| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054025
Identifier: 89054025
GI number: 89054025
Start: 1504756
End: 1505916
Strand: Direct
Name: 89054025
Synonym: Jann_1534
Alternate gene names: NA
Gene position: 1504756-1505916 (Clockwise)
Preceding gene: 89054024
Following gene: 89054026
Centisome position: 34.85
GC content: 47.63
Gene sequence:
>1161_bases GTGGCTGAGTTCCTGATTATAGAAGATGAAGCGGAAAAGCGGTCATCAATCGAAAATGAGATACGTGCATACTTTGGCGA TCCAGGCATCCAGTTTTGCGTTGCTCAGACATTTGCTGAGGCTGCCAAACTAATCTTCGAACGGCGTTTTGACCTTATTG TAACAGACTTGATGCTACCGCGACGAAAGGGTGATGAGCCGTCCGACTTTTCAGACAATCTTCTAGATTTCTTGAGCAGC AGTTCTTTAAATTCTAGCGCAGTCGTTGTCGCAATTTCGCAATTTGGTGACTTGATCGAAAGACAAGCTACAAGCTTCAA GCGCCTTGGTATTTTTCTGCTTGACTACAATAACCAGTCAGATTGGCGGACGTGTTTGAAAGTCTGCTTGCAACGAGTTG AACACAAACAAACAGTTGATTTTGCCATCATATGTGCTCTTGAAGAAGAGCGAGTGGGTTTTCGAGAAGTCGAAGGCGAT GCGACGTTTGGTGAGCTCTCACGGTACCACGGTTTGGATTGTCGAGACATATCCATCGCAGGTTTCAATGGAATTTGTGT TGTCCAGCCGCGTATGGGCTTAGTCGACGCTGCTGCAATCTGCTCTCAGATCCTTTCACTGTTTCGCCCCAGACTAATAT GCATGGCAGGCATTTGTGCTGGGTTTGAGGGCGAAGTTGAACTTGGAACCTTATTGGTTTCTGACCCATCTTGGGAACAT CAATCTGGAAAATGGAAGGGCGAAGATTTCAAGTTGTCGCACTATCAAGAGCCCTTGCAAAACAGCGTTCGAACGATACT CAGCCAGGTCATTGAAGAGGACCCCACCTGCCAGAGTCTGACTTCCGACCTACCTGAATTATATCGCTCGTTGGAACGAG CAGCTGCAATCATGCCAACAGTCTCGGGTTCTGCGGTAATCGCATCAAGTGATAAGGCAAGTGAAATCAGGGAACAGCAT CGCAAAGTAGGAGGCCTAGATATGGAAGTTTATGGGCTGTATCGCGCCGCGGCTATTCATTCTGATAGCATAAGCTGCTT TGCGGCGAAGACCGTCGTTGACCTTGCGAACGAAGCAAAGGGCGATGACCTGCACCATGCAGGTGCAGTTTTTTCTGCTC GTTTCGTCGCAAAGGCAATCCATCGAATTCTAAGTGATTGA
Upstream 100 bases:
>100_bases TTCTTACAAAAAAACATCCAAGCAACCATCATCGACGTCATTCACTTCGAGATGGACAACGAACTTTGGAAACACCAGTT AAAAAAGGCGATTTCTGGAC
Downstream 100 bases:
>100_bases CGCAATGGAGTGAATCTAAACACTTAGTCGGTTGCTAAAATGCACTGTCAATGTCCGCTTTGGCGGCTCATAGACTTCTG TGTGCGACTGCAGCGAAGGT
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MAEFLIIEDEAEKRSSIENEIRAYFGDPGIQFCVAQTFAEAAKLIFERRFDLIVTDLMLPRRKGDEPSDFSDNLLDFLSS SSLNSSAVVVAISQFGDLIERQATSFKRLGIFLLDYNNQSDWRTCLKVCLQRVEHKQTVDFAIICALEEERVGFREVEGD ATFGELSRYHGLDCRDISIAGFNGICVVQPRMGLVDAAAICSQILSLFRPRLICMAGICAGFEGEVELGTLLVSDPSWEH QSGKWKGEDFKLSHYQEPLQNSVRTILSQVIEEDPTCQSLTSDLPELYRSLERAAAIMPTVSGSAVIASSDKASEIREQH RKVGGLDMEVYGLYRAAAIHSDSISCFAAKTVVDLANEAKGDDLHHAGAVFSARFVAKAIHRILSD
Sequences:
>Translated_386_residues MAEFLIIEDEAEKRSSIENEIRAYFGDPGIQFCVAQTFAEAAKLIFERRFDLIVTDLMLPRRKGDEPSDFSDNLLDFLSS SSLNSSAVVVAISQFGDLIERQATSFKRLGIFLLDYNNQSDWRTCLKVCLQRVEHKQTVDFAIICALEEERVGFREVEGD ATFGELSRYHGLDCRDISIAGFNGICVVQPRMGLVDAAAICSQILSLFRPRLICMAGICAGFEGEVELGTLLVSDPSWEH QSGKWKGEDFKLSHYQEPLQNSVRTILSQVIEEDPTCQSLTSDLPELYRSLERAAAIMPTVSGSAVIASSDKASEIREQH RKVGGLDMEVYGLYRAAAIHSDSISCFAAKTVVDLANEAKGDDLHHAGAVFSARFVAKAIHRILSD >Mature_385_residues AEFLIIEDEAEKRSSIENEIRAYFGDPGIQFCVAQTFAEAAKLIFERRFDLIVTDLMLPRRKGDEPSDFSDNLLDFLSSS SLNSSAVVVAISQFGDLIERQATSFKRLGIFLLDYNNQSDWRTCLKVCLQRVEHKQTVDFAIICALEEERVGFREVEGDA TFGELSRYHGLDCRDISIAGFNGICVVQPRMGLVDAAAICSQILSLFRPRLICMAGICAGFEGEVELGTLLVSDPSWEHQ SGKWKGEDFKLSHYQEPLQNSVRTILSQVIEEDPTCQSLTSDLPELYRSLERAAAIMPTVSGSAVIASSDKASEIREQHR KVGGLDMEVYGLYRAAAIHSDSISCFAAKTVVDLANEAKGDDLHHAGAVFSARFVAKAIHRILSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR000845 - InterPro: IPR001789 [H]
Pfam domain/function: PF01048 PNP_UDP_1; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 42762; Mature: 42631
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEFLIIEDEAEKRSSIENEIRAYFGDPGIQFCVAQTFAEAAKLIFERRFDLIVTDLMLP CCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RRKGDEPSDFSDNLLDFLSSSSLNSSAVVVAISQFGDLIERQATSFKRLGIFLLDYNNQS CCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCEEEEEECCCCH DWRTCLKVCLQRVEHKQTVDFAIICALEEERVGFREVEGDATFGELSRYHGLDCRDISIA HHHHHHHHHHHHHHHHHCCCEEEEEEECHHCCCCEECCCCCCHHHHHHHCCCCCCEEEEE GFNGICVVQPRMGLVDAAAICSQILSLFRPRLICMAGICAGFEGEVELGTLLVSDPSWEH CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCC QSGKWKGEDFKLSHYQEPLQNSVRTILSQVIEEDPTCQSLTSDLPELYRSLERAAAIMPT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC VSGSAVIASSDKASEIREQHRKVGGLDMEVYGLYRAAAIHSDSISCFAAKTVVDLANEAK CCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC GDDLHHAGAVFSARFVAKAIHRILSD CCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AEFLIIEDEAEKRSSIENEIRAYFGDPGIQFCVAQTFAEAAKLIFERRFDLIVTDLMLP CCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RRKGDEPSDFSDNLLDFLSSSSLNSSAVVVAISQFGDLIERQATSFKRLGIFLLDYNNQS CCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCEEEEEECCCCH DWRTCLKVCLQRVEHKQTVDFAIICALEEERVGFREVEGDATFGELSRYHGLDCRDISIA HHHHHHHHHHHHHHHHHCCCEEEEEEECHHCCCCEECCCCCCHHHHHHHCCCCCCEEEEE GFNGICVVQPRMGLVDAAAICSQILSLFRPRLICMAGICAGFEGEVELGTLLVSDPSWEH CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCC QSGKWKGEDFKLSHYQEPLQNSVRTILSQVIEEDPTCQSLTSDLPELYRSLERAAAIMPT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC VSGSAVIASSDKASEIREQHRKVGGLDMEVYGLYRAAAIHSDSISCFAAKTVVDLANEAK CCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC GDDLHHAGAVFSARFVAKAIHRILSD CCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]