| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054094
Identifier: 89054094
GI number: 89054094
Start: 1586277
End: 1587962
Strand: Direct
Name: 89054094
Synonym: Jann_1603
Alternate gene names: NA
Gene position: 1586277-1587962 (Clockwise)
Preceding gene: 89054093
Following gene: 89054095
Centisome position: 36.74
GC content: 64.35
Gene sequence:
>1686_bases ATGATGCAACCTGACCCCCAACAGATTCCCCTGCGCGATCCGCAGGAGGTCATGACACTGGCGCGCATGGGCTCCATGCA TCAGTCGCGCTTGTCGTTTATGCGGGTGCTGTTGCGGCGGATGAAGGGGGAGGGGTGGCAATTCTTCCGGCCGGACTGGT CGGTGAATGGGCGGGGTGAGGGCCATGCCGTCTACACCGCCAAGGGGCCGGAGCGGGCGTATTCGCTGATCGCCTTCGCC CATGACCTGCCCGCAGAGATGCGCAGTGACCGGGTCATTGCGACGGCGTGGGATGCCACGTTTGTTCTGTTCGATGGCGT GCCGACGAATGATGAGATCGACGTCCTGCGGGCCAATGTGCCGAAACAGGAAGCCGGTCGCGTGTCGTCGAGCGTGCTGA CGCTCAGCCGTGCCAACCGCTCGGTCCGGCTGTGGGATCATGTGGTCGCGTGCCTCGTCAAGGGGCAACAGCCCGACCCC GAGAAGATCTCTGATGTCGGCTATCTGATGCGGACCACTGCCGTCTATGGCTCTGCCAAATTCGGGGCGGCCGACCGCGC GGTGATTGAGGCGCGGCGCGAGTTGAGCGCACCGTTTCAGGCGGAGATGTTGACTGTCTACCTGATCCGCACCTTCGTCA TGGATCTGGTGGAGCATCTGGCGCGGGCGGTGAACCCAGCCGCCGCGCGCCTTGATCCGTCCCTCAAGCGGCGCTTCGGG ATCGGCAATTCCACCGGCCTCGGGATGGCCCCGTTTCTGGTGAACCACCCCAAGCTGATCCACAATTGGATGGCGGCGCG GGAATGGGCGCTGGCGCAGGTCCGCGGGCTTGACCGTGCCAGCATCGAGGAGGTCAAGACCTTCAAATCCTTCGCAAAAC GCGCCGCGTGCAATGCCACGCAATGGCAGTCGTCCCATCCGATCCAGCAAGCCAAGCTGGCCGAGTTGCGGGCCGATATG ACGGCGCTTCTGACACGGCTTGATGGGTTTGACTTCGCCACGCATCGCCCCTGGGACGTCCTTTGGCGCTGGGGAGAGAC GCATTTGGGACTTGAGGGGCAGGAGCAACTGGCCTCTCTCCTGCTGGAGCCTTACGGGCCGCTCATTGACACTGCGGCGG GCGGCATGGCGGCGGATGAGACGCCCAAGCCAATCGACGGTCGCATGGATACAAGCGCCATGAGAACCCTGATCGAACGC ATCCACCCCCGCGCGCTGGAGACGGATTGGGACGCGCCCGAGGCCTGTGCGCGGGTCTGGTACACCTCCGCCGAGAAGCT GGAGCCGCGATTGGGCGAACGGGCGGAAGAAGACCTGGACGCCTACGCCAATGCCCTTTGTCCGGCCCATGATGCGGCGA AGCTTTACGCGGCGCTGGACGGGGAAACCGGCCCCATCGCGGCCTTCCTGCTGCACGCGCCGGAACATCGCCACACCGTC CGTCGTCTGCAATTGGCCGCGACCCACGCCTATGCCGAGATCCGCGATAATACGACCCACGCAGAGATGGCCCCCATCGA CCTGCTGCGCGCCAAGCTGAGTTTTTTCGGTGCAACCCGGTTTGACCCGAGATCAGACCGCTGGCTGCGCATCACCATGT TTCAGAACGCGCCCTACCCGGAAGACCTGGCCCAGGTCGACCCCGATGGCTGGAGTTACCCTTCGTTGAACGAGGTCGGG GCATGA
Upstream 100 bases:
>100_bases TCGCAACGGGCCTTGCCGCCGTGGGCTTTGACGGTGACGGGATAGATGCGCTTCTGGGCCAGAACTGGTATACGTTCTTC GACAAGAACTTTGGGCCGGC
Downstream 100 bases:
>100_bases TTGTGCAGGCAGGCGACGATTGGTCATTGGGAGAGGTGCAATCGCTCTGCGTGAAGGCGGCGCGCGGGGCCGGGCGTGCG GTTGGTCTGGCCGAAGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 561; Mature: 561
Protein sequence:
>561_residues MMQPDPQQIPLRDPQEVMTLARMGSMHQSRLSFMRVLLRRMKGEGWQFFRPDWSVNGRGEGHAVYTAKGPERAYSLIAFA HDLPAEMRSDRVIATAWDATFVLFDGVPTNDEIDVLRANVPKQEAGRVSSSVLTLSRANRSVRLWDHVVACLVKGQQPDP EKISDVGYLMRTTAVYGSAKFGAADRAVIEARRELSAPFQAEMLTVYLIRTFVMDLVEHLARAVNPAAARLDPSLKRRFG IGNSTGLGMAPFLVNHPKLIHNWMAAREWALAQVRGLDRASIEEVKTFKSFAKRAACNATQWQSSHPIQQAKLAELRADM TALLTRLDGFDFATHRPWDVLWRWGETHLGLEGQEQLASLLLEPYGPLIDTAAGGMAADETPKPIDGRMDTSAMRTLIER IHPRALETDWDAPEACARVWYTSAEKLEPRLGERAEEDLDAYANALCPAHDAAKLYAALDGETGPIAAFLLHAPEHRHTV RRLQLAATHAYAEIRDNTTHAEMAPIDLLRAKLSFFGATRFDPRSDRWLRITMFQNAPYPEDLAQVDPDGWSYPSLNEVG A
Sequences:
>Translated_561_residues MMQPDPQQIPLRDPQEVMTLARMGSMHQSRLSFMRVLLRRMKGEGWQFFRPDWSVNGRGEGHAVYTAKGPERAYSLIAFA HDLPAEMRSDRVIATAWDATFVLFDGVPTNDEIDVLRANVPKQEAGRVSSSVLTLSRANRSVRLWDHVVACLVKGQQPDP EKISDVGYLMRTTAVYGSAKFGAADRAVIEARRELSAPFQAEMLTVYLIRTFVMDLVEHLARAVNPAAARLDPSLKRRFG IGNSTGLGMAPFLVNHPKLIHNWMAAREWALAQVRGLDRASIEEVKTFKSFAKRAACNATQWQSSHPIQQAKLAELRADM TALLTRLDGFDFATHRPWDVLWRWGETHLGLEGQEQLASLLLEPYGPLIDTAAGGMAADETPKPIDGRMDTSAMRTLIER IHPRALETDWDAPEACARVWYTSAEKLEPRLGERAEEDLDAYANALCPAHDAAKLYAALDGETGPIAAFLLHAPEHRHTV RRLQLAATHAYAEIRDNTTHAEMAPIDLLRAKLSFFGATRFDPRSDRWLRITMFQNAPYPEDLAQVDPDGWSYPSLNEVG A >Mature_561_residues MMQPDPQQIPLRDPQEVMTLARMGSMHQSRLSFMRVLLRRMKGEGWQFFRPDWSVNGRGEGHAVYTAKGPERAYSLIAFA HDLPAEMRSDRVIATAWDATFVLFDGVPTNDEIDVLRANVPKQEAGRVSSSVLTLSRANRSVRLWDHVVACLVKGQQPDP EKISDVGYLMRTTAVYGSAKFGAADRAVIEARRELSAPFQAEMLTVYLIRTFVMDLVEHLARAVNPAAARLDPSLKRRFG IGNSTGLGMAPFLVNHPKLIHNWMAAREWALAQVRGLDRASIEEVKTFKSFAKRAACNATQWQSSHPIQQAKLAELRADM TALLTRLDGFDFATHRPWDVLWRWGETHLGLEGQEQLASLLLEPYGPLIDTAAGGMAADETPKPIDGRMDTSAMRTLIER IHPRALETDWDAPEACARVWYTSAEKLEPRLGERAEEDLDAYANALCPAHDAAKLYAALDGETGPIAAFLLHAPEHRHTV RRLQLAATHAYAEIRDNTTHAEMAPIDLLRAKLSFFGATRFDPRSDRWLRITMFQNAPYPEDLAQVDPDGWSYPSLNEVG A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62779; Mature: 62779
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQPDPQQIPLRDPQEVMTLARMGSMHQSRLSFMRVLLRRMKGEGWQFFRPDWSVNGRGE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC GHAVYTAKGPERAYSLIAFAHDLPAEMRSDRVIATAWDATFVLFDGVPTNDEIDVLRANV CCEEEECCCHHHHHHHHHHHHHCCHHHCCCCEEEEECCEEEEEECCCCCCCCCEEEECCC PKQEAGRVSSSVLTLSRANRSVRLWDHVVACLVKGQQPDPEKISDVGYLMRTTAVYGSAK CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC FGAADRAVIEARRELSAPFQAEMLTVYLIRTFVMDLVEHLARAVNPAAARLDPSLKRRFG CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHCC IGNSTGLGMAPFLVNHPKLIHNWMAAREWALAQVRGLDRASIEEVKTFKSFAKRAACNAT CCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCH QWQSSHPIQQAKLAELRADMTALLTRLDGFDFATHRPWDVLWRWGETHLGLEGQEQLASL HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHH LLEPYGPLIDTAAGGMAADETPKPIDGRMDTSAMRTLIERIHPRALETDWDAPEACARVW HHHCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH YTSAEKLEPRLGERAEEDLDAYANALCPAHDAAKLYAALDGETGPIAAFLLHAPEHRHTV HCCHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHH RRLQLAATHAYAEIRDNTTHAEMAPIDLLRAKLSFFGATRFDPRSDRWLRITMFQNAPYP HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCC EDLAQVDPDGWSYPSLNEVGA HHHHHCCCCCCCCCCHHHCCC >Mature Secondary Structure MMQPDPQQIPLRDPQEVMTLARMGSMHQSRLSFMRVLLRRMKGEGWQFFRPDWSVNGRGE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC GHAVYTAKGPERAYSLIAFAHDLPAEMRSDRVIATAWDATFVLFDGVPTNDEIDVLRANV CCEEEECCCHHHHHHHHHHHHHCCHHHCCCCEEEEECCEEEEEECCCCCCCCCEEEECCC PKQEAGRVSSSVLTLSRANRSVRLWDHVVACLVKGQQPDPEKISDVGYLMRTTAVYGSAK CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC FGAADRAVIEARRELSAPFQAEMLTVYLIRTFVMDLVEHLARAVNPAAARLDPSLKRRFG CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHCC IGNSTGLGMAPFLVNHPKLIHNWMAAREWALAQVRGLDRASIEEVKTFKSFAKRAACNAT CCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCH QWQSSHPIQQAKLAELRADMTALLTRLDGFDFATHRPWDVLWRWGETHLGLEGQEQLASL HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHH LLEPYGPLIDTAAGGMAADETPKPIDGRMDTSAMRTLIERIHPRALETDWDAPEACARVW HHHCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH YTSAEKLEPRLGERAEEDLDAYANALCPAHDAAKLYAALDGETGPIAAFLLHAPEHRHTV HCCHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHH RRLQLAATHAYAEIRDNTTHAEMAPIDLLRAKLSFFGATRFDPRSDRWLRITMFQNAPYP HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCC EDLAQVDPDGWSYPSLNEVGA HHHHHCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA