| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89054024
Identifier: 89054024
GI number: 89054024
Start: 1504314
End: 1504763
Strand: Direct
Name: 89054024
Synonym: Jann_1533
Alternate gene names: NA
Gene position: 1504314-1504763 (Clockwise)
Preceding gene: 89054023
Following gene: 89054025
Centisome position: 34.84
GC content: 49.11
Gene sequence:
>450_bases ATGAAGGTACTTCTTGTCGAGGATGATGAGTATAAGCAGACCAAGGTTGAGGCTGCCCTAAGAAGCGTTGCTTCCGAACT GGACCTTGTAGTAGCAAAAACTGTTCGAGATGCCGTTGGCTGTATGCAGGGCGACGGATATGACCATATTGTCTTAGACA TCGCTTTGCCTAGCCACGGCCAAGTTCCTGGTGGCGGAGCAGGGTTGCCAATGCCAGCAGGAGGGATCGAAGTCTTGCTC GAAATCTCTTACCAGTCTCGGCATGACCCCGTTACAATTCTCACTCAATACCCTGAGATCGAGTATGATGGAAAGCTGGT CGATCTTACTCGTGCGCGGCGTTTCTTACAAAAAAACATCCAAGCAACCATCATCGACGTCATTCACTTCGAGATGGACA ACGAACTTTGGAAACACCAGTTAAAAAAGGCGATTTCTGGACGTGGCTGA
Upstream 100 bases:
>100_bases TGAGTGATTTCACTGTCAATTTTGGTGAAGGCAGAGTCACGTTTTCGGTCGTTATGAGCCTTGTAATGACAGGTACTGAA CAAAGGACTGAGGCTGCCGA
Downstream 100 bases:
>100_bases GTTCCTGATTATAGAAGATGAAGCGGAAAAGCGGTCATCAATCGAAAATGAGATACGTGCATACTTTGGCGATCCAGGCA TCCAGTTTTGCGTTGCTCAG
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MKVLLVEDDEYKQTKVEAALRSVASELDLVVAKTVRDAVGCMQGDGYDHIVLDIALPSHGQVPGGGAGLPMPAGGIEVLL EISYQSRHDPVTILTQYPEIEYDGKLVDLTRARRFLQKNIQATIIDVIHFEMDNELWKHQLKKAISGRG
Sequences:
>Translated_149_residues MKVLLVEDDEYKQTKVEAALRSVASELDLVVAKTVRDAVGCMQGDGYDHIVLDIALPSHGQVPGGGAGLPMPAGGIEVLL EISYQSRHDPVTILTQYPEIEYDGKLVDLTRARRFLQKNIQATIIDVIHFEMDNELWKHQLKKAISGRG >Mature_149_residues MKVLLVEDDEYKQTKVEAALRSVASELDLVVAKTVRDAVGCMQGDGYDHIVLDIALPSHGQVPGGGAGLPMPAGGIEVLL EISYQSRHDPVTILTQYPEIEYDGKLVDLTRARRFLQKNIQATIIDVIHFEMDNELWKHQLKKAISGRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16479; Mature: 16479
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLLVEDDEYKQTKVEAALRSVASELDLVVAKTVRDAVGCMQGDGYDHIVLDIALPSHG CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCC QVPGGGAGLPMPAGGIEVLLEISYQSRHDPVTILTQYPEIEYDGKLVDLTRARRFLQKNI CCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHCC QATIIDVIHFEMDNELWKHQLKKAISGRG HHHHHHHHHHHCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKVLLVEDDEYKQTKVEAALRSVASELDLVVAKTVRDAVGCMQGDGYDHIVLDIALPSHG CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCC QVPGGGAGLPMPAGGIEVLLEISYQSRHDPVTILTQYPEIEYDGKLVDLTRARRFLQKNI CCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHCC QATIIDVIHFEMDNELWKHQLKKAISGRG HHHHHHHHHHHCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA