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The map label for this gene is yliI [H]

Identifier: 89054110

GI number: 89054110

Start: 1607597

End: 1608811

Strand: Reverse

Name: yliI [H]

Synonym: Jann_1619

Alternate gene names: 89054110

Gene position: 1608811-1607597 (Counterclockwise)

Preceding gene: 89054111

Following gene: 89054103

Centisome position: 37.26

GC content: 66.26

Gene sequence:

>1215_bases
ATGCTTCGCATTTCGCCCGCTCTCTCTCTCAGTCCGCTCCTCGCTGTGCTCCTCGCCGGGGCCTCTTTGGCGCAAGCCCC
CGTTGACGACGGCACGGCAAATTTGCCCGATACCATCCCCGCCTTCGAAGGCCAGACAGACGCGCCAGAGATCAACTCAG
GCGCGACCTTCGACGAAGAGGTCATCACCGGCGCGCTGTCCCGGCCCTGGGGCCTTGCCGTGTTGCCCGACGGCGCGGGC
TACATCGTGACCGAACGGGGCGGCACCCTGCGGCACATCACCCGCGATGGCACCATGGGCCCCGAAATATCCGGCGTGCC
GAACGTGCGTGCGATGCGCCAGGGCGGTCTGCTTGATGTGACCCTTGCCCCTGATTTCGACGACAGCCGTATCTTGTATC
TGACCTACGCCGCGCGCGATGGGCTGGCCGGGTCCGCCACCGCCCTGGCCCGCGCCACCCTGTCCGACGATCACACCGCA
CTGGAGCAGGTGACAGAGCTCTGGCGACAAACCCCGGCCTCCGCCATCCCCGCCCATTTCGGCAGTCGGGTGATCGTTCA
GCCCGACGGTGGGCTGATCGTGACCACCGGGGACCGCTTCACCTCGGAAAACCGCCAGTTGGCCCAAGATCCCGTCAACG
CCGCCTACGGGGTTGTCGTGGGGTTCCTGCCCGATGGGTCTCCCACCGCCAACGACGCCCTTCGCGACGTCTTGCCCGGC
ATCGTCAGCTACGGACACCGCAATAGTCAGGGCGCTGCCATCCAGCCCGGCACCGATCTGTTATGGACCCTCGAACACGG
TCCTGCGGGCGGCGACGAGCTTAACATTATCGAAGAGGGCGGCAATTACGGCTGGCCCATGGTCAGCTACGGGGTGAATT
ACAACGGCTCTGATGTGGGCAGTGGCGAACAGGCCCATGCCCCCGATTTCATTGAACCCCGCTACTTCTGGGACCCGTCC
ATCGCGCCGTCGGACATGGTGTTCTACGACGGCGACATGTTCCCGGACTGGCAGGGCGATATCCTCCTGGGTGCGCTGGC
CGGGCAGGCCCTTGTGCGGCTGGATATCGACGGGACCTCCGTCATCGGGGAGGAGCGGTTCCGCACCGGAGAGGGCCGCG
TGCGCGATGTGGAACTCGACGCCGACGGCGCGATCCTGATCCTGATCGACGATGATCCGGGCGCGCTGATCCGGCTGACG
CCCGCTGCGGGCTAG

Upstream 100 bases:

>100_bases
AGGACTAAAATCCGCCGGTCCTGACGGATCACGAAAAAATGGGCCGTCTCCTTGCGGGGGCGGCCTATTTCTATGGAAAC
GTCGCAACATGAGGTCCTCC

Downstream 100 bases:

>100_bases
CTTGCGCTTCGGCTGGCGCGCAGGGCGAACAGCCCCGCCGCCCCCAGGCACGCCGCTCCGATCCGGTTGATCAACCGCAG
GACGAAAGGCCCACGCAGAC

Product: glucose sorbosone dehydrogenase

Products: NA

Alternate protein names: Asd [H]

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MLRISPALSLSPLLAVLLAGASLAQAPVDDGTANLPDTIPAFEGQTDAPEINSGATFDEEVITGALSRPWGLAVLPDGAG
YIVTERGGTLRHITRDGTMGPEISGVPNVRAMRQGGLLDVTLAPDFDDSRILYLTYAARDGLAGSATALARATLSDDHTA
LEQVTELWRQTPASAIPAHFGSRVIVQPDGGLIVTTGDRFTSENRQLAQDPVNAAYGVVVGFLPDGSPTANDALRDVLPG
IVSYGHRNSQGAAIQPGTDLLWTLEHGPAGGDELNIIEEGGNYGWPMVSYGVNYNGSDVGSGEQAHAPDFIEPRYFWDPS
IAPSDMVFYDGDMFPDWQGDILLGALAGQALVRLDIDGTSVIGEERFRTGEGRVRDVELDADGAILILIDDDPGALIRLT
PAAG

Sequences:

>Translated_404_residues
MLRISPALSLSPLLAVLLAGASLAQAPVDDGTANLPDTIPAFEGQTDAPEINSGATFDEEVITGALSRPWGLAVLPDGAG
YIVTERGGTLRHITRDGTMGPEISGVPNVRAMRQGGLLDVTLAPDFDDSRILYLTYAARDGLAGSATALARATLSDDHTA
LEQVTELWRQTPASAIPAHFGSRVIVQPDGGLIVTTGDRFTSENRQLAQDPVNAAYGVVVGFLPDGSPTANDALRDVLPG
IVSYGHRNSQGAAIQPGTDLLWTLEHGPAGGDELNIIEEGGNYGWPMVSYGVNYNGSDVGSGEQAHAPDFIEPRYFWDPS
IAPSDMVFYDGDMFPDWQGDILLGALAGQALVRLDIDGTSVIGEERFRTGEGRVRDVELDADGAILILIDDDPGALIRLT
PAAG
>Mature_404_residues
MLRISPALSLSPLLAVLLAGASLAQAPVDDGTANLPDTIPAFEGQTDAPEINSGATFDEEVITGALSRPWGLAVLPDGAG
YIVTERGGTLRHITRDGTMGPEISGVPNVRAMRQGGLLDVTLAPDFDDSRILYLTYAARDGLAGSATALARATLSDDHTA
LEQVTELWRQTPASAIPAHFGSRVIVQPDGGLIVTTGDRFTSENRQLAQDPVNAAYGVVVGFLPDGSPTANDALRDVLPG
IVSYGHRNSQGAAIQPGTDLLWTLEHGPAGGDELNIIEEGGNYGWPMVSYGVNYNGSDVGSGEQAHAPDFIEPRYFWDPS
IAPSDMVFYDGDMFPDWQGDILLGALAGQALVRLDIDGTSVIGEERFRTGEGRVRDVELDADGAILILIDDDPGALIRLT
PAAG

Specific function: Aldose sugar dehydrogenase with broad substrate specificity. The physiological substrate is unknown. Can oxidize glucose to gluconolactone. Can also utilize D-arabinose, L- arabinose and 2-deoxy-glucose. Has higher activity towards oligomeric sugars, such

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Escherichia coli, GI1787060, Length=355, Percent_Identity=38.3098591549296, Blast_Score=236, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 42539; Mature: 42539

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRISPALSLSPLLAVLLAGASLAQAPVDDGTANLPDTIPAFEGQTDAPEINSGATFDEE
CEEECCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
VITGALSRPWGLAVLPDGAGYIVTERGGTLRHITRDGTMGPEISGVPNVRAMRQGGLLDV
HHHHHHCCCCCEEEECCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCEEEE
TLAPDFDDSRILYLTYAARDGLAGSATALARATLSDDHTALEQVTELWRQTPASAIPAHF
EECCCCCCCEEEEEEEECCCCCCCCHHHHEEECCCCCHHHHHHHHHHHHHCCCHHHHHHH
GSRVIVQPDGGLIVTTGDRFTSENRQLAQDPVNAAYGVVVGFLPDGSPTANDALRDVLPG
CCEEEECCCCCEEEEECCCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHH
IVSYGHRNSQGAAIQPGTDLLWTLEHGPAGGDELNIIEEGGNYGWPMVSYGVNYNGSDVG
HHHCCCCCCCCCEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCC
SGEQAHAPDFIEPRYFWDPSIAPSDMVFYDGDMFPDWQGDILLGALAGQALVRLDIDGTS
CCCCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCE
VIGEERFRTGEGRVRDVELDADGAILILIDDDPGALIRLTPAAG
ECCHHHEECCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCC
>Mature Secondary Structure
MLRISPALSLSPLLAVLLAGASLAQAPVDDGTANLPDTIPAFEGQTDAPEINSGATFDEE
CEEECCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
VITGALSRPWGLAVLPDGAGYIVTERGGTLRHITRDGTMGPEISGVPNVRAMRQGGLLDV
HHHHHHCCCCCEEEECCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCEEEE
TLAPDFDDSRILYLTYAARDGLAGSATALARATLSDDHTALEQVTELWRQTPASAIPAHF
EECCCCCCCEEEEEEEECCCCCCCCHHHHEEECCCCCHHHHHHHHHHHHHCCCHHHHHHH
GSRVIVQPDGGLIVTTGDRFTSENRQLAQDPVNAAYGVVVGFLPDGSPTANDALRDVLPG
CCEEEECCCCCEEEEECCCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHH
IVSYGHRNSQGAAIQPGTDLLWTLEHGPAGGDELNIIEEGGNYGWPMVSYGVNYNGSDVG
HHHCCCCCCCCCEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCC
SGEQAHAPDFIEPRYFWDPSIAPSDMVFYDGDMFPDWQGDILLGALAGQALVRLDIDGTS
CCCCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCE
VIGEERFRTGEGRVRDVELDADGAILILIDDDPGALIRLTPAAG
ECCHHHEECCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]