| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054135
Identifier: 89054135
GI number: 89054135
Start: 1627071
End: 1627949
Strand: Direct
Name: 89054135
Synonym: Jann_1644
Alternate gene names: NA
Gene position: 1627071-1627949 (Clockwise)
Preceding gene: 89054134
Following gene: 89054136
Centisome position: 37.68
GC content: 62.57
Gene sequence:
>879_bases ATGAGCGTTCAAGAGCTTGATCTTCATCTGAAATCCGGCACCACTGGCGTGTCGCGCTGCTGGCGGGTCACGCGCGCGGA TGGCGTGCAATTCGGCTTCACCGATCACGATGGTGACCTCGACTTTGAGGGCACGACATTTCGCGCAGGTACTGGTCTGA GCGCGGCGGCATTGAGCCAGACGACGGGCCTGTCAGTGGACAACACCGAGGCGGTGGGCGCCCTTTCTGACCTCGCCATC ACCGAAGAAGACATCTTCGCGGGCCGATACGACGGCGCAGAGGTAGAGGCGTGGTTGGTGCAATGGGCCGCGCCCGAAAA TCGGGTCCTGCAATTCCGGGGCTCGCTTGGCGAGATTACACGCGCGAATGGGGCGTTCTCGGCGGAGCTGCGTGGATTGA CGGAGCAGATGAACGTGCCCACGGGGCGCGTGTTTCAGCGCACGTGCCAGGCGGTTCTGGGCGACGCGGAGTGCAAGTTC GACTTGGCCACTGCAGGGTATGTGGCAGACGCCGCTGTCACGACGGGCGATGGTCTTACCTTCACATTTGAAGGGCTCAC GAGCTTTGCGTCACGCTGGTTTGAGCGGGGGCAGATGCGGGTCCTGACGGGGGACGCCGCCGGGCTGACCGAAGCGGTGA AAATCGACCAGGTGGCCGGGACCGTTCGCACAATCACGTTGTGGGACAATCTGCGCGAGAACATCGCACCGGGCGACGTG GTTCGCCTGACAGCCGGCTGCGACAAGCGCATGGCGACCTGCCGTGCAAAGTTTGCGAACCTTGTTAATTATCAAGGTTT TCCGGATATCCCCAGTGAAGACTGGCAAGCGGCCCATCCCACACGAGTGTCGTCGCGTAGCGGCGGTTCGCGCCGATGA
Upstream 100 bases:
>100_bases TCGACGTCCCAGTGCGTTTTGATACGGATATGATCCAGACCTCCATGGCGACGTTTCAAGCGGGCGAGATGCCCGACGTG CCTGTTGTGGAGATCCGGGT
Downstream 100 bases:
>100_bases GCGCGGTGGTCGTTGCGGCGCAGGAATGGCTGGGCACGCCCTACGTGCATCAGGCGGCCTGCAAGGGGGCGGGATGTGAC TGCCTGGGTCTGCTTCTGGG
Product: phage protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSVQELDLHLKSGTTGVSRCWRVTRADGVQFGFTDHDGDLDFEGTTFRAGTGLSAAALSQTTGLSVDNTEAVGALSDLAI TEEDIFAGRYDGAEVEAWLVQWAAPENRVLQFRGSLGEITRANGAFSAELRGLTEQMNVPTGRVFQRTCQAVLGDAECKF DLATAGYVADAAVTTGDGLTFTFEGLTSFASRWFERGQMRVLTGDAAGLTEAVKIDQVAGTVRTITLWDNLRENIAPGDV VRLTAGCDKRMATCRAKFANLVNYQGFPDIPSEDWQAAHPTRVSSRSGGSRR
Sequences:
>Translated_292_residues MSVQELDLHLKSGTTGVSRCWRVTRADGVQFGFTDHDGDLDFEGTTFRAGTGLSAAALSQTTGLSVDNTEAVGALSDLAI TEEDIFAGRYDGAEVEAWLVQWAAPENRVLQFRGSLGEITRANGAFSAELRGLTEQMNVPTGRVFQRTCQAVLGDAECKF DLATAGYVADAAVTTGDGLTFTFEGLTSFASRWFERGQMRVLTGDAAGLTEAVKIDQVAGTVRTITLWDNLRENIAPGDV VRLTAGCDKRMATCRAKFANLVNYQGFPDIPSEDWQAAHPTRVSSRSGGSRR >Mature_291_residues SVQELDLHLKSGTTGVSRCWRVTRADGVQFGFTDHDGDLDFEGTTFRAGTGLSAAALSQTTGLSVDNTEAVGALSDLAIT EEDIFAGRYDGAEVEAWLVQWAAPENRVLQFRGSLGEITRANGAFSAELRGLTEQMNVPTGRVFQRTCQAVLGDAECKFD LATAGYVADAAVTTGDGLTFTFEGLTSFASRWFERGQMRVLTGDAAGLTEAVKIDQVAGTVRTITLWDNLRENIAPGDVV RLTAGCDKRMATCRAKFANLVNYQGFPDIPSEDWQAAHPTRVSSRSGGSRR
Specific function: Unknown
COG id: COG5449
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31433; Mature: 31302
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVQELDLHLKSGTTGVSRCWRVTRADGVQFGFTDHDGDLDFEGTTFRAGTGLSAAALSQ CCHHHEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECCCCCCHHHHHH TTGLSVDNTEAVGALSDLAITEEDIFAGRYDGAEVEAWLVQWAAPENRVLQFRGSLGEIT HCCCCCCCCHHHHHHHHHEECHHHHHCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCC RANGAFSAELRGLTEQMNVPTGRVFQRTCQAVLGDAECKFDLATAGYVADAAVTTGDGLT CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCEEECCEEECCCCCE FTFEGLTSFASRWFERGQMRVLTGDAAGLTEAVKIDQVAGTVRTITLWDNLRENIAPGDV EEHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHCCCCCE VRLTAGCDKRMATCRAKFANLVNYQGFPDIPSEDWQAAHPTRVSSRSGGSRR EEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVQELDLHLKSGTTGVSRCWRVTRADGVQFGFTDHDGDLDFEGTTFRAGTGLSAAALSQ CHHHEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECCCCCCHHHHHH TTGLSVDNTEAVGALSDLAITEEDIFAGRYDGAEVEAWLVQWAAPENRVLQFRGSLGEIT HCCCCCCCCHHHHHHHHHEECHHHHHCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCC RANGAFSAELRGLTEQMNVPTGRVFQRTCQAVLGDAECKFDLATAGYVADAAVTTGDGLT CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCEEECCEEECCCCCE FTFEGLTSFASRWFERGQMRVLTGDAAGLTEAVKIDQVAGTVRTITLWDNLRENIAPGDV EEHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHCCCCCE VRLTAGCDKRMATCRAKFANLVNYQGFPDIPSEDWQAAHPTRVSSRSGGSRR EEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA