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The map label for this gene is iolB [H]

Identifier: 89053920

GI number: 89053920

Start: 1398957

End: 1399775

Strand: Direct

Name: iolB [H]

Synonym: Jann_1429

Alternate gene names: 89053920

Gene position: 1398957-1399775 (Clockwise)

Preceding gene: 89053919

Following gene: 89053921

Centisome position: 32.4

GC content: 67.4

Gene sequence:

>819_bases
ATGCGCAGGCAGAGAGGCGGAACGGTGGCTGATCTTCTATGCAAACCCGAGGGGACGACCGGGCGGGTCCACGGGATCAC
GCCGGAGCGCGCGGGCTGGACCTATGTGGGGTTCGACCTGTGGCATCTGGCCCCGGGGGAGGTGGCCGAGGGCGGCGACG
CGGGGCGCGAAGTGATCCTCGTGGTCGTGGAGGGGCGGGTGAGCGCCTCGGGCGGCGGCGTGGAGTTTGGCGAGATCGGC
GCGCGGATGAGCGTGTGGGAGAAGACGCCGCCTGCCTGTGTCTATGTGCCAGCGGGGGCGGGTTGGCGCGCGGAGGCTGT
GACCGATTGCGTGGTGGCCGTCTGCTCCGCACCCGGGGATGGCACGCGACCGGCGCAGGCGCTGGGGCCCGACGGCATCG
CGATGGAAGACCGGGGCGAGGGCACCAACCTGCGCCACATCCACAACATCGCCATGGAAGGCCGCGACGTGGCCGACAGC
CTGCTGGTCACGGAAGTGTTTACCCCCGCGGGCCATTGGTCGAGCTACCCGCCGCACCGCCATGACGAGGATGATTTTCC
GCGCATCACGCATCTGGAAGAGACCTATTATCACCGCTTGAACCCGGGCACGGGCTTTGGCGTGCAGCGGGTGTTCACGG
AAGACGGGGCACTGGATGAGACGATGGCAGTGAGCGATGGCGACGTGGTCTTGGTGCCGCGCGGGCATCATCCCTGCGGC
GCGCCTTACGGGGTTGAGATGTATTACCTGAACGTCATGGCGGGGCCGCTCAGGAAATGGCGCTTCGCGGCGCATCCGGA
TTTTGAGCATTTGTTGTAG

Upstream 100 bases:

>100_bases
GATCCCCCCAGCGGAGGACTTGCGCCCGAGAGCATGGCGCAGCTCTTTCGGCGGGCGCTGCAAGAGGGCATGGTGCCGGA
GCAGTTTAACGCTGCGCTGG

Downstream 100 bases:

>100_bases
TGCGTCCGGCCTGCGGTCGACTTGAGAGCGGGGTATCGCGCTGCGCGCGCGGCCCCTCCGCGCGGGCTGCGCCCGCTTCT
CGGCGCGGTTTTGTGGCGAT

Product: myo-inositol catabolism IolB protein

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MRRQRGGTVADLLCKPEGTTGRVHGITPERAGWTYVGFDLWHLAPGEVAEGGDAGREVILVVVEGRVSASGGGVEFGEIG
ARMSVWEKTPPACVYVPAGAGWRAEAVTDCVVAVCSAPGDGTRPAQALGPDGIAMEDRGEGTNLRHIHNIAMEGRDVADS
LLVTEVFTPAGHWSSYPPHRHDEDDFPRITHLEETYYHRLNPGTGFGVQRVFTEDGALDETMAVSDGDVVLVPRGHHPCG
APYGVEMYYLNVMAGPLRKWRFAAHPDFEHLL

Sequences:

>Translated_272_residues
MRRQRGGTVADLLCKPEGTTGRVHGITPERAGWTYVGFDLWHLAPGEVAEGGDAGREVILVVVEGRVSASGGGVEFGEIG
ARMSVWEKTPPACVYVPAGAGWRAEAVTDCVVAVCSAPGDGTRPAQALGPDGIAMEDRGEGTNLRHIHNIAMEGRDVADS
LLVTEVFTPAGHWSSYPPHRHDEDDFPRITHLEETYYHRLNPGTGFGVQRVFTEDGALDETMAVSDGDVVLVPRGHHPCG
APYGVEMYYLNVMAGPLRKWRFAAHPDFEHLL
>Mature_272_residues
MRRQRGGTVADLLCKPEGTTGRVHGITPERAGWTYVGFDLWHLAPGEVAEGGDAGREVILVVVEGRVSASGGGVEFGEIG
ARMSVWEKTPPACVYVPAGAGWRAEAVTDCVVAVCSAPGDGTRPAQALGPDGIAMEDRGEGTNLRHIHNIAMEGRDVADS
LLVTEVFTPAGHWSSYPPHRHDEDDFPRITHLEETYYHRLNPGTGFGVQRVFTEDGALDETMAVSDGDVVLVPRGHHPCG
APYGVEMYYLNVMAGPLRKWRFAAHPDFEHLL

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 29405; Mature: 29405

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRQRGGTVADLLCKPEGTTGRVHGITPERAGWTYVGFDLWHLAPGEVAEGGDAGREVIL
CCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEE
VVVEGRVSASGGGVEFGEIGARMSVWEKTPPACVYVPAGAGWRAEAVTDCVVAVCSAPGD
EEEECEEECCCCCEEHHHHCCEEEHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC
GTRPAQALGPDGIAMEDRGEGTNLRHIHNIAMEGRDVADSLLVTEVFTPAGHWSSYPPHR
CCCCHHHCCCCCCEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC
HDEDDFPRITHLEETYYHRLNPGTGFGVQRVFTEDGALDETMAVSDGDVVLVPRGHHPCG
CCCCCCCCHHHHHHHHHEECCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEECCCCCCC
APYGVEMYYLNVMAGPLRKWRFAAHPDFEHLL
CCCCEEEEEEEEHHCCHHHCEECCCCCHHHCC
>Mature Secondary Structure
MRRQRGGTVADLLCKPEGTTGRVHGITPERAGWTYVGFDLWHLAPGEVAEGGDAGREVIL
CCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEE
VVVEGRVSASGGGVEFGEIGARMSVWEKTPPACVYVPAGAGWRAEAVTDCVVAVCSAPGD
EEEECEEECCCCCEEHHHHCCEEEHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC
GTRPAQALGPDGIAMEDRGEGTNLRHIHNIAMEGRDVADSLLVTEVFTPAGHWSSYPPHR
CCCCHHHCCCCCCEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC
HDEDDFPRITHLEETYYHRLNPGTGFGVQRVFTEDGALDETMAVSDGDVVLVPRGHHPCG
CCCCCCCCHHHHHHHHHEECCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEECCCCCCC
APYGVEMYYLNVMAGPLRKWRFAAHPDFEHLL
CCCCEEEEEEEEHHCCHHHCEECCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA