Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054025

Identifier: 89054025

GI number: 89054025

Start: 1504756

End: 1505916

Strand: Direct

Name: 89054025

Synonym: Jann_1534

Alternate gene names: NA

Gene position: 1504756-1505916 (Clockwise)

Preceding gene: 89054024

Following gene: 89054026

Centisome position: 34.85

GC content: 47.63

Gene sequence:

>1161_bases
GTGGCTGAGTTCCTGATTATAGAAGATGAAGCGGAAAAGCGGTCATCAATCGAAAATGAGATACGTGCATACTTTGGCGA
TCCAGGCATCCAGTTTTGCGTTGCTCAGACATTTGCTGAGGCTGCCAAACTAATCTTCGAACGGCGTTTTGACCTTATTG
TAACAGACTTGATGCTACCGCGACGAAAGGGTGATGAGCCGTCCGACTTTTCAGACAATCTTCTAGATTTCTTGAGCAGC
AGTTCTTTAAATTCTAGCGCAGTCGTTGTCGCAATTTCGCAATTTGGTGACTTGATCGAAAGACAAGCTACAAGCTTCAA
GCGCCTTGGTATTTTTCTGCTTGACTACAATAACCAGTCAGATTGGCGGACGTGTTTGAAAGTCTGCTTGCAACGAGTTG
AACACAAACAAACAGTTGATTTTGCCATCATATGTGCTCTTGAAGAAGAGCGAGTGGGTTTTCGAGAAGTCGAAGGCGAT
GCGACGTTTGGTGAGCTCTCACGGTACCACGGTTTGGATTGTCGAGACATATCCATCGCAGGTTTCAATGGAATTTGTGT
TGTCCAGCCGCGTATGGGCTTAGTCGACGCTGCTGCAATCTGCTCTCAGATCCTTTCACTGTTTCGCCCCAGACTAATAT
GCATGGCAGGCATTTGTGCTGGGTTTGAGGGCGAAGTTGAACTTGGAACCTTATTGGTTTCTGACCCATCTTGGGAACAT
CAATCTGGAAAATGGAAGGGCGAAGATTTCAAGTTGTCGCACTATCAAGAGCCCTTGCAAAACAGCGTTCGAACGATACT
CAGCCAGGTCATTGAAGAGGACCCCACCTGCCAGAGTCTGACTTCCGACCTACCTGAATTATATCGCTCGTTGGAACGAG
CAGCTGCAATCATGCCAACAGTCTCGGGTTCTGCGGTAATCGCATCAAGTGATAAGGCAAGTGAAATCAGGGAACAGCAT
CGCAAAGTAGGAGGCCTAGATATGGAAGTTTATGGGCTGTATCGCGCCGCGGCTATTCATTCTGATAGCATAAGCTGCTT
TGCGGCGAAGACCGTCGTTGACCTTGCGAACGAAGCAAAGGGCGATGACCTGCACCATGCAGGTGCAGTTTTTTCTGCTC
GTTTCGTCGCAAAGGCAATCCATCGAATTCTAAGTGATTGA

Upstream 100 bases:

>100_bases
TTCTTACAAAAAAACATCCAAGCAACCATCATCGACGTCATTCACTTCGAGATGGACAACGAACTTTGGAAACACCAGTT
AAAAAAGGCGATTTCTGGAC

Downstream 100 bases:

>100_bases
CGCAATGGAGTGAATCTAAACACTTAGTCGGTTGCTAAAATGCACTGTCAATGTCCGCTTTGGCGGCTCATAGACTTCTG
TGTGCGACTGCAGCGAAGGT

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MAEFLIIEDEAEKRSSIENEIRAYFGDPGIQFCVAQTFAEAAKLIFERRFDLIVTDLMLPRRKGDEPSDFSDNLLDFLSS
SSLNSSAVVVAISQFGDLIERQATSFKRLGIFLLDYNNQSDWRTCLKVCLQRVEHKQTVDFAIICALEEERVGFREVEGD
ATFGELSRYHGLDCRDISIAGFNGICVVQPRMGLVDAAAICSQILSLFRPRLICMAGICAGFEGEVELGTLLVSDPSWEH
QSGKWKGEDFKLSHYQEPLQNSVRTILSQVIEEDPTCQSLTSDLPELYRSLERAAAIMPTVSGSAVIASSDKASEIREQH
RKVGGLDMEVYGLYRAAAIHSDSISCFAAKTVVDLANEAKGDDLHHAGAVFSARFVAKAIHRILSD

Sequences:

>Translated_386_residues
MAEFLIIEDEAEKRSSIENEIRAYFGDPGIQFCVAQTFAEAAKLIFERRFDLIVTDLMLPRRKGDEPSDFSDNLLDFLSS
SSLNSSAVVVAISQFGDLIERQATSFKRLGIFLLDYNNQSDWRTCLKVCLQRVEHKQTVDFAIICALEEERVGFREVEGD
ATFGELSRYHGLDCRDISIAGFNGICVVQPRMGLVDAAAICSQILSLFRPRLICMAGICAGFEGEVELGTLLVSDPSWEH
QSGKWKGEDFKLSHYQEPLQNSVRTILSQVIEEDPTCQSLTSDLPELYRSLERAAAIMPTVSGSAVIASSDKASEIREQH
RKVGGLDMEVYGLYRAAAIHSDSISCFAAKTVVDLANEAKGDDLHHAGAVFSARFVAKAIHRILSD
>Mature_385_residues
AEFLIIEDEAEKRSSIENEIRAYFGDPGIQFCVAQTFAEAAKLIFERRFDLIVTDLMLPRRKGDEPSDFSDNLLDFLSSS
SLNSSAVVVAISQFGDLIERQATSFKRLGIFLLDYNNQSDWRTCLKVCLQRVEHKQTVDFAIICALEEERVGFREVEGDA
TFGELSRYHGLDCRDISIAGFNGICVVQPRMGLVDAAAICSQILSLFRPRLICMAGICAGFEGEVELGTLLVSDPSWEHQ
SGKWKGEDFKLSHYQEPLQNSVRTILSQVIEEDPTCQSLTSDLPELYRSLERAAAIMPTVSGSAVIASSDKASEIREQHR
KVGGLDMEVYGLYRAAAIHSDSISCFAAKTVVDLANEAKGDDLHHAGAVFSARFVAKAIHRILSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR000845
- InterPro:   IPR001789 [H]

Pfam domain/function: PF01048 PNP_UDP_1; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 42762; Mature: 42631

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEFLIIEDEAEKRSSIENEIRAYFGDPGIQFCVAQTFAEAAKLIFERRFDLIVTDLMLP
CCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RRKGDEPSDFSDNLLDFLSSSSLNSSAVVVAISQFGDLIERQATSFKRLGIFLLDYNNQS
CCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCEEEEEECCCCH
DWRTCLKVCLQRVEHKQTVDFAIICALEEERVGFREVEGDATFGELSRYHGLDCRDISIA
HHHHHHHHHHHHHHHHHCCCEEEEEEECHHCCCCEECCCCCCHHHHHHHCCCCCCEEEEE
GFNGICVVQPRMGLVDAAAICSQILSLFRPRLICMAGICAGFEGEVELGTLLVSDPSWEH
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCC
QSGKWKGEDFKLSHYQEPLQNSVRTILSQVIEEDPTCQSLTSDLPELYRSLERAAAIMPT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
VSGSAVIASSDKASEIREQHRKVGGLDMEVYGLYRAAAIHSDSISCFAAKTVVDLANEAK
CCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
GDDLHHAGAVFSARFVAKAIHRILSD
CCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AEFLIIEDEAEKRSSIENEIRAYFGDPGIQFCVAQTFAEAAKLIFERRFDLIVTDLMLP
CCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RRKGDEPSDFSDNLLDFLSSSSLNSSAVVVAISQFGDLIERQATSFKRLGIFLLDYNNQS
CCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCEEEEEECCCCH
DWRTCLKVCLQRVEHKQTVDFAIICALEEERVGFREVEGDATFGELSRYHGLDCRDISIA
HHHHHHHHHHHHHHHHHCCCEEEEEEECHHCCCCEECCCCCCHHHHHHHCCCCCCEEEEE
GFNGICVVQPRMGLVDAAAICSQILSLFRPRLICMAGICAGFEGEVELGTLLVSDPSWEH
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCC
QSGKWKGEDFKLSHYQEPLQNSVRTILSQVIEEDPTCQSLTSDLPELYRSLERAAAIMPT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
VSGSAVIASSDKASEIREQHRKVGGLDMEVYGLYRAAAIHSDSISCFAAKTVVDLANEAK
CCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
GDDLHHAGAVFSARFVAKAIHRILSD
CCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]