| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054093
Identifier: 89054093
GI number: 89054093
Start: 1585309
End: 1586280
Strand: Direct
Name: 89054093
Synonym: Jann_1602
Alternate gene names: NA
Gene position: 1585309-1586280 (Clockwise)
Preceding gene: 89054092
Following gene: 89054094
Centisome position: 36.71
GC content: 62.14
Gene sequence:
>972_bases ATGAGAATTGACGGGCTTCAGTATTGTAATTGGTCACGCCGCATCTTTCAGGAGATGCGGGACGGCGGGCTGGATGCGGT CCATGTGACCATCGCCTACCACGAGGTTTTCCGCGAGACGGTTTTGCAGATGGAGCGTTGGAACCGGTACTTTGAGGACC ATGGCGATCTGATCGTGCATGCCCACACCGCGGCGGATGTGGCGGCGGCCAGGGCGGCGGGAAAAACGGCGATCATCTTT GGTGCGCAGAACCCGTCCCCGATTGAAGATGACATCGGCCTCGTGCAGATCCTCCACGCCCTTGGCCTGCGCTTCATGCA GCTGACCTACAACAACCAATCGCTGTTAGCGACCGGGTGTTATGAGGCGGAAGATCCGGGCCTGACCCGCATGGGCCGCG AGGTCATCGCGGAGATGAATCGCGTGGGTCTGGTGGTGGACATGTCGCATTCCGCCGACCGCTCCACCATCGATGCGGCG GAGCATTCCACCCGCCCAATCGCCATCACCCACGCCAACCCGCATAGCTGGCATCCCGCCCGTCGCAACAAGCGCGCGGA GGTCATTGAGGCGGTGGTCGCAGGCGGCGGCATGATGGGATTTTCCCTCTACCCCCATCACCTTGAGGGCGGCAGCGCCT GCACGCTCGACAGCTTCTGCGGCATGATGATGGATATGGCCGCGCGCTACGGCGTCCAGCATTTCGGTATCGGCAGTGAC CTGTGCCAGGACCAGCCCGACAGCGTCGTGGAATGGATGCGTGTGGGGCGGTGGACCAAGCAGATCGACTATGGCGAAGG CTCCAAGGACAACGCGGGCTTCCCGCCGCAGCCCGATTGGTTCCGCACCAACGCCGATTTCCCGAACCTCGCAACGGGCC TTGCCGCCGTGGGCTTTGACGGTGACGGGATAGATGCGCTTCTGGGCCAGAACTGGTATACGTTCTTCGACAAGAACTTT GGGCCGGCATGA
Upstream 100 bases:
>100_bases GGCCGAGGGGTTTCACGCAACGCCCACCCACCCACCCCGTCGCGCGAAACCCCTCTTGCGTTCTTGACGCAACGTTGCGC GCGGGGTTCAGGTAGCCGCC
Downstream 100 bases:
>100_bases TGCAACCTGACCCCCAACAGATTCCCCTGCGCGATCCGCAGGAGGTCATGACACTGGCGCGCATGGGCTCCATGCATCAG TCGCGCTTGTCGTTTATGCG
Product: peptidase M19, renal dipeptidase
Products: NA
Alternate protein names: Dipeptidase; Peptidase; Renal Dipeptidase Family Protein; Microsomal Dipeptidase; Glutamine Amidotransferase Class II/Dipeptidase; Zn-Dependent Dipeptidase Microsomal Dipeptidase; Zn-Dependent Dipeptidase; Glutamine Amidotransferase; M19 Family Peptidase; Dipeptidase Protein; Thermostable Dipeptidase; Renal Dipeptidase; Renal Dipeptidase Superfamily; Multidrug Resistance Protein B; Membrane Dipeptidase Family; Renal Dipeptidase Superfamily Protein; Amma-Glutamyl Hydrolase Family Peptidase; Membrane Dipeptidase Protein; Microsomal Dipeptidase Like Protein; Dipeptidase Bdp; Membrane-Bound Dipeptidase; Microsomal Dipeptidase-Like Protein; M19 Family Membrane Dipeptidase; Periplasmic Dipeptidase; LOW QUALITY PROTEIN Dipeptidase; Dipeptidase Family Protein
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MRIDGLQYCNWSRRIFQEMRDGGLDAVHVTIAYHEVFRETVLQMERWNRYFEDHGDLIVHAHTAADVAAARAAGKTAIIF GAQNPSPIEDDIGLVQILHALGLRFMQLTYNNQSLLATGCYEAEDPGLTRMGREVIAEMNRVGLVVDMSHSADRSTIDAA EHSTRPIAITHANPHSWHPARRNKRAEVIEAVVAGGGMMGFSLYPHHLEGGSACTLDSFCGMMMDMAARYGVQHFGIGSD LCQDQPDSVVEWMRVGRWTKQIDYGEGSKDNAGFPPQPDWFRTNADFPNLATGLAAVGFDGDGIDALLGQNWYTFFDKNF GPA
Sequences:
>Translated_323_residues MRIDGLQYCNWSRRIFQEMRDGGLDAVHVTIAYHEVFRETVLQMERWNRYFEDHGDLIVHAHTAADVAAARAAGKTAIIF GAQNPSPIEDDIGLVQILHALGLRFMQLTYNNQSLLATGCYEAEDPGLTRMGREVIAEMNRVGLVVDMSHSADRSTIDAA EHSTRPIAITHANPHSWHPARRNKRAEVIEAVVAGGGMMGFSLYPHHLEGGSACTLDSFCGMMMDMAARYGVQHFGIGSD LCQDQPDSVVEWMRVGRWTKQIDYGEGSKDNAGFPPQPDWFRTNADFPNLATGLAAVGFDGDGIDALLGQNWYTFFDKNF GPA >Mature_323_residues MRIDGLQYCNWSRRIFQEMRDGGLDAVHVTIAYHEVFRETVLQMERWNRYFEDHGDLIVHAHTAADVAAARAAGKTAIIF GAQNPSPIEDDIGLVQILHALGLRFMQLTYNNQSLLATGCYEAEDPGLTRMGREVIAEMNRVGLVVDMSHSADRSTIDAA EHSTRPIAITHANPHSWHPARRNKRAEVIEAVVAGGGMMGFSLYPHHLEGGSACTLDSFCGMMMDMAARYGVQHFGIGSD LCQDQPDSVVEWMRVGRWTKQIDYGEGSKDNAGFPPQPDWFRTNADFPNLATGLAAVGFDGDGIDALLGQNWYTFFDKNF GPA
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI189458885, Length=244, Percent_Identity=22.1311475409836, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI4758190, Length=244, Percent_Identity=22.1311475409836, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI11641269, Length=247, Percent_Identity=21.8623481781377, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI281362638, Length=223, Percent_Identity=26.0089686098655, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI281362636, Length=223, Percent_Identity=26.0089686098655, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI161083233, Length=229, Percent_Identity=24.4541484716157, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI221475880, Length=243, Percent_Identity=22.6337448559671, Blast_Score=83, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35779; Mature: 35779
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIDGLQYCNWSRRIFQEMRDGGLDAVHVTIAYHEVFRETVLQMERWNRYFEDHGDLIVH CCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE AHTAADVAAARAAGKTAIIFGAQNPSPIEDDIGLVQILHALGLRFMQLTYNNQSLLATGC ECCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCEEEEECC YEAEDPGLTRMGREVIAEMNRVGLVVDMSHSADRSTIDAAEHSTRPIAITHANPHSWHPA CCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCH RRNKRAEVIEAVVAGGGMMGFSLYPHHLEGGSACTLDSFCGMMMDMAARYGVQHFGIGSD HHCHHHHHHHHHHHCCCEEECCCCCCCCCCCCEECHHHHHHHHHHHHHHHCCHHCCCCHH LCQDQPDSVVEWMRVGRWTKQIDYGEGSKDNAGFPPQPDWFRTNADFPNLATGLAAVGFD HHCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHEEECCC GDGIDALLGQNWYTFFDKNFGPA CCCHHHHHCCCCEEEECCCCCCC >Mature Secondary Structure MRIDGLQYCNWSRRIFQEMRDGGLDAVHVTIAYHEVFRETVLQMERWNRYFEDHGDLIVH CCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE AHTAADVAAARAAGKTAIIFGAQNPSPIEDDIGLVQILHALGLRFMQLTYNNQSLLATGC ECCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCEEEEECC YEAEDPGLTRMGREVIAEMNRVGLVVDMSHSADRSTIDAAEHSTRPIAITHANPHSWHPA CCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCH RRNKRAEVIEAVVAGGGMMGFSLYPHHLEGGSACTLDSFCGMMMDMAARYGVQHFGIGSD HHCHHHHHHHHHHHCCCEEECCCCCCCCCCCCEECHHHHHHHHHHHHHHHCCHHCCCCHH LCQDQPDSVVEWMRVGRWTKQIDYGEGSKDNAGFPPQPDWFRTNADFPNLATGLAAVGFD HHCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHEEECCC GDGIDALLGQNWYTFFDKNFGPA CCCHHHHHCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA