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The map label for this gene is 89054126

Identifier: 89054126

GI number: 89054126

Start: 1622120

End: 1623301

Strand: Direct

Name: 89054126

Synonym: Jann_1635

Alternate gene names: NA

Gene position: 1622120-1623301 (Clockwise)

Preceding gene: 89054125

Following gene: 89054127

Centisome position: 37.57

GC content: 61.08

Gene sequence:

>1182_bases
ATGACCGAGACCCAGGACCGGGGCGCGAGCAGCGTACCCATGGCTGAAGTCAAGACCGCGATCGGCGGATTCTTGAGTGA
GTTCAACCAATTCCAAGACGACATGAATGCAAAATTTCAAAAGCAGGAAGACCGTATCGCTATGCTCAACACGAAAACAA
ACACGTTTCAACGCCCCGCATTGTCGGCGGATGTCGACACCACCGCCCCCCACAAGCTGGCGCTGAAATCCTATCTTCGC
TGTGGCGATGATGATGCGCTTCGCGGCCTGGAACTGGAAGGCAAGGCGATGAACACCGCCGTCAATGCCGAAGGTGGCTA
TCTGGTCGATCCGCAGACGTCCGAGATGATCCAGTCGGTCCTACGCTCCTCGTCCTCCCTGCGCTCGGTCGCCAATGTGG
TGACGGTTGAAGCGACGTCCTTTGACGTGCTGATCGACAGCACCGATACCGGCGCCGGTTGGGCCGATGAGGTGTCCAAC
ACGACCGAGACCGACACGCCCACCATTGAGCGCATCTCCATCGCGCTGCACGAGCTGTCGGCGCTGCCCAAAGCGTCCCA
GCGTCTTCTGGACGACGCGGCATTTGACATCGAAGGCTGGCTGGCCGGTCGCATCGCCGACAAGTTCGCCCGCGCCGAGG
CCGCGTCCTTCATCACCGGTGACGGCTCTGGCAAGCCCACGGGCATGCTCACCCACCCCACCGTGGACAACGACAGCTGG
TCTTGGGGCAATCTGGGCTATGTCGCGACTGGCACCGCGGGCGATTTCGACAATACCAACGCCGCCGATGCAATTGTCGA
TCTGGTCTATGCACTGGGTGCACGCTACCGCGCCAACGCCAACTTCATCATGAACTCCAAGACCGCCGGTGCGGTGCGGA
AGATGAAAGACGCGGACGGCCGCTTCCTGTGGTCCGATGGTCTGGCCGCCGGTGAGCCCGCGCGTCTTATGGGCTACCCC
GTTCTGATCGCCGAGGATATGCCCGACATCGCAACCGATGCGATGGCGATTGCCTTCGGTGATTTCGGCGCCGGCTACAC
CATCGCCGAGCGTCCGGATCTGCGTGTGTTGCGTGACCCGTTCTCGGCCAAGCCGCATGTCCTGTTCTATGCCACGAAGC
GTGTTGGCGGTGACGTCACCGATTTCGCAGCGATCAAACTGATGAAGTTCGGCACGTCCTGA

Upstream 100 bases:

>100_bases
GCAAGTGTTCGAGGACGCCCGCCTGACCCTGGCGGCCCGCAAGGCCCGCTGATCTGTCGATCCCCATCAGGGGAGTAAAC
TCAACCACAAGGGATATCTC

Downstream 100 bases:

>100_bases
ACCTAAGTCATCGATCCCTTCCTGGTGCCTAAGGGCGCCGGGTGGGGTGGGGCGTGTGTGCGGGCCTTTGCGGGTCCAGC
TGCGCGTCTCTCCGCATGAG

Product: phage major capsid protein, HK97

Products: NA

Alternate protein names: HK97 Family Phage Capsid Protein; Phage Capsid Protein HK; Capsid Protein; HK97 Family Capsid Protein; Capsid Protein Of Prophage; Phage Capsid Protein; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Capsid Family; Phage Prohead Protease; Prophage; Phage Capsid Protein Gp; Capsid; Bacteriophage Protein; Phage Capsid Protein-Like Protein; Phage Prohead Protease And Phage Capsid Protein; Phage Phi-C31 Capsid; Capsid-Like Protein; Capsid C; Phage Capsid Family Protein

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MTETQDRGASSVPMAEVKTAIGGFLSEFNQFQDDMNAKFQKQEDRIAMLNTKTNTFQRPALSADVDTTAPHKLALKSYLR
CGDDDALRGLELEGKAMNTAVNAEGGYLVDPQTSEMIQSVLRSSSSLRSVANVVTVEATSFDVLIDSTDTGAGWADEVSN
TTETDTPTIERISIALHELSALPKASQRLLDDAAFDIEGWLAGRIADKFARAEAASFITGDGSGKPTGMLTHPTVDNDSW
SWGNLGYVATGTAGDFDNTNAADAIVDLVYALGARYRANANFIMNSKTAGAVRKMKDADGRFLWSDGLAAGEPARLMGYP
VLIAEDMPDIATDAMAIAFGDFGAGYTIAERPDLRVLRDPFSAKPHVLFYATKRVGGDVTDFAAIKLMKFGTS

Sequences:

>Translated_393_residues
MTETQDRGASSVPMAEVKTAIGGFLSEFNQFQDDMNAKFQKQEDRIAMLNTKTNTFQRPALSADVDTTAPHKLALKSYLR
CGDDDALRGLELEGKAMNTAVNAEGGYLVDPQTSEMIQSVLRSSSSLRSVANVVTVEATSFDVLIDSTDTGAGWADEVSN
TTETDTPTIERISIALHELSALPKASQRLLDDAAFDIEGWLAGRIADKFARAEAASFITGDGSGKPTGMLTHPTVDNDSW
SWGNLGYVATGTAGDFDNTNAADAIVDLVYALGARYRANANFIMNSKTAGAVRKMKDADGRFLWSDGLAAGEPARLMGYP
VLIAEDMPDIATDAMAIAFGDFGAGYTIAERPDLRVLRDPFSAKPHVLFYATKRVGGDVTDFAAIKLMKFGTS
>Mature_392_residues
TETQDRGASSVPMAEVKTAIGGFLSEFNQFQDDMNAKFQKQEDRIAMLNTKTNTFQRPALSADVDTTAPHKLALKSYLRC
GDDDALRGLELEGKAMNTAVNAEGGYLVDPQTSEMIQSVLRSSSSLRSVANVVTVEATSFDVLIDSTDTGAGWADEVSNT
TETDTPTIERISIALHELSALPKASQRLLDDAAFDIEGWLAGRIADKFARAEAASFITGDGSGKPTGMLTHPTVDNDSWS
WGNLGYVATGTAGDFDNTNAADAIVDLVYALGARYRANANFIMNSKTAGAVRKMKDADGRFLWSDGLAAGEPARLMGYPV
LIAEDMPDIATDAMAIAFGDFGAGYTIAERPDLRVLRDPFSAKPHVLFYATKRVGGDVTDFAAIKLMKFGTS

Specific function: Unknown

COG id: COG4653

COG function: function code R; Predicted phage phi-C31 gp36 major capsid-like protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42146; Mature: 42015

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETQDRGASSVPMAEVKTAIGGFLSEFNQFQDDMNAKFQKQEDRIAMLNTKTNTFQRPA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCCCCCC
LSADVDTTAPHKLALKSYLRCGDDDALRGLELEGKAMNTAVNAEGGYLVDPQTSEMIQSV
CCCCCCCCCCHHHHHHHHHHCCCCHHHCCEEECCCCCCEEEECCCCEEECCCHHHHHHHH
LRSSSSLRSVANVVTVEATSFDVLIDSTDTGAGWADEVSNTTETDTPTIERISIALHELS
HHCHHHHHHHHHEEEEEECEEEEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHH
ALPKASQRLLDDAAFDIEGWLAGRIADKFARAEAASFITGDGSGKPTGMLTHPTVDNDSW
HCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEECCCCCCCCC
SWGNLGYVATGTAGDFDNTNAADAIVDLVYALGARYRANANFIMNSKTAGAVRKMKDADG
CCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCEECCCCEEEECCCHHHHHHHHCCCC
RFLWSDGLAAGEPARLMGYPVLIAEDMPDIATDAMAIAFGDFGAGYTIAERPDLRVLRDP
CEEEECCCCCCCCHHHHCCEEEEECCCCCHHHHHHEEEECCCCCCCEECCCCCCHHCCCC
FSAKPHVLFYATKRVGGDVTDFAAIKLMKFGTS
CCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TETQDRGASSVPMAEVKTAIGGFLSEFNQFQDDMNAKFQKQEDRIAMLNTKTNTFQRPA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCCCCCC
LSADVDTTAPHKLALKSYLRCGDDDALRGLELEGKAMNTAVNAEGGYLVDPQTSEMIQSV
CCCCCCCCCCHHHHHHHHHHCCCCHHHCCEEECCCCCCEEEECCCCEEECCCHHHHHHHH
LRSSSSLRSVANVVTVEATSFDVLIDSTDTGAGWADEVSNTTETDTPTIERISIALHELS
HHCHHHHHHHHHEEEEEECEEEEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHH
ALPKASQRLLDDAAFDIEGWLAGRIADKFARAEAASFITGDGSGKPTGMLTHPTVDNDSW
HCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEECCCCCCCCC
SWGNLGYVATGTAGDFDNTNAADAIVDLVYALGARYRANANFIMNSKTAGAVRKMKDADG
CCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCEECCCCEEEECCCHHHHHHHHCCCC
RFLWSDGLAAGEPARLMGYPVLIAEDMPDIATDAMAIAFGDFGAGYTIAERPDLRVLRDP
CEEEECCCCCCCCHHHHCCEEEEECCCCCHHHHHHEEEECCCCCCCEECCCCCCHHCCCC
FSAKPHVLFYATKRVGGDVTDFAAIKLMKFGTS
CCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA