| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is ucpA [H]
Identifier: 89054016
GI number: 89054016
Start: 1494831
End: 1495841
Strand: Direct
Name: ucpA [H]
Synonym: Jann_1525
Alternate gene names: 89054016
Gene position: 1494831-1495841 (Clockwise)
Preceding gene: 89054014
Following gene: 89054017
Centisome position: 34.62
GC content: 60.24
Gene sequence:
>1011_bases ATGACAGTTCAAAAGACTTCAATCGAAACGCCCCAAAACAACGACCTGAACCGCCGCGCCGTGTTGGCCGGTGTCGGGAC CCTTGGGATTGCAGCGTCGGCCACCGGCGCAGTTCACGCACAGACAGAAACGGAAGGAAACGTGATGGAAAATGGAATGT TGGCTGGAAAAGTTGCCCTGGTGACCGGGGCCGCACGCGGGATCGGGCTGTCGGTCGCCAAGACCTATGGTCGGCATGGC GCAAAGGTCGTGATGCTGGATATTGCCGATCCATCGGCCGTTCCACCCGTCGAGGGCTTCCGCATCGCCAATGCCGAAGA ATTCCAGGCAGCCATTGAAGAGGTACGTGCGATTGCCCCTGATACACTTGGGATCACGGCTGATGTTCGCGACCGTGCCG CGCTTGCAAATGCGGTCGCCCAAGCGACCGAGACTTTCGGCGGGTTGGACATCGCTGTGGCGAATGCGGGCTATGTCCGC TGGCATGGCTTTGCCGATGGTACGGAAGAAGACTGGAAGAGCGTCTATGACGTCAATGTCCACGGTGTTTTCAACACGTT CTACGCCGCTATCCCGGCATTGCGCCAGCGCGGCGGCGGATCTCTGATCTCGCTCAGCTCCATCGCTGGTCGGATCGGCG TCATCGGCAACGGGGCCTATAATTCTTCGAAATGGGCCGTCATCGGCATGACGAAGCAAGCCGCGCTGGAACTGGGCGCG GATCATATCCGGGCCAACGCCATTGCGCCGGGTCCCGTGAACACGCCCATGTATCGGTCGGAAGGCCAAAAACGCTCGAT GGGCATCGACGTGGCCGCTTTGTCGGAGGTTGAGGCAAATGCAGCGCAAGACGCGATGTTGAACCCGGCCTTGCCCTTAG GTGAGACCCCCGCGTCCGAGCCGCAAGCCATCGCAAACACCGCTCTCTACCTTGCGTCCGATCTTTCGGCGGACGTCTCA GGTGCCGTCCTAGACACCGCGCTTGGCTACAACGCAAACTACACTGGCTAG
Upstream 100 bases:
>100_bases TCATTCATTAGCCTCGCTTAATAGCTTGATCAGAAAGTGCCGGATTATCGAACAGCCGCCAAGGCTCCATATTCGTCTCA TCAACAACGGAGACAGAGCC
Downstream 100 bases:
>100_bases TTCTCCGTTGGTGTAGCTTAGGCCCGGGATCGCAACTGCGATCCCGGGCCTTCATTGTCGAATGTGTTCGTGGAGGTCGG TACATTCGTGTCCGGCCCTA
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTVQKTSIETPQNNDLNRRAVLAGVGTLGIAASATGAVHAQTETEGNVMENGMLAGKVALVTGAARGIGLSVAKTYGRHG AKVVMLDIADPSAVPPVEGFRIANAEEFQAAIEEVRAIAPDTLGITADVRDRAALANAVAQATETFGGLDIAVANAGYVR WHGFADGTEEDWKSVYDVNVHGVFNTFYAAIPALRQRGGGSLISLSSIAGRIGVIGNGAYNSSKWAVIGMTKQAALELGA DHIRANAIAPGPVNTPMYRSEGQKRSMGIDVAALSEVEANAAQDAMLNPALPLGETPASEPQAIANTALYLASDLSADVS GAVLDTALGYNANYTG
Sequences:
>Translated_336_residues MTVQKTSIETPQNNDLNRRAVLAGVGTLGIAASATGAVHAQTETEGNVMENGMLAGKVALVTGAARGIGLSVAKTYGRHG AKVVMLDIADPSAVPPVEGFRIANAEEFQAAIEEVRAIAPDTLGITADVRDRAALANAVAQATETFGGLDIAVANAGYVR WHGFADGTEEDWKSVYDVNVHGVFNTFYAAIPALRQRGGGSLISLSSIAGRIGVIGNGAYNSSKWAVIGMTKQAALELGA DHIRANAIAPGPVNTPMYRSEGQKRSMGIDVAALSEVEANAAQDAMLNPALPLGETPASEPQAIANTALYLASDLSADVS GAVLDTALGYNANYTG >Mature_335_residues TVQKTSIETPQNNDLNRRAVLAGVGTLGIAASATGAVHAQTETEGNVMENGMLAGKVALVTGAARGIGLSVAKTYGRHGA KVVMLDIADPSAVPPVEGFRIANAEEFQAAIEEVRAIAPDTLGITADVRDRAALANAVAQATETFGGLDIAVANAGYVRW HGFADGTEEDWKSVYDVNVHGVFNTFYAAIPALRQRGGGSLISLSSIAGRIGVIGNGAYNSSKWAVIGMTKQAALELGAD HIRANAIAPGPVNTPMYRSEGQKRSMGIDVAALSEVEANAAQDAMLNPALPLGETPASEPQAIANTALYLASDLSADVSG AVLDTALGYNANYTG
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=235, Percent_Identity=33.6170212765957, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI31542939, Length=242, Percent_Identity=31.404958677686, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI15277342, Length=278, Percent_Identity=31.294964028777, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI10190704, Length=280, Percent_Identity=29.2857142857143, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI33667109, Length=210, Percent_Identity=32.8571428571429, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI5031737, Length=210, Percent_Identity=32.8571428571429, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI66933014, Length=272, Percent_Identity=30.1470588235294, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI126723191, Length=222, Percent_Identity=31.0810810810811, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI4758504, Length=221, Percent_Identity=32.579185520362, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI224922801, Length=184, Percent_Identity=32.0652173913043, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI4504505, Length=196, Percent_Identity=30.6122448979592, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI126723750, Length=210, Percent_Identity=30, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI7705925, Length=281, Percent_Identity=28.4697508896797, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI40807363, Length=209, Percent_Identity=28.7081339712919, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI223718074, Length=209, Percent_Identity=30.622009569378, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI210032110, Length=205, Percent_Identity=24.8780487804878, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI40254992, Length=203, Percent_Identity=28.0788177339901, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI59889578, Length=199, Percent_Identity=29.6482412060301, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI310128830, Length=217, Percent_Identity=28.110599078341, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI310115468, Length=217, Percent_Identity=28.110599078341, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI302344755, Length=109, Percent_Identity=37.6146788990826, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI142976729, Length=260, Percent_Identity=23.0769230769231, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI19923817, Length=223, Percent_Identity=27.3542600896861, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI109715829, Length=206, Percent_Identity=28.6407766990291, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI83715985, Length=195, Percent_Identity=31.7948717948718, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI4503817, Length=219, Percent_Identity=24.2009132420091, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI40254986, Length=156, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI20149619, Length=202, Percent_Identity=26.7326732673267, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI25282469, Length=224, Percent_Identity=26.3392857142857, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI87082100, Length=271, Percent_Identity=34.3173431734317, Blast_Score=139, Evalue=3e-34, Organism=Escherichia coli, GI1787335, Length=269, Percent_Identity=30.4832713754647, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1786812, Length=267, Percent_Identity=29.5880149812734, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1790717, Length=271, Percent_Identity=29.520295202952, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1789208, Length=221, Percent_Identity=31.6742081447964, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1787905, Length=275, Percent_Identity=29.8181818181818, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI87082160, Length=283, Percent_Identity=29.6819787985866, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1789378, Length=280, Percent_Identity=28.9285714285714, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788459, Length=180, Percent_Identity=30.5555555555556, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI2367365, Length=220, Percent_Identity=28.6363636363636, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787526, Length=209, Percent_Identity=30.622009569378, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1787820, Length=208, Percent_Identity=28.8461538461538, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI2367175, Length=284, Percent_Identity=26.4084507042254, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI25147288, Length=281, Percent_Identity=30.2491103202847, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17555706, Length=278, Percent_Identity=30.2158273381295, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17560676, Length=218, Percent_Identity=30.2752293577982, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17561402, Length=282, Percent_Identity=28.0141843971631, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17567345, Length=208, Percent_Identity=25.9615384615385, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17568967, Length=195, Percent_Identity=31.7948717948718, Blast_Score=78, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17538182, Length=221, Percent_Identity=30.7692307692308, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI193203117, Length=235, Percent_Identity=24.6808510638298, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17564282, Length=264, Percent_Identity=25, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17508895, Length=212, Percent_Identity=25, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI193203115, Length=205, Percent_Identity=24.8780487804878, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71994600, Length=268, Percent_Identity=27.6119402985075, Blast_Score=71, Evalue=8e-13, Organism=Caenorhabditis elegans, GI71994604, Length=209, Percent_Identity=27.7511961722488, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17544670, Length=270, Percent_Identity=27.4074074074074, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17531453, Length=276, Percent_Identity=27.536231884058, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193204405, Length=269, Percent_Identity=27.8810408921933, Blast_Score=66, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=278, Percent_Identity=28.0575539568345, Blast_Score=76, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6322861, Length=280, Percent_Identity=25.3571428571429, Blast_Score=73, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6322227, Length=244, Percent_Identity=27.0491803278689, Blast_Score=69, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6323882, Length=233, Percent_Identity=28.3261802575107, Blast_Score=67, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6322226, Length=205, Percent_Identity=28.780487804878, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI24639444, Length=281, Percent_Identity=30.2491103202847, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI21355319, Length=225, Percent_Identity=32, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI24640492, Length=233, Percent_Identity=27.0386266094421, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI18859837, Length=198, Percent_Identity=30.8080808080808, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24643142, Length=204, Percent_Identity=32.843137254902, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI17737361, Length=224, Percent_Identity=29.9107142857143, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI281364892, Length=215, Percent_Identity=27.4418604651163, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI23397609, Length=210, Percent_Identity=31.4285714285714, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI24581726, Length=209, Percent_Identity=26.3157894736842, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24644339, Length=205, Percent_Identity=27.3170731707317, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI21357673, Length=210, Percent_Identity=27.1428571428571, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI28571526, Length=207, Percent_Identity=28.0193236714976, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21357041, Length=208, Percent_Identity=26.4423076923077, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI21356301, Length=215, Percent_Identity=23.7209302325581, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI24665243, Length=218, Percent_Identity=28.4403669724771, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI221331218, Length=218, Percent_Identity=28.4403669724771, Blast_Score=65, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 34560; Mature: 34429
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00061 ADH_SHORT ; PS00089 RIBORED_LARGE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVQKTSIETPQNNDLNRRAVLAGVGTLGIAASATGAVHAQTETEGNVMENGMLAGKVAL CCCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCEEEECCCCCCHHHCCEEECEEEE VTGAARGIGLSVAKTYGRHGAKVVMLDIADPSAVPPVEGFRIANAEEFQAAIEEVRAIAP EECCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHCCC DTLGITADVRDRAALANAVAQATETFGGLDIAVANAGYVRWHGFADGTEEDWKSVYDVNV CCCEEEECHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCHHHHHHEEEEEE HGVFNTFYAAIPALRQRGGGSLISLSSIAGRIGVIGNGAYNSSKWAVIGMTKQAALELGA HHHHHHHHHHHHHHHHCCCCCEEEHHHHCCEEEEEECCCCCCCCEEEEECCHHHHHHHCH DHIRANAIAPGPVNTPMYRSEGQKRSMGIDVAALSEVEANAAQDAMLNPALPLGETPASE HHHCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PQAIANTALYLASDLSADVSGAVLDTALGYNANYTG CHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure TVQKTSIETPQNNDLNRRAVLAGVGTLGIAASATGAVHAQTETEGNVMENGMLAGKVAL CCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCEEEECCCCCCHHHCCEEECEEEE VTGAARGIGLSVAKTYGRHGAKVVMLDIADPSAVPPVEGFRIANAEEFQAAIEEVRAIAP EECCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHCCC DTLGITADVRDRAALANAVAQATETFGGLDIAVANAGYVRWHGFADGTEEDWKSVYDVNV CCCEEEECHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCHHHHHHEEEEEE HGVFNTFYAAIPALRQRGGGSLISLSSIAGRIGVIGNGAYNSSKWAVIGMTKQAALELGA HHHHHHHHHHHHHHHHCCCCCEEEHHHHCCEEEEEECCCCCCCCEEEEECCHHHHHHHCH DHIRANAIAPGPVNTPMYRSEGQKRSMGIDVAALSEVEANAAQDAMLNPALPLGETPASE HHHCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PQAIANTALYLASDLSADVSGAVLDTALGYNANYTG CHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]