Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054044

Identifier: 89054044

GI number: 89054044

Start: 1523829

End: 1524350

Strand: Direct

Name: 89054044

Synonym: Jann_1553

Alternate gene names: NA

Gene position: 1523829-1524350 (Clockwise)

Preceding gene: 89054042

Following gene: 89054045

Centisome position: 35.29

GC content: 61.49

Gene sequence:

>522_bases
ATGGAACTGACGATCACACGCACCATCGACGCCCCGCTTGATAAGGTCTGGGACATTGTCGGGCCGAACTACACATCGGC
CGGCGATTGGGCCAGTTCGGTCTACGTGTCTGGCGCCCGCGCCGGCACGCCCAAGGTTGCCAGCGCACCGGCTGCCGGCC
GCGTTTGCGAGACGTCGCTCGGGCCCTTCACCGAGACGATCGAGGCCTATGACGCCGACAGGCACACGGTCTCCTACTCT
GCCGGGGGGGAAAAGATGCCCGGTTTCATGAAAGGTCTGCGCAACACCTGGAACCTGACGCAAAGCGGCAACGGCACCAA
AGCCAGCATGACCCTGCGCGCCGACATCGCATTTCCCATGAATATCCTCATGGGCTGGATGATGAAGATGCAGTTCAAAA
AAGCGCTGAACGAGACCATCGATGACCTCAAGGTCTACGCCGAAACTGGCCGTCCGTCGCCGCGCAAGGTCAAGGTCGAT
GCCTCCAAAAAGGCCATCGCTGCGCGGCACTCCATGGCCTGA

Upstream 100 bases:

>100_bases
GACATCCGGCAAGGGCGACATCAAACAATTCATCAACGTGCACATCGAAGAAACCGCCGAAGGTGGTTACGCGATGGGCG
GTCAAGTGGTGGGTTGATCC

Downstream 100 bases:

>100_bases
CGACACCCATTTCTCAAAATACTCGATAAGGAAAATACAATGAAATATGCACTTTCGCTCGCCCTCGCTTTGGCCGTTTC
AACGATGGCCCAAGCGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MELTITRTIDAPLDKVWDIVGPNYTSAGDWASSVYVSGARAGTPKVASAPAAGRVCETSLGPFTETIEAYDADRHTVSYS
AGGEKMPGFMKGLRNTWNLTQSGNGTKASMTLRADIAFPMNILMGWMMKMQFKKALNETIDDLKVYAETGRPSPRKVKVD
ASKKAIAARHSMA

Sequences:

>Translated_173_residues
MELTITRTIDAPLDKVWDIVGPNYTSAGDWASSVYVSGARAGTPKVASAPAAGRVCETSLGPFTETIEAYDADRHTVSYS
AGGEKMPGFMKGLRNTWNLTQSGNGTKASMTLRADIAFPMNILMGWMMKMQFKKALNETIDDLKVYAETGRPSPRKVKVD
ASKKAIAARHSMA
>Mature_173_residues
MELTITRTIDAPLDKVWDIVGPNYTSAGDWASSVYVSGARAGTPKVASAPAAGRVCETSLGPFTETIEAYDADRHTVSYS
AGGEKMPGFMKGLRNTWNLTQSGNGTKASMTLRADIAFPMNILMGWMMKMQFKKALNETIDDLKVYAETGRPSPRKVKVD
ASKKAIAARHSMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18725; Mature: 18725

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTITRTIDAPLDKVWDIVGPNYTSAGDWASSVYVSGARAGTPKVASAPAAGRVCETSL
CCEEEEECCCCCHHHHHHHCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCHHHCCC
GPFTETIEAYDADRHTVSYSAGGEKMPGFMKGLRNTWNLTQSGNGTKASMTLRADIAFPM
CCHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHH
NILMGWMMKMQFKKALNETIDDLKVYAETGRPSPRKVKVDASKKAIAARHSMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCC
>Mature Secondary Structure
MELTITRTIDAPLDKVWDIVGPNYTSAGDWASSVYVSGARAGTPKVASAPAAGRVCETSL
CCEEEEECCCCCHHHHHHHCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCHHHCCC
GPFTETIEAYDADRHTVSYSAGGEKMPGFMKGLRNTWNLTQSGNGTKASMTLRADIAFPM
CCHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHH
NILMGWMMKMQFKKALNETIDDLKVYAETGRPSPRKVKVDASKKAIAARHSMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA