Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054134

Identifier: 89054134

GI number: 89054134

Start: 1626442

End: 1627074

Strand: Direct

Name: 89054134

Synonym: Jann_1643

Alternate gene names: NA

Gene position: 1626442-1627074 (Clockwise)

Preceding gene: 89054133

Following gene: 89054135

Centisome position: 37.67

GC content: 60.03

Gene sequence:

>633_bases
ATGGGATTTCATGAAGTTCGTTTCCCCACCAAACTCAGCTTCGGGTCCATGGGTGGGCCTGAGCGTCGCACCGAGGTCGT
GGCGCTGACCAACGGGTTCGAGGAGCGCAACACGCCCTGGGCCCATTCCCGCAGGCGCTATGATGCGGGCATTTCCATGC
GCTCGCTCGATGATATCGCGCTGGTGGTCGACTTTTTCGAAGCGCGTCGGGGCCAGCTTTATGGCTTCCGCTGGAAGGAT
TGGTCTGATTTCAAATCCTGCGCCCCGTCTGCCGATCCGGGTTTTCAGGATCAGGTGATTGGCACAGGTGATGGCGTGAC
GCTGACGTTTCAGCTGCGCAAGACCTATCAATCCGGCGTCAACTCCTACGCGCGCCCCCTGACGAAGCCTGTGGAGGCGA
CCGTATTGGTTGGCGTGTCCGTGATCGAGCAGGTCGAAGGGACGGACTTCACGGTCAATTACACGACGGGCGAGATCACC
TTCGCGACCGCACCCCCCAACGGCGTCGAGGTGACAGCGGGCTATGAGTTCGACGTCCCAGTGCGTTTTGATACGGATAT
GATCCAGACCTCCATGGCGACGTTTCAAGCGGGCGAGATGCCCGACGTGCCTGTTGTGGAGATCCGGGTATGA

Upstream 100 bases:

>100_bases
GCCCGATGTGGCGGGGTTCCAGCGGTCGTCCAGCCAGGTCGCCGCCCAAATGCAACGCGCCTTGGCGCGTGGCCAACGCA
ACCGGTAGGGGAGAAAAACC

Downstream 100 bases:

>100_bases
GCGTTCAAGAGCTTGATCTTCATCTGAAATCCGGCACCACTGGCGTGTCGCGCTGCTGGCGGGTCACGCGCGCGGATGGC
GTGCAATTCGGCTTCACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MGFHEVRFPTKLSFGSMGGPERRTEVVALTNGFEERNTPWAHSRRRYDAGISMRSLDDIALVVDFFEARRGQLYGFRWKD
WSDFKSCAPSADPGFQDQVIGTGDGVTLTFQLRKTYQSGVNSYARPLTKPVEATVLVGVSVIEQVEGTDFTVNYTTGEIT
FATAPPNGVEVTAGYEFDVPVRFDTDMIQTSMATFQAGEMPDVPVVEIRV

Sequences:

>Translated_210_residues
MGFHEVRFPTKLSFGSMGGPERRTEVVALTNGFEERNTPWAHSRRRYDAGISMRSLDDIALVVDFFEARRGQLYGFRWKD
WSDFKSCAPSADPGFQDQVIGTGDGVTLTFQLRKTYQSGVNSYARPLTKPVEATVLVGVSVIEQVEGTDFTVNYTTGEIT
FATAPPNGVEVTAGYEFDVPVRFDTDMIQTSMATFQAGEMPDVPVVEIRV
>Mature_209_residues
GFHEVRFPTKLSFGSMGGPERRTEVVALTNGFEERNTPWAHSRRRYDAGISMRSLDDIALVVDFFEARRGQLYGFRWKDW
SDFKSCAPSADPGFQDQVIGTGDGVTLTFQLRKTYQSGVNSYARPLTKPVEATVLVGVSVIEQVEGTDFTVNYTTGEITF
ATAPPNGVEVTAGYEFDVPVRFDTDMIQTSMATFQAGEMPDVPVVEIRV

Specific function: Unknown

COG id: COG5448

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23328; Mature: 23197

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFHEVRFPTKLSFGSMGGPERRTEVVALTNGFEERNTPWAHSRRRYDAGISMRSLDDIA
CCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCHHHHCCCCCCCCCHHH
LVVDFFEARRGQLYGFRWKDWSDFKSCAPSADPGFQDQVIGTGDGVTLTFQLRKTYQSGV
HHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEEHHHHHHHH
NSYARPLTKPVEATVLVGVSVIEQVEGTDFTVNYTTGEITFATAPPNGVEVTAGYEFDVP
HHHHHHCCCCCHHEEEHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCEEEEECCEECCC
VRFDTDMIQTSMATFQAGEMPDVPVVEIRV
EEECHHHHHHHHHHHCCCCCCCCCEEEEEC
>Mature Secondary Structure 
GFHEVRFPTKLSFGSMGGPERRTEVVALTNGFEERNTPWAHSRRRYDAGISMRSLDDIA
CCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCHHHHCCCCCCCCCHHH
LVVDFFEARRGQLYGFRWKDWSDFKSCAPSADPGFQDQVIGTGDGVTLTFQLRKTYQSGV
HHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEEHHHHHHHH
NSYARPLTKPVEATVLVGVSVIEQVEGTDFTVNYTTGEITFATAPPNGVEVTAGYEFDVP
HHHHHHCCCCCHHEEEHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCEEEEECCEECCC
VRFDTDMIQTSMATFQAGEMPDVPVVEIRV
EEECHHHHHHHHHHHCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA