGYVADAAVTTGDGLT
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCEEECCEEECCCCCE
FTFEGLTSFASRWFERGQMRVLTGDAAGLTEAVKIDQVAGTVRTITLWDNLRENIAPGDV
EEHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHCCCCCE
VRLTAGCDKRMATCRAKFANLVNYQGFPDIPSEDWQAAHPTRVSSRSGGSRR
EEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA