| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is spk1 [H]
Identifier: 89054103
GI number: 89054103
Start: 1598984
End: 1601110
Strand: Reverse
Name: spk1 [H]
Synonym: Jann_1612
Alternate gene names: 89054103
Gene position: 1601110-1598984 (Counterclockwise)
Preceding gene: 89054110
Following gene: 89054102
Centisome position: 37.08
GC content: 67.65
Gene sequence:
>2127_bases ATGTCCGACGATCCAGACAAGACCAGGATTTTGCCAGATGCCCCGGCAGGAGAGCTTCCGGTGGGCGCAGAGCTGTCCCA GGGCATGTACCGGATTACGGGCCGGATCGCGGCGGGCGGCTTCGGCATCACCTATGAGGCGCGCGACAATCTGGATCGCA AAGTCGCCATTAAAGAGTGCTTCCCGGCAGGTCTTGCCCTGCGCGCGGGCGATTTCACCGTGTCTGCGGCCAGCGCCTCC ACCGCGGAACCGTTTGAGACGGCGCGCACCCTGTTCCTGCGCGAGGCGCGGATGCTGGCCGCCCTGCGCCACCCCAATAT CGTCCATGTCCAGACGCTGTTTGAGGAAAACGGCACCGCCTACATGGCGATGGATTACGTGGACGGACGCGATTTGCAGC AGGTCATCGCCGATGAACCGGGCCTGCTGACGCCCGCCTATATCATGGAGCTGACCCGCGCCTTGTTGGCGGCGATGGAC TATCTGCACCGTGACGCGCCCGCCCGTGGTATCGGTCGCGGCAAGGAGCGGCTGCTGCACCGCGACATCAAGCCCGCCAA CATCCGCATTGATCCCTTCGATGCCCCCGTGGTGATCGATTTCGGCGCGGCCCGGCAGGAAACCAAGGCGCAATCGCGGG CCGCTGGCACCTTCCGCGTCGTGTCAGACGGCTATTCGCCCGGAGAGTTCTATGTGGCCGGGGCGGACCAAGGCCCGGCC TCCGACCTCTATTCGCTGGCGGCCACGCTTTACCATTGCATCTCAGGCGCGGCCCCTGCCCCGGCGGACGCGCGCGCGCA AAAGGTCTCCAACGGTGAAGCGGATCCCTATGAGCCCATCGCAGGCCGTTTCCCCCCCCATGATCCGCGCCTGCTGGCAT TGATCGACCGCGCCCTCGCCCGCCCGCTGAAGGATCGCCCCTCAGATGCGGCGGCCTGGCTCGCGGCAATCCCTGATACC ACGTCACAGATCCCGACGCGGATTATCACGCCGGTGGCCGATGACGGGCCCGCGCCTGCTGTTGCCAATGGCGGTGTCTG GAAGGGAGCGGCGATTGCGGGCGTGTCCGCTCTGGCCCTCATGGGCGTGGGGATCTACGCGCTGAGCGGGCCCGCAATCA CCGACGAGACATTACAAAGCGATCTGGCCGAGGCACGGGCGACCGTGGACGAAATGGAGGCGGAACTGGCCCAGTTGGCG GGCATTGCGGAGGCCTTGCAGGGCGATATCGACGCCGCAATCGACGCCCGCGACCAGGCGGACCGGCGGGCCGATGATCT GGCCGAAACGGTGCAGGACCTGCGCGCCCAATTGCGGGCGGCGAGTGCAGACGATGATGCGGAAACGCAGGCGTTGCGCG CGCAGCTGACCGAGGCGCAGGCCGGGCAAACCTCTGCGGAGACGGCGGCAGAGACCCTGACCCGACAGGTCGCCGAGCTT GAGGCGCAGATCGCGGCGCTTGGCTCTGGGGACACCGGCGCGATGGAGGCGGAGCGCACGGCCGCCCTGGCCGCCCAGGA GGTCGCCGAACGCGCCGCGTCCCGCGCCCAGGCGGATCTGCAACGCATGGCCGCGGACCTGGACGTGGCGGAGGCCGAGG CCGCGCGCCTCAGCATGGAATTGCGCACCACGCGGGCCGAGATTGACCTGATGACGGCCGGAACAACCTTGCCCAATCCC GGCCCCGCGCAACCGCCCGCCGCTGCCGCCTGCCCCACCTGGACCAGTCCGGGCGAGGAGCGGCGTTTTACCGGGACGGA AATCTACAACGCGCCCCAAACCCTGAGCACGCGTGTGGCCGGAACCACGGACCTTGGCGCTTGCGACGGCCTGCCCGAGG GGGTCGTGGGCGTGGTCACCGCGGCACCCACCTATACGCTCTACCTTTCGGAGATGGCACAGTTCGAGCGGGTGGAGATG CGGGTCAGCTCGGTCTGCGACACCACCTTGCTGGTCAACACCCAGGATACGGTCTGGCACTTCGACAATGACGGCGACGG AGGCATCCTGCCGCTCCTGAACCTGTCGGGGCAGCAGGCGATTGAGGGACGGCTGGACGTCTGGATCGGCACCGCCGACG GCACGACCTGCACGGCCGATCTGGAGCTGTCGACCTGGCTGAATTAA
Upstream 100 bases:
>100_bases AATTGCACCGAGGGGGCTGCGCGTTTACTAATTCAGCGTGGATTCGCCACATTTGAGGGGCAATGACGGCCCGGAAAACC ACCATCAGGCCGCCCATTTC
Downstream 100 bases:
>100_bases GCCGCGCCATGCCATTTGTTGCAGCCGCGCCGCCATCGCAGCGCTCTGAGCGAGGTGGGGATTTGCCCCCGTTTACAAAA GCCTGCCCCGCGCGCGAGTA
Product: serine/threonine protein kinase
Products: NA
Alternate protein names: stoPK-1 [H]
Number of amino acids: Translated: 708; Mature: 707
Protein sequence:
>708_residues MSDDPDKTRILPDAPAGELPVGAELSQGMYRITGRIAAGGFGITYEARDNLDRKVAIKECFPAGLALRAGDFTVSAASAS TAEPFETARTLFLREARMLAALRHPNIVHVQTLFEENGTAYMAMDYVDGRDLQQVIADEPGLLTPAYIMELTRALLAAMD YLHRDAPARGIGRGKERLLHRDIKPANIRIDPFDAPVVIDFGAARQETKAQSRAAGTFRVVSDGYSPGEFYVAGADQGPA SDLYSLAATLYHCISGAAPAPADARAQKVSNGEADPYEPIAGRFPPHDPRLLALIDRALARPLKDRPSDAAAWLAAIPDT TSQIPTRIITPVADDGPAPAVANGGVWKGAAIAGVSALALMGVGIYALSGPAITDETLQSDLAEARATVDEMEAELAQLA GIAEALQGDIDAAIDARDQADRRADDLAETVQDLRAQLRAASADDDAETQALRAQLTEAQAGQTSAETAAETLTRQVAEL EAQIAALGSGDTGAMEAERTAALAAQEVAERAASRAQADLQRMAADLDVAEAEAARLSMELRTTRAEIDLMTAGTTLPNP GPAQPPAAAACPTWTSPGEERRFTGTEIYNAPQTLSTRVAGTTDLGACDGLPEGVVGVVTAAPTYTLYLSEMAQFERVEM RVSSVCDTTLLVNTQDTVWHFDNDGDGGILPLLNLSGQQAIEGRLDVWIGTADGTTCTADLELSTWLN
Sequences:
>Translated_708_residues MSDDPDKTRILPDAPAGELPVGAELSQGMYRITGRIAAGGFGITYEARDNLDRKVAIKECFPAGLALRAGDFTVSAASAS TAEPFETARTLFLREARMLAALRHPNIVHVQTLFEENGTAYMAMDYVDGRDLQQVIADEPGLLTPAYIMELTRALLAAMD YLHRDAPARGIGRGKERLLHRDIKPANIRIDPFDAPVVIDFGAARQETKAQSRAAGTFRVVSDGYSPGEFYVAGADQGPA SDLYSLAATLYHCISGAAPAPADARAQKVSNGEADPYEPIAGRFPPHDPRLLALIDRALARPLKDRPSDAAAWLAAIPDT TSQIPTRIITPVADDGPAPAVANGGVWKGAAIAGVSALALMGVGIYALSGPAITDETLQSDLAEARATVDEMEAELAQLA GIAEALQGDIDAAIDARDQADRRADDLAETVQDLRAQLRAASADDDAETQALRAQLTEAQAGQTSAETAAETLTRQVAEL EAQIAALGSGDTGAMEAERTAALAAQEVAERAASRAQADLQRMAADLDVAEAEAARLSMELRTTRAEIDLMTAGTTLPNP GPAQPPAAAACPTWTSPGEERRFTGTEIYNAPQTLSTRVAGTTDLGACDGLPEGVVGVVTAAPTYTLYLSEMAQFERVEM RVSSVCDTTLLVNTQDTVWHFDNDGDGGILPLLNLSGQQAIEGRLDVWIGTADGTTCTADLELSTWLN >Mature_707_residues SDDPDKTRILPDAPAGELPVGAELSQGMYRITGRIAAGGFGITYEARDNLDRKVAIKECFPAGLALRAGDFTVSAASAST AEPFETARTLFLREARMLAALRHPNIVHVQTLFEENGTAYMAMDYVDGRDLQQVIADEPGLLTPAYIMELTRALLAAMDY LHRDAPARGIGRGKERLLHRDIKPANIRIDPFDAPVVIDFGAARQETKAQSRAAGTFRVVSDGYSPGEFYVAGADQGPAS DLYSLAATLYHCISGAAPAPADARAQKVSNGEADPYEPIAGRFPPHDPRLLALIDRALARPLKDRPSDAAAWLAAIPDTT SQIPTRIITPVADDGPAPAVANGGVWKGAAIAGVSALALMGVGIYALSGPAITDETLQSDLAEARATVDEMEAELAQLAG IAEALQGDIDAAIDARDQADRRADDLAETVQDLRAQLRAASADDDAETQALRAQLTEAQAGQTSAETAAETLTRQVAELE AQIAALGSGDTGAMEAERTAALAAQEVAERAASRAQADLQRMAADLDVAEAEAARLSMELRTTRAEIDLMTAGTTLPNPG PAQPPAAAACPTWTSPGEERRFTGTEIYNAPQTLSTRVAGTTDLGACDGLPEGVVGVVTAAPTYTLYLSEMAQFERVEMR VSSVCDTTLLVNTQDTVWHFDNDGDGGILPLLNLSGQQAIEGRLDVWIGTADGTTCTADLELSTWLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI225735561, Length=223, Percent_Identity=30.0448430493274, Blast_Score=87, Evalue=8e-17, Organism=Homo sapiens, GI41872673, Length=283, Percent_Identity=27.208480565371, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI37596297, Length=237, Percent_Identity=25.7383966244726, Blast_Score=75, Evalue=3e-13, Organism=Homo sapiens, GI217330634, Length=250, Percent_Identity=26.8, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI83367069, Length=222, Percent_Identity=24.7747747747748, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI4507281, Length=222, Percent_Identity=24.7747747747748, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI4502743, Length=230, Percent_Identity=25.6521739130435, Blast_Score=74, Evalue=6e-13, Organism=Homo sapiens, GI46852166, Length=233, Percent_Identity=26.6094420600858, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI193083129, Length=233, Percent_Identity=26.6094420600858, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI193083127, Length=233, Percent_Identity=26.6094420600858, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI193083125, Length=233, Percent_Identity=26.6094420600858, Blast_Score=72, Evalue=2e-12, Organism=Caenorhabditis elegans, GI86562808, Length=236, Percent_Identity=27.5423728813559, Blast_Score=88, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71994328, Length=225, Percent_Identity=27.1111111111111, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71988264, Length=249, Percent_Identity=26.5060240963855, Blast_Score=72, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6322710, Length=248, Percent_Identity=26.6129032258064, Blast_Score=84, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6325104, Length=187, Percent_Identity=28.8770053475936, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324805, Length=255, Percent_Identity=23.921568627451, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI45553327, Length=187, Percent_Identity=27.807486631016, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI281361563, Length=234, Percent_Identity=26.0683760683761, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI21356423, Length=234, Percent_Identity=26.0683760683761, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI45551867, Length=187, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=5e-13, Organism=Drosophila melanogaster, GI45553329, Length=187, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=5e-13, Organism=Drosophila melanogaster, GI45550727, Length=187, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR005543 - InterPro: IPR000719 - InterPro: IPR017442 - InterPro: IPR008271 [H]
Pfam domain/function: PF03793 PASTA; PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 74716; Mature: 74585
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDPDKTRILPDAPAGELPVGAELSQGMYRITGRIAAGGFGITYEARDNLDRKVAIKEC CCCCCCCCEECCCCCCCCCCCCHHHHCCCEEEHEEEEECCCEEEEHHCCCCCCEEHHHHH FPAGLALRAGDFTVSAASASTAEPFETARTLFLREARMLAALRHPNIVHVQTLFEENGTA CCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCE YMAMDYVDGRDLQQVIADEPGLLTPAYIMELTRALLAAMDYLHRDAPARGIGRGKERLLH EEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH RDIKPANIRIDPFDAPVVIDFGAARQETKAQSRAAGTFRVVSDGYSPGEFYVAGADQGPA CCCCCCCEEECCCCCCEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCH SDLYSLAATLYHCISGAAPAPADARAQKVSNGEADPYEPIAGRFPPHDPRLLALIDRALA HHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH RPLKDRPSDAAAWLAAIPDTTSQIPTRIITPVADDGPAPAVANGGVWKGAAIAGVSALAL CHHHCCCCHHHHHHHHCCCCHHHCCHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH MGVGIYALSGPAITDETLQSDLAEARATVDEMEAELAQLAGIAEALQGDIDAAIDARDQA HHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHH DRRADDLAETVQDLRAQLRAASADDDAETQALRAQLTEAQAGQTSAETAAETLTRQVAEL HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EAQIAALGSGDTGAMEAERTAALAAQEVAERAASRAQADLQRMAADLDVAEAEAARLSME HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LRTTRAEIDLMTAGTTLPNPGPAQPPAAAACPTWTSPGEERRFTGTEIYNAPQTLSTRVA HHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHCC GTTDLGACDGLPEGVVGVVTAAPTYTLYLSEMAQFERVEMRVSSVCDTTLLVNTQDTVWH CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEE FDNDGDGGILPLLNLSGQQAIEGRLDVWIGTADGTTCTADLELSTWLN ECCCCCCCEEEEECCCCCHHHCCCEEEEEECCCCCEEEEEEEHHCCCC >Mature Secondary Structure SDDPDKTRILPDAPAGELPVGAELSQGMYRITGRIAAGGFGITYEARDNLDRKVAIKEC CCCCCCCEECCCCCCCCCCCCHHHHCCCEEEHEEEEECCCEEEEHHCCCCCCEEHHHHH FPAGLALRAGDFTVSAASASTAEPFETARTLFLREARMLAALRHPNIVHVQTLFEENGTA CCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCE YMAMDYVDGRDLQQVIADEPGLLTPAYIMELTRALLAAMDYLHRDAPARGIGRGKERLLH EEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH RDIKPANIRIDPFDAPVVIDFGAARQETKAQSRAAGTFRVVSDGYSPGEFYVAGADQGPA CCCCCCCEEECCCCCCEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCH SDLYSLAATLYHCISGAAPAPADARAQKVSNGEADPYEPIAGRFPPHDPRLLALIDRALA HHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH RPLKDRPSDAAAWLAAIPDTTSQIPTRIITPVADDGPAPAVANGGVWKGAAIAGVSALAL CHHHCCCCHHHHHHHHCCCCHHHCCHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH MGVGIYALSGPAITDETLQSDLAEARATVDEMEAELAQLAGIAEALQGDIDAAIDARDQA HHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHH DRRADDLAETVQDLRAQLRAASADDDAETQALRAQLTEAQAGQTSAETAAETLTRQVAEL HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EAQIAALGSGDTGAMEAERTAALAAQEVAERAASRAQADLQRMAADLDVAEAEAARLSME HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LRTTRAEIDLMTAGTTLPNPGPAQPPAAAACPTWTSPGEERRFTGTEIYNAPQTLSTRVA HHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHCC GTTDLGACDGLPEGVVGVVTAAPTYTLYLSEMAQFERVEMRVSSVCDTTLLVNTQDTVWH CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEE FDNDGDGGILPLLNLSGQQAIEGRLDVWIGTADGTTCTADLELSTWLN ECCCCCCCEEEEECCCCCHHHCCCEEEEEECCCCCEEEEEEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA