| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054125
Identifier: 89054125
GI number: 89054125
Start: 1621520
End: 1622071
Strand: Direct
Name: 89054125
Synonym: Jann_1634
Alternate gene names: NA
Gene position: 1621520-1622071 (Clockwise)
Preceding gene: 89054124
Following gene: 89054126
Centisome position: 37.55
GC content: 57.07
Gene sequence:
>552_bases ATGAAAACAATTTCGTCAAGCGGACTGGAAGTAAAATTCCAGAGGTTCGACAACGAACTGACACTTGATGACGAATTTGT CATCGAGGGCTATGCGTCGTTGTTTGGGGCTAAGGATCAGGGCGGCGATGTCGTGGAAAAGGGGGCTTATGCAAAGTCTC TAAATGCGGATCGTCGGGTCAAGATGCTTTGGCAGCATGACCCGAATGAGCCCATCGGGATCTGGGACGAGATTCGCGAA GACGACCGTGGACTATACGTAAAAGGCCGCTTGCTGGAGTCGGTGTCGCGGGCCCGGGAAGCTGCCGCGCTGACCAAGGC GGGCGCGATTGACGGGCTGTCTATCGGCTACCGCACGATAAAATCCCACAAGAACGAGAAAGGCGCGCGTTGCCTTTCCG AAGTGGAGCTTTGGGAGGTGTCGCTTGTGACATTCCCCATGCTTCCCGAAGCGCGATTGGATGCCCATGAGGGCAAATCA AACGCGCTTCAAGACCTGGCGCAAGTGTTCGAGGACGCCCGCCTGACCCTGGCGGCCCGCAAGGCCCGCTGA
Upstream 100 bases:
>100_bases AAAACGCCTCTGGCTCGCTGTTTTTGGCGTAGTCTCGGTGATCCTGGCGCAAGGGGTCAACCAGTTACTCAACCTAAATA TTGGCGGTTAGGAGCCTGAT
Downstream 100 bases:
>100_bases TCTGTCGATCCCCATCAGGGGAGTAAACTCAACCACAAGGGATATCTCATGACCGAGACCCAGGACCGGGGCGCGAGCAG CGTACCCATGGCTGAAGTCA
Product: prohead peptidase
Products: NA
Alternate protein names: HK97 Family Phage Prohead Protease; Peptidase; Prohead Peptidase; Caudovirus Prohead Protease; HK97 Family Phage Capsid Protein; Head Maturation Protease; Phage Head Maturation Protease; Phage Prohead Protease And Phage Capsid Protein; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Protease; Phage Pro-Head Protease; Prophage LambdaSa2 Protease
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKTISSSGLEVKFQRFDNELTLDDEFVIEGYASLFGAKDQGGDVVEKGAYAKSLNADRRVKMLWQHDPNEPIGIWDEIRE DDRGLYVKGRLLESVSRAREAAALTKAGAIDGLSIGYRTIKSHKNEKGARCLSEVELWEVSLVTFPMLPEARLDAHEGKS NALQDLAQVFEDARLTLAARKAR
Sequences:
>Translated_183_residues MKTISSSGLEVKFQRFDNELTLDDEFVIEGYASLFGAKDQGGDVVEKGAYAKSLNADRRVKMLWQHDPNEPIGIWDEIRE DDRGLYVKGRLLESVSRAREAAALTKAGAIDGLSIGYRTIKSHKNEKGARCLSEVELWEVSLVTFPMLPEARLDAHEGKS NALQDLAQVFEDARLTLAARKAR >Mature_183_residues MKTISSSGLEVKFQRFDNELTLDDEFVIEGYASLFGAKDQGGDVVEKGAYAKSLNADRRVKMLWQHDPNEPIGIWDEIRE DDRGLYVKGRLLESVSRAREAAALTKAGAIDGLSIGYRTIKSHKNEKGARCLSEVELWEVSLVTFPMLPEARLDAHEGKS NALQDLAQVFEDARLTLAARKAR
Specific function: Unknown
COG id: COG3740
COG function: function code R; Phage head maturation protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20410; Mature: 20410
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTISSSGLEVKFQRFDNELTLDDEFVIEGYASLFGAKDQGGDVVEKGAYAKSLNADRRV CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHCCCCHHE KMLWQHDPNEPIGIWDEIREDDRGLYVKGRLLESVSRAREAAALTKAGAIDGLSIGYRTI EEEECCCCCCCCCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH KSHKNEKGARCLSEVELWEVSLVTFPMLPEARLDAHEGKSNALQDLAQVFEDARLTLAAR HHCCCCHHHHHHHHHHHHHHEEEEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC KAR CCC >Mature Secondary Structure MKTISSSGLEVKFQRFDNELTLDDEFVIEGYASLFGAKDQGGDVVEKGAYAKSLNADRRV CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHCCCCHHE KMLWQHDPNEPIGIWDEIREDDRGLYVKGRLLESVSRAREAAALTKAGAIDGLSIGYRTI EEEECCCCCCCCCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH KSHKNEKGARCLSEVELWEVSLVTFPMLPEARLDAHEGKSNALQDLAQVFEDARLTLAAR HHCCCCHHHHHHHHHHHHHHEEEEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC KAR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA