Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054042

Identifier: 89054042

GI number: 89054042

Start: 1521727

End: 1522467

Strand: Direct

Name: 89054042

Synonym: Jann_1551

Alternate gene names: NA

Gene position: 1521727-1522467 (Clockwise)

Preceding gene: 89054041

Following gene: 89054044

Centisome position: 35.24

GC content: 52.9

Gene sequence:

>741_bases
ATGCTTGAGGAACTTTCAGAAAATGTTTGGATCGCGGAAGGAACATGCGTCAGTTTTCACGGTTTTCACGGTTTTCACGG
TTTTCACGGTTTTCACGGTTTTCACGGTTTTCAATATCCCACCAGAAGCGTCGTTGTGCGATTGAAAAGTGGTGCGATGT
GGGTGTGGTCCCCGGTCAAGTTCGACCAGGATCTGGCGGATGAGATCGAGAGCCTTGGAACGATCACGCATCTGGTCAGC
CCAAACAAGATCCATCACTTGTTTCTGGCAGACTGGTCGTCGCACGTCCCGACGGCGAAGATCTGGGGACCGAGGTCAAC
AGTCAATAAGCGTCGCGATCTCGTATTCCAACCGGCTCTGGATCACCTACCACCAAGGGACTGGGCCGAGGATTTCGAGC
AGTTCCATGTCAAAGGCTCTTTGGCCATGGACGAGATCCTGTTTCTGCACAAACAATCAAATACGCTTATTCTGGCCGAC
TTTTCGGAACATTTTTCAGACCAGTTCCTGCAACGTCACTGGCAGCCGTGGCAGCGCCGGATCGGTCAGTTTTGGGGCAT
CACGGAGGGGCGTGGCTTCGCACCTCTGGATTGGCGACTTTCCTTTCTCAATCGCTCACATCTGAGAACGCTGAAGCAAC
AATTGCTGGACCGTCAGGTGGATCATGTGGTTATGGCGCACGGAGAAATTGCCCGGACAGATGGACATCGCTTCCTTCAG
CGCAGCCTTGCTTGGATCTAG

Upstream 100 bases:

>100_bases
CCGACGTTGGACCCGACCGAGGCTGAGCACGCGACGCACGGCGCGCTTGAAATGTTGAGGAACATGGTTGCCCCGGTTGA
AGGAGGAAGGGACGCGACCG

Downstream 100 bases:

>100_bases
CGGCCCTCGGCAGACATTGATTGAGGCTCCGGCGCCGCATCGTGAGCATCGGTGTAAACGGCGGCAATGCGGGGCTTTGC
TGCCGTTGGCGTCAAGTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MLEELSENVWIAEGTCVSFHGFHGFHGFHGFHGFHGFQYPTRSVVVRLKSGAMWVWSPVKFDQDLADEIESLGTITHLVS
PNKIHHLFLADWSSHVPTAKIWGPRSTVNKRRDLVFQPALDHLPPRDWAEDFEQFHVKGSLAMDEILFLHKQSNTLILAD
FSEHFSDQFLQRHWQPWQRRIGQFWGITEGRGFAPLDWRLSFLNRSHLRTLKQQLLDRQVDHVVMAHGEIARTDGHRFLQ
RSLAWI

Sequences:

>Translated_246_residues
MLEELSENVWIAEGTCVSFHGFHGFHGFHGFHGFHGFQYPTRSVVVRLKSGAMWVWSPVKFDQDLADEIESLGTITHLVS
PNKIHHLFLADWSSHVPTAKIWGPRSTVNKRRDLVFQPALDHLPPRDWAEDFEQFHVKGSLAMDEILFLHKQSNTLILAD
FSEHFSDQFLQRHWQPWQRRIGQFWGITEGRGFAPLDWRLSFLNRSHLRTLKQQLLDRQVDHVVMAHGEIARTDGHRFLQ
RSLAWI
>Mature_246_residues
MLEELSENVWIAEGTCVSFHGFHGFHGFHGFHGFHGFQYPTRSVVVRLKSGAMWVWSPVKFDQDLADEIESLGTITHLVS
PNKIHHLFLADWSSHVPTAKIWGPRSTVNKRRDLVFQPALDHLPPRDWAEDFEQFHVKGSLAMDEILFLHKQSNTLILAD
FSEHFSDQFLQRHWQPWQRRIGQFWGITEGRGFAPLDWRLSFLNRSHLRTLKQQLLDRQVDHVVMAHGEIARTDGHRFLQ
RSLAWI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28758; Mature: 28758

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEELSENVWIAEGTCVSFHGFHGFHGFHGFHGFHGFQYPTRSVVVRLKSGAMWVWSPVK
CCCHHCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCEEEEECCC
FDQDLADEIESLGTITHLVSPNKIHHLFLADWSSHVPTAKIWGPRSTVNKRRDLVFQPAL
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCHHHHHHHHCEEECCHH
DHLPPRDWAEDFEQFHVKGSLAMDEILFLHKQSNTLILADFSEHFSDQFLQRHWQPWQRR
HCCCCHHHHHHHHHHHHCCCHHHHHHHHEEECCCEEEEECCHHHHHHHHHHHHCCHHHHH
IGQFWGITEGRGFAPLDWRLSFLNRSHLRTLKQQLLDRQVDHVVMAHGEIARTDGHRFLQ
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHH
RSLAWI
HHHCCC
>Mature Secondary Structure
MLEELSENVWIAEGTCVSFHGFHGFHGFHGFHGFHGFQYPTRSVVVRLKSGAMWVWSPVK
CCCHHCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCEEEEECCC
FDQDLADEIESLGTITHLVSPNKIHHLFLADWSSHVPTAKIWGPRSTVNKRRDLVFQPAL
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCHHHHHHHHCEEECCHH
DHLPPRDWAEDFEQFHVKGSLAMDEILFLHKQSNTLILADFSEHFSDQFLQRHWQPWQRR
HCCCCHHHHHHHHHHHHCCCHHHHHHHHEEECCCEEEEECCHHHHHHHHHHHHCCHHHHH
IGQFWGITEGRGFAPLDWRLSFLNRSHLRTLKQQLLDRQVDHVVMAHGEIARTDGHRFLQ
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHH
RSLAWI
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA