Click here to switch to the map view.

The map label for this gene is 89053919

Identifier: 89053919

GI number: 89053919

Start: 1397840

End: 1398988

Strand: Direct

Name: 89053919

Synonym: Jann_1428

Alternate gene names: NA

Gene position: 1397840-1398988 (Clockwise)

Preceding gene: 89053918

Following gene: 89053920

Centisome position: 32.37

GC content: 66.93

Gene sequence:

>1149_bases
ATGGGAGGCGGCTACTACGACGGGGGCAGCGGCACGCTGGAGGAGTTCGCCGCCCTCTGCGCGCGGGCGCTAGACCCGGC
GCAGGTGCCCTTTGCCGCCGGTGTCGAGGCCAATATCCCGATCTATGATATGCCCGCTTTGGCGGGGGGTGTGTCGGCCG
ATCCGGCACAGCGCCGGGCGCTGATGGCGGAATGGGCCTGGGTGTTGGGCCAGGCCTCCGGCACTCTGGTGTTGCGACAG
GCGCAGCCGGATCACGGGGCGATTGATCGCGCCTCCGATGTGTTCGATCAGATCATCACGGATGAGGCCGCAGGCGGCGC
AAAGGCTGATCATTTTGCGGCGGCGGGGGCCAATTCCCGCATCTGGAACGCGCTGGAGAAGCATTGCCTGGCCGACCCGG
AGGGGTTCGCGCGCTACTACGGCGCGCCGGGCGTGGAGGCGGTGGCGGAGGCCTGGCTTGGTCCGGCCTTCCAGATGACC
GCGCAGGTCAACGTCGTGCGCCCCGGGGGACAGGCGCAGGTGGCGCATCGGGATTACCATTTGGGGTTTCAGACGGCGGA
GGTCGCGGCCCAGTTCCCGCCCCATGTCCATGAGTTGAGCCAGGTCATGACGTTGCAGGGGGCGCTGGCCCATTGCGACA
TGCCGCTGGACAGCGGGCCGACAAAGCTGCTGCCGTTCAGCCAGCTCTTCGCGGAAGGTTATATGGCGTATCGCCGCCCG
GACTTTGCCGCGTTCTTTGAAGATCACTACGTGCAGATGCCGCTGGAGAAGGGCGACGGGCTGTTCTTCAACCCTGCGCT
GTTTCACGGGGCGGGGGCGAATACCTCGCGCGATATCCAGCGGATGGCGAACCTGTTGCAGGTCTCCTCGGCCTTTGGGC
GCGCGATGGAGGCGATTGACCGCCGCGCGATGTGCAAAGCGCTCTATCCGGTGATCGGCTGTGTCGATGGCGCGCGGCGC
AGGGCGGCAATTGCCTGCGCGGCGGAGGGCTATGCGTTTCCCACCAACCTCGACACTGATCCCCCCAGCGGAGGACTTGC
GCCCGAGAGCATGGCGCAGCTCTTTCGGCGGGCGCTGCAAGAGGGCATGGTGCCGGAGCAGTTTAACGCTGCGCTGGATG
CGCAGGCAGAGAGGCGGAACGGTGGCTGA

Upstream 100 bases:

>100_bases
CAGCCCAGAAGGGGGAGATCACGCCGGAAGAGCTGCAGGACCTGATGGCCGGTGGTCAGGAGATGGCGCAGCTGGAAGGC
TCCCTCGGCGGAACCGTGTG

Downstream 100 bases:

>100_bases
TCTTCTATGCAAACCCGAGGGGACGACCGGGCGGGTCCACGGGATCACGCCGGAGCGCGCGGGCTGGACCTATGTGGGGT
TCGACCTGTGGCATCTGGCC

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: Phytanoyl-CoA Dioxygenase Family; Phytanoyl-CoA Dioxygenase Protein

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MGGGYYDGGSGTLEEFAALCARALDPAQVPFAAGVEANIPIYDMPALAGGVSADPAQRRALMAEWAWVLGQASGTLVLRQ
AQPDHGAIDRASDVFDQIITDEAAGGAKADHFAAAGANSRIWNALEKHCLADPEGFARYYGAPGVEAVAEAWLGPAFQMT
AQVNVVRPGGQAQVAHRDYHLGFQTAEVAAQFPPHVHELSQVMTLQGALAHCDMPLDSGPTKLLPFSQLFAEGYMAYRRP
DFAAFFEDHYVQMPLEKGDGLFFNPALFHGAGANTSRDIQRMANLLQVSSAFGRAMEAIDRRAMCKALYPVIGCVDGARR
RAAIACAAEGYAFPTNLDTDPPSGGLAPESMAQLFRRALQEGMVPEQFNAALDAQAERRNGG

Sequences:

>Translated_382_residues
MGGGYYDGGSGTLEEFAALCARALDPAQVPFAAGVEANIPIYDMPALAGGVSADPAQRRALMAEWAWVLGQASGTLVLRQ
AQPDHGAIDRASDVFDQIITDEAAGGAKADHFAAAGANSRIWNALEKHCLADPEGFARYYGAPGVEAVAEAWLGPAFQMT
AQVNVVRPGGQAQVAHRDYHLGFQTAEVAAQFPPHVHELSQVMTLQGALAHCDMPLDSGPTKLLPFSQLFAEGYMAYRRP
DFAAFFEDHYVQMPLEKGDGLFFNPALFHGAGANTSRDIQRMANLLQVSSAFGRAMEAIDRRAMCKALYPVIGCVDGARR
RAAIACAAEGYAFPTNLDTDPPSGGLAPESMAQLFRRALQEGMVPEQFNAALDAQAERRNGG
>Mature_381_residues
GGGYYDGGSGTLEEFAALCARALDPAQVPFAAGVEANIPIYDMPALAGGVSADPAQRRALMAEWAWVLGQASGTLVLRQA
QPDHGAIDRASDVFDQIITDEAAGGAKADHFAAAGANSRIWNALEKHCLADPEGFARYYGAPGVEAVAEAWLGPAFQMTA
QVNVVRPGGQAQVAHRDYHLGFQTAEVAAQFPPHVHELSQVMTLQGALAHCDMPLDSGPTKLLPFSQLFAEGYMAYRRPD
FAAFFEDHYVQMPLEKGDGLFFNPALFHGAGANTSRDIQRMANLLQVSSAFGRAMEAIDRRAMCKALYPVIGCVDGARRR
AAIACAAEGYAFPTNLDTDPPSGGLAPESMAQLFRRALQEGMVPEQFNAALDAQAERRNGG

Specific function: Unknown

COG id: COG5285

COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40746; Mature: 40615

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGGYYDGGSGTLEEFAALCARALDPAQVPFAAGVEANIPIYDMPALAGGVSADPAQRRA
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCHHCCCCCCCHHHHHH
LMAEWAWVLGQASGTLVLRQAQPDHGAIDRASDVFDQIITDEAAGGAKADHFAAAGANSR
HHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHH
IWNALEKHCLADPEGFARYYGAPGVEAVAEAWLGPAFQMTAQVNVVRPGGQAQVAHRDYH
HHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCEEECCHHH
LGFQTAEVAAQFPPHVHELSQVMTLQGALAHCDMPLDSGPTKLLPFSQLFAEGYMAYRRP
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
DFAAFFEDHYVQMPLEKGDGLFFNPALFHGAGANTSRDIQRMANLLQVSSAFGRAMEAID
CHHHHHHCCCEEEEHCCCCCCEECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RRAMCKALYPVIGCVDGARRRAAIACAAEGYAFPTNLDTDPPSGGLAPESMAQLFRRALQ
HHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
EGMVPEQFNAALDAQAERRNGG
HCCCCHHHHHHHHCHHHHCCCC
>Mature Secondary Structure 
GGGYYDGGSGTLEEFAALCARALDPAQVPFAAGVEANIPIYDMPALAGGVSADPAQRRA
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCHHCCCCCCCHHHHHH
LMAEWAWVLGQASGTLVLRQAQPDHGAIDRASDVFDQIITDEAAGGAKADHFAAAGANSR
HHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHH
IWNALEKHCLADPEGFARYYGAPGVEAVAEAWLGPAFQMTAQVNVVRPGGQAQVAHRDYH
HHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCEEECCHHH
LGFQTAEVAAQFPPHVHELSQVMTLQGALAHCDMPLDSGPTKLLPFSQLFAEGYMAYRRP
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
DFAAFFEDHYVQMPLEKGDGLFFNPALFHGAGANTSRDIQRMANLLQVSSAFGRAMEAID
CHHHHHHCCCEEEEHCCCCCCEECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RRAMCKALYPVIGCVDGARRRAAIACAAEGYAFPTNLDTDPPSGGLAPESMAQLFRRALQ
HHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
EGMVPEQFNAALDAQAERRNGG
HCCCCHHHHHHHHCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA