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The map label for this gene is yfiH [H]

Identifier: 89053953

GI number: 89053953

Start: 1431171

End: 1432085

Strand: Direct

Name: yfiH [H]

Synonym: Jann_1462

Alternate gene names: 89053953

Gene position: 1431171-1432085 (Clockwise)

Preceding gene: 89053952

Following gene: 89053954

Centisome position: 33.14

GC content: 54.64

Gene sequence:

>915_bases
ATGGAAATGGGGATATTAACTGCTCCGTTTGAGGATCTGGACCTGACCGAGGTCGCGTCCTGGGCCGGAGAGAACGGATT
TTCGGCGATGGAGGTGGCGTGCTGGCCTGCCTCGGGCGGGGAAAAGCGCCGCTATGCGGGAACGTCTCACATTGATGTGG
ATAACTTATCCACAGATCAGGCTGCTGATATCTTGGGGCTATTGACGGAGCAGGGGATAAGTATCTCGGGTCTGGGATAT
TATCCCAACCCGCTCCATGCGGATCAGGATCACCGTGATGATGTGATCGGCCACCTGATGAAGGTGATCACTGCCGCCAG
TACATTGGGCGTGCCGGTCGTTAACACATTCGTCGGTGGCGATCGTACGCAGACTGTTGACGATAACTGGACCCGTGCGA
TTGAGATCTTCAATCCCATCGTGGCCCATGCGCAAGCGTCGGGCGTGCGCCTGTGTTTTGAGAATTGCCCAATGATCTTT
AGCTATGACGAATGGCCGGGCGGTCACAACATCGCCTATAGTCCAAAGATTTGGCGGCGGATTTTCGAGCAATGGGGCGA
GGCGGTCGGGATGAACTTTGATCCCTCGCATCTGATCTGGCAGTTCATCGATCAGACCCGCTTCATTAAGGAATTTGGCG
AACATATGGCCCATGTCCACGCCAAAGACGTGATGGTTGACTGCGATGGGCTTTATGACAACGGGACGATGTCCACGGGT
ATGGGTTGGCAAATCCCACGCCTTTGCGGGCTGGGTGATGTCGATTGGAGCGGTTTTTTCGCAGGTCTTTATCGCGCGGG
TTATGATGGTCCCGTCATCATTGAACATGAGGATCGGGATTTCGAGGGCACGCAGGAGCGTGTGAAGCGTGGCTTTCTGC
TCGCTCGTGACGTGTTAAAGCCATACATCAAGTAA

Upstream 100 bases:

>100_bases
CCTTTGAAGACGGTCATTACGAGATGCGGTTTTGCGACGCCGTGGTGGTGTCTGCGAGGGAAGAGCGTTGGGTGCGGTTG
GACGAGGTCGGAGGTTAACC

Downstream 100 bases:

>100_bases
GCTGAGTAATCATCTGATAAATATCGTTTAACAAGGGAGAAGAGACCAATGAAACGACTTCTGACAACAGCTGCTGCGCT
GGCCATGATGGCCCCCGCCG

Product: xylose isomerase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MEMGILTAPFEDLDLTEVASWAGENGFSAMEVACWPASGGEKRRYAGTSHIDVDNLSTDQAADILGLLTEQGISISGLGY
YPNPLHADQDHRDDVIGHLMKVITAASTLGVPVVNTFVGGDRTQTVDDNWTRAIEIFNPIVAHAQASGVRLCFENCPMIF
SYDEWPGGHNIAYSPKIWRRIFEQWGEAVGMNFDPSHLIWQFIDQTRFIKEFGEHMAHVHAKDVMVDCDGLYDNGTMSTG
MGWQIPRLCGLGDVDWSGFFAGLYRAGYDGPVIIEHEDRDFEGTQERVKRGFLLARDVLKPYIK

Sequences:

>Translated_304_residues
MEMGILTAPFEDLDLTEVASWAGENGFSAMEVACWPASGGEKRRYAGTSHIDVDNLSTDQAADILGLLTEQGISISGLGY
YPNPLHADQDHRDDVIGHLMKVITAASTLGVPVVNTFVGGDRTQTVDDNWTRAIEIFNPIVAHAQASGVRLCFENCPMIF
SYDEWPGGHNIAYSPKIWRRIFEQWGEAVGMNFDPSHLIWQFIDQTRFIKEFGEHMAHVHAKDVMVDCDGLYDNGTMSTG
MGWQIPRLCGLGDVDWSGFFAGLYRAGYDGPVIIEHEDRDFEGTQERVKRGFLLARDVLKPYIK
>Mature_304_residues
MEMGILTAPFEDLDLTEVASWAGENGFSAMEVACWPASGGEKRRYAGTSHIDVDNLSTDQAADILGLLTEQGISISGLGY
YPNPLHADQDHRDDVIGHLMKVITAASTLGVPVVNTFVGGDRTQTVDDNWTRAIEIFNPIVAHAQASGVRLCFENCPMIF
SYDEWPGGHNIAYSPKIWRRIFEQWGEAVGMNFDPSHLIWQFIDQTRFIKEFGEHMAHVHAKDVMVDCDGLYDNGTMSTG
MGWQIPRLCGLGDVDWSGFFAGLYRAGYDGPVIIEHEDRDFEGTQERVKRGFLLARDVLKPYIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011418
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2; PF07582 AP_endonuc_2_N [H]

EC number: NA

Molecular weight: Translated: 33894; Mature: 33894

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMGILTAPFEDLDLTEVASWAGENGFSAMEVACWPASGGEKRRYAGTSHIDVDNLSTDQ
CCCCCEECCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHH
AADILGLLTEQGISISGLGYYPNPLHADQDHRDDVIGHLMKVITAASTLGVPVVNTFVGG
HHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
DRTQTVDDNWTRAIEIFNPIVAHAQASGVRLCFENCPMIFSYDEWPGGHNIAYSPKIWRR
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHCCCEEEEECCCCCCCCCEECHHHHHH
IFEQWGEAVGMNFDPSHLIWQFIDQTRFIKEFGEHMAHVHAKDVMVDCDGLYDNGTMSTG
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCC
MGWQIPRLCGLGDVDWSGFFAGLYRAGYDGPVIIEHEDRDFEGTQERVKRGFLLARDVLK
CCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
PYIK
HHCC
>Mature Secondary Structure
MEMGILTAPFEDLDLTEVASWAGENGFSAMEVACWPASGGEKRRYAGTSHIDVDNLSTDQ
CCCCCEECCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHH
AADILGLLTEQGISISGLGYYPNPLHADQDHRDDVIGHLMKVITAASTLGVPVVNTFVGG
HHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
DRTQTVDDNWTRAIEIFNPIVAHAQASGVRLCFENCPMIFSYDEWPGGHNIAYSPKIWRR
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHCCCEEEEECCCCCCCCCEECHHHHHH
IFEQWGEAVGMNFDPSHLIWQFIDQTRFIKEFGEHMAHVHAKDVMVDCDGLYDNGTMSTG
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCC
MGWQIPRLCGLGDVDWSGFFAGLYRAGYDGPVIIEHEDRDFEGTQERVKRGFLLARDVLK
CCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
PYIK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377; 8704981 [H]