| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054134
Identifier: 89054134
GI number: 89054134
Start: 1626442
End: 1627074
Strand: Direct
Name: 89054134
Synonym: Jann_1643
Alternate gene names: NA
Gene position: 1626442-1627074 (Clockwise)
Preceding gene: 89054133
Following gene: 89054135
Centisome position: 37.67
GC content: 60.03
Gene sequence:
>633_bases ATGGGATTTCATGAAGTTCGTTTCCCCACCAAACTCAGCTTCGGGTCCATGGGTGGGCCTGAGCGTCGCACCGAGGTCGT GGCGCTGACCAACGGGTTCGAGGAGCGCAACACGCCCTGGGCCCATTCCCGCAGGCGCTATGATGCGGGCATTTCCATGC GCTCGCTCGATGATATCGCGCTGGTGGTCGACTTTTTCGAAGCGCGTCGGGGCCAGCTTTATGGCTTCCGCTGGAAGGAT TGGTCTGATTTCAAATCCTGCGCCCCGTCTGCCGATCCGGGTTTTCAGGATCAGGTGATTGGCACAGGTGATGGCGTGAC GCTGACGTTTCAGCTGCGCAAGACCTATCAATCCGGCGTCAACTCCTACGCGCGCCCCCTGACGAAGCCTGTGGAGGCGA CCGTATTGGTTGGCGTGTCCGTGATCGAGCAGGTCGAAGGGACGGACTTCACGGTCAATTACACGACGGGCGAGATCACC TTCGCGACCGCACCCCCCAACGGCGTCGAGGTGACAGCGGGCTATGAGTTCGACGTCCCAGTGCGTTTTGATACGGATAT GATCCAGACCTCCATGGCGACGTTTCAAGCGGGCGAGATGCCCGACGTGCCTGTTGTGGAGATCCGGGTATGA
Upstream 100 bases:
>100_bases GCCCGATGTGGCGGGGTTCCAGCGGTCGTCCAGCCAGGTCGCCGCCCAAATGCAACGCGCCTTGGCGCGTGGCCAACGCA ACCGGTAGGGGAGAAAAACC
Downstream 100 bases:
>100_bases GCGTTCAAGAGCTTGATCTTCATCTGAAATCCGGCACCACTGGCGTGTCGCGCTGCTGGCGGGTCACGCGCGCGGATGGC GTGCAATTCGGCTTCACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MGFHEVRFPTKLSFGSMGGPERRTEVVALTNGFEERNTPWAHSRRRYDAGISMRSLDDIALVVDFFEARRGQLYGFRWKD WSDFKSCAPSADPGFQDQVIGTGDGVTLTFQLRKTYQSGVNSYARPLTKPVEATVLVGVSVIEQVEGTDFTVNYTTGEIT FATAPPNGVEVTAGYEFDVPVRFDTDMIQTSMATFQAGEMPDVPVVEIRV
Sequences:
>Translated_210_residues MGFHEVRFPTKLSFGSMGGPERRTEVVALTNGFEERNTPWAHSRRRYDAGISMRSLDDIALVVDFFEARRGQLYGFRWKD WSDFKSCAPSADPGFQDQVIGTGDGVTLTFQLRKTYQSGVNSYARPLTKPVEATVLVGVSVIEQVEGTDFTVNYTTGEIT FATAPPNGVEVTAGYEFDVPVRFDTDMIQTSMATFQAGEMPDVPVVEIRV >Mature_209_residues GFHEVRFPTKLSFGSMGGPERRTEVVALTNGFEERNTPWAHSRRRYDAGISMRSLDDIALVVDFFEARRGQLYGFRWKDW SDFKSCAPSADPGFQDQVIGTGDGVTLTFQLRKTYQSGVNSYARPLTKPVEATVLVGVSVIEQVEGTDFTVNYTTGEITF ATAPPNGVEVTAGYEFDVPVRFDTDMIQTSMATFQAGEMPDVPVVEIRV
Specific function: Unknown
COG id: COG5448
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23328; Mature: 23197
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFHEVRFPTKLSFGSMGGPERRTEVVALTNGFEERNTPWAHSRRRYDAGISMRSLDDIA CCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCHHHHCCCCCCCCCHHH LVVDFFEARRGQLYGFRWKDWSDFKSCAPSADPGFQDQVIGTGDGVTLTFQLRKTYQSGV HHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEEHHHHHHHH NSYARPLTKPVEATVLVGVSVIEQVEGTDFTVNYTTGEITFATAPPNGVEVTAGYEFDVP HHHHHHCCCCCHHEEEHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCEEEEECCEECCC VRFDTDMIQTSMATFQAGEMPDVPVVEIRV EEECHHHHHHHHHHHCCCCCCCCCEEEEEC >Mature Secondary Structure GFHEVRFPTKLSFGSMGGPERRTEVVALTNGFEERNTPWAHSRRRYDAGISMRSLDDIA CCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCHHHHCCCCCCCCCHHH LVVDFFEARRGQLYGFRWKDWSDFKSCAPSADPGFQDQVIGTGDGVTLTFQLRKTYQSGV HHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEEHHHHHHHH NSYARPLTKPVEATVLVGVSVIEQVEGTDFTVNYTTGEITFATAPPNGVEVTAGYEFDVP HHHHHHCCCCCHHEEEHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCEEEEECCEECCC VRFDTDMIQTSMATFQAGEMPDVPVVEIRV EEECHHHHHHHHHHHCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA