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The map label for this gene is ytfQ [C]

Identifier: 89053954

GI number: 89053954

Start: 1432134

End: 1433150

Strand: Direct

Name: ytfQ [C]

Synonym: Jann_1463

Alternate gene names: 89053954

Gene position: 1432134-1433150 (Clockwise)

Preceding gene: 89053953

Following gene: 89053955

Centisome position: 33.17

GC content: 61.26

Gene sequence:

>1017_bases
ATGAAACGACTTCTGACAACAGCTGCTGCGCTGGCCATGATGGCCCCCGCCGCCTACGCCGACGGTCACGCGGCGTATAC
TATCGGCGTATCCAACACGGTACAGGGCAACGGGTGGCGCGAGCAGATGATTTGCGCCATGCGCGCCCAGGCTGCCGCTG
AGGGCGATGTCGAGGGATTGATCGTTGCGCATCGCAATACCGACGCCGCGGGGCAGCTGGAGGACCTGAACAACCTGATC
GAGGCGGGCGTTGACGCCATCGTTCTGAACCCTGCAAACCCCGAAGCGCTGAACTCCGCTCTGGATGCGGCGATTGCCGC
AGGGATCGTTGTGGTCGCGGTGGACGCCGGTGTGACAGCTGAAGGCGCCTACATCTTGTCTAACAACCAGGAAGAATACG
CATATCTTGGTGCGCGTTGGTTGTTTGAGCAGATCGGTGGCGAGGGCGACGTCGTCTACATGCGTGGGATCGCAGGCGTC
TCGGCCGATACCGACCGCGACAACGGGTTTCAGCGCGCGTTGGCGGAGTATCCGAACGTTAACGTCATTCATGAGGTTTT
CACCGGTTGGCAACAGGACCAGGGCAAGCAGCAGATGTTTGATTTTCTGGCCACAGGCATCCCCTTCGATGGGGTCTGGA
CGTCTGGGATCGACAACGTGATTGTAGATGCCTTTGTCGAGTCCGGTGCGCCGCTGGTGCCGATTGTTGGGGCCGACAAT
GCAGGTTTTGTGCAGTATCTTGCCGAGACCGAGGGCCTTGAAGGCGCAGCGGTGACCAACCCCGGATCCGTCGGCGGGGC
GGGCATCGCCTTGGCGGTCGACATCCTGAATGGCGACGCGCCCGATGAGACGACGGTGCTGGTGGACCCAGTTCTTTGGG
AAAATACGACCGCCGAGGGGCAGGAAGTCATTGCCGGTGCTCTGAATCCCGATCTGGACCCCGAATGGCCGGTGTCTGTG
TCTATCCCGGGCTGGACCGACTACTCCATGGCCGACATCATCGCCTGCGAAGGCTGA

Upstream 100 bases:

>100_bases
GAAGCGTGGCTTTCTGCTCGCTCGTGACGTGTTAAAGCCATACATCAAGTAAGCTGAGTAATCATCTGATAAATATCGTT
TAACAAGGGAGAAGAGACCA

Downstream 100 bases:

>100_bases
CCTGACAATGTGGCGTTCTGACATCAATTTGTCAGAACGCCATGACGGTCTGTTCGCTATTCGTCAGATTGCGACGAGCG
AATCAGAAATATAATAAAAT

Product: ribose binding protein of ABC transporter

Products: NA

Alternate protein names: Sugar ABC Transporter Periplasmic Component-Like Protein; Ribose ABC Transporter; Sugar ABC Transporter Periplasmic Protein; D-Ribose ABC Transporter Permease; AraC Family Transcriptional Regulator

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MKRLLTTAAALAMMAPAAYADGHAAYTIGVSNTVQGNGWREQMICAMRAQAAAEGDVEGLIVAHRNTDAAGQLEDLNNLI
EAGVDAIVLNPANPEALNSALDAAIAAGIVVVAVDAGVTAEGAYILSNNQEEYAYLGARWLFEQIGGEGDVVYMRGIAGV
SADTDRDNGFQRALAEYPNVNVIHEVFTGWQQDQGKQQMFDFLATGIPFDGVWTSGIDNVIVDAFVESGAPLVPIVGADN
AGFVQYLAETEGLEGAAVTNPGSVGGAGIALAVDILNGDAPDETTVLVDPVLWENTTAEGQEVIAGALNPDLDPEWPVSV
SIPGWTDYSMADIIACEG

Sequences:

>Translated_338_residues
MKRLLTTAAALAMMAPAAYADGHAAYTIGVSNTVQGNGWREQMICAMRAQAAAEGDVEGLIVAHRNTDAAGQLEDLNNLI
EAGVDAIVLNPANPEALNSALDAAIAAGIVVVAVDAGVTAEGAYILSNNQEEYAYLGARWLFEQIGGEGDVVYMRGIAGV
SADTDRDNGFQRALAEYPNVNVIHEVFTGWQQDQGKQQMFDFLATGIPFDGVWTSGIDNVIVDAFVESGAPLVPIVGADN
AGFVQYLAETEGLEGAAVTNPGSVGGAGIALAVDILNGDAPDETTVLVDPVLWENTTAEGQEVIAGALNPDLDPEWPVSV
SIPGWTDYSMADIIACEG
>Mature_338_residues
MKRLLTTAAALAMMAPAAYADGHAAYTIGVSNTVQGNGWREQMICAMRAQAAAEGDVEGLIVAHRNTDAAGQLEDLNNLI
EAGVDAIVLNPANPEALNSALDAAIAAGIVVVAVDAGVTAEGAYILSNNQEEYAYLGARWLFEQIGGEGDVVYMRGIAGV
SADTDRDNGFQRALAEYPNVNVIHEVFTGWQQDQGKQQMFDFLATGIPFDGVWTSGIDNVIVDAFVESGAPLVPIVGADN
AGFVQYLAETEGLEGAAVTNPGSVGGAGIALAVDILNGDAPDETTVLVDPVLWENTTAEGQEVIAGALNPDLDPEWPVSV
SIPGWTDYSMADIIACEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35211; Mature: 35211

Theoretical pI: Translated: 3.58; Mature: 3.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLTTAAALAMMAPAAYADGHAAYTIGVSNTVQGNGWREQMICAMRAQAAAEGDVEGL
CCHHHHHHHHHHHHCCHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEE
IVAHRNTDAAGQLEDLNNLIEAGVDAIVLNPANPEALNSALDAAIAAGIVVVAVDAGVTA
EEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEEEECCCCC
EGAYILSNNQEEYAYLGARWLFEQIGGEGDVVYMRGIAGVSADTDRDNGFQRALAEYPNV
CCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCC
NVIHEVFTGWQQDQGKQQMFDFLATGIPFDGVWTSGIDNVIVDAFVESGAPLVPIVGADN
CHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCC
AGFVQYLAETEGLEGAAVTNPGSVGGAGIALAVDILNGDAPDETTVLVDPVLWENTTAEG
CHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEEECCCCCCCCEEEECCEEECCCCCCC
QEVIAGALNPDLDPEWPVSVSIPGWTDYSMADIIACEG
HHHHEECCCCCCCCCCCEEEECCCCCCCCHHHEEEECC
>Mature Secondary Structure
MKRLLTTAAALAMMAPAAYADGHAAYTIGVSNTVQGNGWREQMICAMRAQAAAEGDVEGL
CCHHHHHHHHHHHHCCHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEE
IVAHRNTDAAGQLEDLNNLIEAGVDAIVLNPANPEALNSALDAAIAAGIVVVAVDAGVTA
EEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEEEECCCCC
EGAYILSNNQEEYAYLGARWLFEQIGGEGDVVYMRGIAGVSADTDRDNGFQRALAEYPNV
CCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCC
NVIHEVFTGWQQDQGKQQMFDFLATGIPFDGVWTSGIDNVIVDAFVESGAPLVPIVGADN
CHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCC
AGFVQYLAETEGLEGAAVTNPGSVGGAGIALAVDILNGDAPDETTVLVDPVLWENTTAEG
CHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEEECCCCCCCCEEEECCEEECCCCCCC
QEVIAGALNPDLDPEWPVSVSIPGWTDYSMADIIACEG
HHHHEECCCCCCCCCCCEEEECCCCCCCCHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA