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The map label for this gene is pcaC [H]

Identifier: 89054083

GI number: 89054083

Start: 1573664

End: 1574041

Strand: Reverse

Name: pcaC [H]

Synonym: Jann_1592

Alternate gene names: 89054083

Gene position: 1574041-1573664 (Counterclockwise)

Preceding gene: 89054084

Following gene: 89054082

Centisome position: 36.45

GC content: 63.49

Gene sequence:

>378_bases
ATGGACGATTTTTTCAAACTGGGATTAGAGCAGCGCAAAGCCACCCTGGGCGCGGAGTATGTGGAGGCCAACCTGGCCGC
AGCCGACGATTTCACCCGTCCCTTTCAGGAGGCGATGACCGCCTGGTGCTGGGGCTTTGGTTGGGGCGACGACGCGATTG
ACGCCAAGACCCGCTCGATGATGAACCTGACGATGCTGGGGGCCCTGGGCCGCATGTCCGAATGGAAAACCCACTGTCGC
GGCGCGCTGACCAACGGCGTCACCAAGGACGAATTGCGCGCCATCATCCACGCCGTGGGCATCTATTGCGGCGTGCCGAT
GGCGCTGGAATGCTTCCGCGTGGCCCGCCGCGTGCTGGAGGAGGCGGGCGAATTGTGA

Upstream 100 bases:

>100_bases
ATTGACACCGTCCCTGCCGAGTAACCTCGTCACATGCTAAACCAGACGGGCCGCACCTCATCGTGCGGCCCGTTTTTTCT
TGTCAGGACCGGAGGTCGCA

Downstream 100 bases:

>100_bases
CGCTGCGTCAAACCGCAGGAGGGTCATTTACAAATAAATGAACATCGTTCATGAATGCGTGGAGATCTGTTGAGAGGATG
ACGCGATGAGCCGTCTGGGA

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MDDFFKLGLEQRKATLGAEYVEANLAAADDFTRPFQEAMTAWCWGFGWGDDAIDAKTRSMMNLTMLGALGRMSEWKTHCR
GALTNGVTKDELRAIIHAVGIYCGVPMALECFRVARRVLEEAGEL

Sequences:

>Translated_125_residues
MDDFFKLGLEQRKATLGAEYVEANLAAADDFTRPFQEAMTAWCWGFGWGDDAIDAKTRSMMNLTMLGALGRMSEWKTHCR
GALTNGVTKDELRAIIHAVGIYCGVPMALECFRVARRVLEEAGEL
>Mature_125_residues
MDDFFKLGLEQRKATLGAEYVEANLAAADDFTRPFQEAMTAWCWGFGWGDDAIDAKTRSMMNLTMLGALGRMSEWKTHCR
GALTNGVTKDELRAIIHAVGIYCGVPMALECFRVARRVLEEAGEL

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 13910; Mature: 13910

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDFFKLGLEQRKATLGAEYVEANLAAADDFTRPFQEAMTAWCWGFGWGDDAIDAKTRSM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
MNLTMLGALGRMSEWKTHCRGALTNGVTKDELRAIIHAVGIYCGVPMALECFRVARRVLE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EAGEL
HHCCC
>Mature Secondary Structure
MDDFFKLGLEQRKATLGAEYVEANLAAADDFTRPFQEAMTAWCWGFGWGDDAIDAKTRSM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
MNLTMLGALGRMSEWKTHCRGALTNGVTKDELRAIIHAVGIYCGVPMALECFRVARRVLE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EAGEL
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]