| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is ygaZ [C]
Identifier: 89054014
GI number: 89054014
Start: 1492562
End: 1493242
Strand: Direct
Name: ygaZ [C]
Synonym: Jann_1523
Alternate gene names: 89054014
Gene position: 1492562-1493242 (Clockwise)
Preceding gene: 89054011
Following gene: 89054016
Centisome position: 34.57
GC content: 57.12
Gene sequence:
>681_bases ATGAGACACGGCGCAATTGCTATCCTCCCACTTGCCCTCGGTGCGGCCATTTATGGCTTCGCCTTTGGCCTTCTCGCTGC CCAAGTTGGCTTCCCCTCGTGGGGTGTCAGCCTGATGAGCGCAACCGTACACGCGGGTTCGTCACAGATCGTCGCTGTTG AACAGTTTGCCTCAACACAAACCGTGGTCGGTGCTGCATTGGCGGGTGCTGCTTTGAACCTGCGATATATTGGGATCGTT GCATCGCTGTCGGAGGTTTTGGCAGGGCTGACGTTGAAAGCCAAATTGCTCGCGATCCATATCACCGGCGACGAAAATTG GGCACTCACCATGGCCGAGCGCGCCAAGTCGCCAGATGTTGGGGCTGCGTTCCTGATCGGCTCAGGTTTTGTGATGATCA CGGTTTGGACGACCTCAACGACCGCTGGAGCGATAATCGGCGCTGTTCTACCTAATCTTGAGCGCTTCGGACTAGGGTTC GCTTTTACAGCCGCATTCATTGCAATGGCCCGAGGTCTTTGGCGTGGGAGGCGTCAGTTGATGCCGTGGCTAGTTGCTGC GGTGGTGACCATCATCGTCGTGTTGCTCGGTACTCCAAAGGCTTACGGGATTGTTGTCGGAACACTGTGCGGTCTAGGTG TCGCGGGTACGCTGCGAAAGACCACAGGAGCGACGGCATGA
Upstream 100 bases:
>100_bases CTCTCCTTCTTTGAATTTACCGCTTTCTTGATGTGACTACATCACAAAAATCCACAACTGAACATATATCGTATCACCGG CTTTCACTAAACCTGTCCTA
Downstream 100 bases:
>100_bases GCGGCGATCATTGGGCTGTCATTGCGATCTTGGCGGTCGCGGCGTTTTCTATTCGTGTCTTGGGTATGGTCGCTGGTGGC CGTATTCGCGCGTCTCGGTA
Product: AzlC-like protein
Products: NA
Alternate protein names: Branched-Chain Amino Acid Transporter Protein; Branched-Chain Amino Acid Permease-Like; AzlC Protein; AzlC-Like
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MRHGAIAILPLALGAAIYGFAFGLLAAQVGFPSWGVSLMSATVHAGSSQIVAVEQFASTQTVVGAALAGAALNLRYIGIV ASLSEVLAGLTLKAKLLAIHITGDENWALTMAERAKSPDVGAAFLIGSGFVMITVWTTSTTAGAIIGAVLPNLERFGLGF AFTAAFIAMARGLWRGRRQLMPWLVAAVVTIIVVLLGTPKAYGIVVGTLCGLGVAGTLRKTTGATA
Sequences:
>Translated_226_residues MRHGAIAILPLALGAAIYGFAFGLLAAQVGFPSWGVSLMSATVHAGSSQIVAVEQFASTQTVVGAALAGAALNLRYIGIV ASLSEVLAGLTLKAKLLAIHITGDENWALTMAERAKSPDVGAAFLIGSGFVMITVWTTSTTAGAIIGAVLPNLERFGLGF AFTAAFIAMARGLWRGRRQLMPWLVAAVVTIIVVLLGTPKAYGIVVGTLCGLGVAGTLRKTTGATA >Mature_226_residues MRHGAIAILPLALGAAIYGFAFGLLAAQVGFPSWGVSLMSATVHAGSSQIVAVEQFASTQTVVGAALAGAALNLRYIGIV ASLSEVLAGLTLKAKLLAIHITGDENWALTMAERAKSPDVGAAFLIGSGFVMITVWTTSTTAGAIIGAVLPNLERFGLGF AFTAAFIAMARGLWRGRRQLMPWLVAAVVTIIVVLLGTPKAYGIVVGTLCGLGVAGTLRKTTGATA
Specific function: Unknown
COG id: COG1296
COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23081; Mature: 23081
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHGAIAILPLALGAAIYGFAFGLLAAQVGFPSWGVSLMSATVHAGSSQIVAVEQFASTQ CCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHH TVVGAALAGAALNLRYIGIVASLSEVLAGLTLKAKLLAIHITGDENWALTMAERAKSPDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCEEEEEHHHCCCCCC GAAFLIGSGFVMITVWTTSTTAGAIIGAVLPNLERFGLGFAFTAAFIAMARGLWRGRRQL CEEEEECCCEEEEEEEECCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH MPWLVAAVVTIIVVLLGTPKAYGIVVGTLCGLGVAGTLRKTTGATA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHCCCCCCC >Mature Secondary Structure MRHGAIAILPLALGAAIYGFAFGLLAAQVGFPSWGVSLMSATVHAGSSQIVAVEQFASTQ CCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHH TVVGAALAGAALNLRYIGIVASLSEVLAGLTLKAKLLAIHITGDENWALTMAERAKSPDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCEEEEEHHHCCCCCC GAAFLIGSGFVMITVWTTSTTAGAIIGAVLPNLERFGLGFAFTAAFIAMARGLWRGRRQL CEEEEECCCEEEEEEEECCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH MPWLVAAVVTIIVVLLGTPKAYGIVVGTLCGLGVAGTLRKTTGATA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA